Literature DB >> 22508108

Out of fuzzy chemistry: from prebiotic chemistry to metabolic networks.

Juli Peretó1.   

Abstract

The origin of life on Earth was a chemical affair. So how did primitive biochemical systems originate from geochemical and cosmochemical processes on the young planet? Contemporary research into the origins of life subscribes to the Darwinian principle of material causes operating in an evolutionary context, as advocated by A. I. Oparin and J. B. S. Haldane in the 1920s. In its simplest form (e.g., a bacterial cell) extant biological complexity relies on the functional integration of metabolic networks and replicative genomes inside a lipid boundary. Different research programmes have explored the prebiotic plausibility of each of these autocatalytic subsystems and combinations thereof: self-maintained networks of small molecules, template chemistry, and self-reproductive vesicles. This tutorial review focuses on the debates surrounding the origin of metabolism and offers a brief overview of current studies on the evolution of metabolic networks. I suggest that a leitmotif in the origin and evolution of metabolism is the role played by catalysers' substrate ambiguity and multifunctionality.

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Mesh:

Year:  2012        PMID: 22508108     DOI: 10.1039/c2cs35054h

Source DB:  PubMed          Journal:  Chem Soc Rev        ISSN: 0306-0012            Impact factor:   54.564


  23 in total

1.  The Semi-Enzymatic Origin of Metabolic Pathways: Inferring a Very Early Stage of the Evolution of Life.

Authors:  Arturo Becerra
Journal:  J Mol Evol       Date:  2021-01-28       Impact factor: 2.395

2.  Methanogenesis on Early Stages of Life: Ancient but Not Primordial.

Authors:  Israel Muñoz-Velasco; Carlos García-Ferris; Ricardo Hernandez-Morales; Antonio Lazcano; Juli Peretó; Arturo Becerra
Journal:  Orig Life Evol Biosph       Date:  2019-01-05       Impact factor: 1.950

Review 3.  Synthetic transitions: towards a new synthesis.

Authors:  Ricard Solé
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2016-08-19       Impact factor: 6.237

4.  The major synthetic evolutionary transitions.

Authors:  Ricard Solé
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2016-08-19       Impact factor: 6.237

5.  Bulk measurements of messy chemistries are needed for a theory of the origins of life.

Authors:  Nicholas Guttenberg; Nathaniel Virgo; Kuhan Chandru; Caleb Scharf; Irena Mamajanov
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2017-12-28       Impact factor: 4.226

6.  Evolutionary history of carbon monoxide dehydrogenase/acetyl-CoA synthase, one of the oldest enzymatic complexes.

Authors:  Panagiotis S Adam; Guillaume Borrel; Simonetta Gribaldo
Journal:  Proc Natl Acad Sci U S A       Date:  2018-01-22       Impact factor: 11.205

7.  Structural phylogenomics reveals gradual evolutionary replacement of abiotic chemistries by protein enzymes in purine metabolism.

Authors:  Kelsey Caetano-Anollés; Gustavo Caetano-Anollés
Journal:  PLoS One       Date:  2013-03-13       Impact factor: 3.240

8.  Metabolic evolution of a deep-branching hyperthermophilic chemoautotrophic bacterium.

Authors:  Rogier Braakman; Eric Smith
Journal:  PLoS One       Date:  2014-02-05       Impact factor: 3.240

9.  Conditional iron and pH-dependent activity of a non-enzymatic glycolysis and pentose phosphate pathway.

Authors:  Markus A Keller; Andre Zylstra; Cecilia Castro; Alexandra V Turchyn; Julian L Griffin; Markus Ralser
Journal:  Sci Adv       Date:  2016-01-15       Impact factor: 14.136

Review 10.  Towards an evolutionary theory of the origin of life based on kinetics and thermodynamics.

Authors:  Robert Pascal; Addy Pross; John D Sutherland
Journal:  Open Biol       Date:  2013-11-06       Impact factor: 6.411

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