| Literature DB >> 29088063 |
Yahui Han1, Keyi Huang2, Yajun Liu3, Tianming Jiao4, Guoliang Ma5, Yumei Qian6, Peiqiang Wang7, Xinlong Dai8, Liping Gao9, Tao Xia10.
Abstract
Entities:
Keywords: Camellia sinensis; flavanone-3-hydroxylase; flavonoids; gene function
Year: 2017 PMID: 29088063 PMCID: PMC5704213 DOI: 10.3390/genes8110300
Source DB: PubMed Journal: Genes (Basel) ISSN: 2073-4425 Impact factor: 4.096
The basic information of two CsF3H genes.
| Gene Name | Accession Number | Mw (kD) | cDNA Length (bp) | ORF length (bp) | 5′-UTR Length (bp) | 3′-UTR Length (bp) | Size (aa) | pI |
|---|---|---|---|---|---|---|---|---|
| KY615688 | 41.46 | 1256 | 1107 | 54 | 95 | 369 | 5.61 | |
| KY615689 | 39.92 | 1334 | 1071 | 84 | 179 | 357 | 5.23 |
aa: amino acids; Mw: Molecular weight; cDNA: complementary DNA; UTR: untranslated region; ORF: Open reading frame; pI: Isoelectric point.
Figure 1Multiple alignment of two CsF3H proteins with F3Hs from other plants. The blue and green symbols represent the iron binding sites and 2-oxoglutarate binding sites, respectively. The box represents the conserved area of the 2-oxoglutarate-dependent dioxygenase (2-ODD) family.
Figure 2Phylogenetic relationship of CsF3Hs with 2-ODD family members from other plants. CsF3Hs are indicated by points (●). The following sequences were analyzed: FaF3H (Fragaria ananassa, AY691918.1), AtF3H (Arabidopsis thaliana, At3g51240), PhF3H (Petunia hybrida, AF022142), GmF3H (Glycine max flavanone, AY595420.1), MtF3H (Medicago truncatula, FJ529406.1), AcF3H (Aethusa cynapium, DQ683351.1), AgF3H (Anethum graveolens, AY817679.1), PcF3H (Petroselinum crispum, AY230248.1), AmF3H (Ammi majus, AY817678.1), PaF3H (Pimpinella anisum, AY817674.1), CcFNS (Cuminum cyminum, DQ683349.1), DcFNS (Daucus carota, AY817675.1), AgFNS (Apium graveolens, AY817676.1), CmFNS (Conium maculatum, AY817677.1), AcFNS (Aethusa cynapium, DQ683350.1), AaFNS (Angelica archangelica, DQ683352), PaANS (Phytolacca americana, AB198870.1), SoANS (Spinacia oleracea, AB198869.1), FaANS (Fragaria x ananassa, AY695817.1), InANS (Ipomoea nil, AB073925.1), AcANS (Allium cepa, EF192598.1), OsANS(Oryza sativa, Y07955.1), GbANS (Ginkgo biloba, ACC66092.1), AtFLS1 (A. thaliana, At5g08640), AtFLS3 (A. thaliana, At5g63590), AtFLS5 (A. thaliana, At5g63600), CitFLS (Citrus unshiu, AB011796), FaFLS (Fragaria x ananassa, DQ087252.1), RhFLS (Rosa hybrida, AB038247.1), PcFLS (Petroselinum crispum, AY230249.1), PhFLS (Petunia hybrida, Z22543.1), TfFLS (Torenia fournieri, AB078512.1), DmH6H (Datura metel, AF435417), BcH6H (Brugmansia candida, EU530633.1), HnH6H (Hyoscyamus niger, M62719), AbH6H (Atropa baetica, EF442802), AacH6H (Anisodus acutangulus, EF187826), AtaH6H (Anisodus tanguticus, AY356396.1), AtGA3ox1 (A.thaliana, At1g15550), AtGA3ox2 (A.thaliana, At1g80340), AtGA3ox4 (A.thaliana, At1g80330), AtGA3ox3 (A.thaliana, At4g21690), SmGA3ox (Selaginella moellendorffii, ABX10776.1), AtGA2ox4 (A.thaliana, At1g47990), SmGA20ox (Selaginella moellendorffii, ABX10768.1), AtGA20ox5 (A.thaliana, At1g44090), CmGA20ox (Cucurbita maxima, AAB64345), AtGA20ox2 (A.thaliana, At5g51810), AtGA20ox3 (A.thaliana, At5g07200), and AtGA20ox4 (A. thaliana, At1g60980).
Figure 3Enzymatic reaction products analysis of recombinant CsF3H proteins. (A) The control of (B) and (C) without substrate. (B,C) spectrums of reaction products from Escherichia coli strains harboring recombinant CsF3Ha-MBP with naringenin (N) and eriodictyol (E) as the substrate, respectively. (D) The control of (E) and (F) without substrate. (E,F) spectra of reaction products from E. coli strains harboring recombinant CsF3Hb-MBP with N and E as the substrate, respectively. (G) Mixed standard samples, including N, E, dihydrokaempferol (DHK), and dihydroquercetin (DHQ). (H,I) Control treatments with E. coli strains harboring empty vectors using N and E as substrate, respectively. mAU: 10−3 Absorbance unit.
Figure 4Identification of the enzymatic products by ultra-performance liquid chromatography-tandem mass spectrometry (UPLC–MS/MS) analysis. The products from E. coli strains harboring CsF3Ha/b in the pMAL-c2X vector with (A) N and (B) E as substrate, respectively. The diamond marks present precursor ions of DHK and DHQ respectively.
Figure 5Semi-quantitative reverse transcription-polymerase chain reaction (RT-PCR) of CsF3Hs in diverse tissues of Camellia sinensis. Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) was used as the internal reference gene. The experiments were performed with three biological repeats.
Figure 6Relative expression patterns of two CsF3Hs under different abiotic stresses. (A) cold; (B) UV; (C,D) abscisic acid (ABA), jasmonic acid (JA), salicylic acid (SA), indolebutyric acid (IBA), NaCl, sucrose, and mannitol. All the data of real-time quantitative polymerase chain reaction (qPCR) were present based on three biological and technical repeats. Asterisk indicates significant difference compared with control samples (n = 3, * p < 0.05, ** p < 0.01, *** p < 0.001) based on a Tukey’s honestly significant difference test. Suc: Sucrose; Man: Mannitol.
Figure 7The accumulated flavonoid compounds in the seeds of transgenic (CsF3Ha/b) A.thaliana. Asterisk indicates significant difference compared with control samples (n = 3, * p < 0.05, ** p < 0.01, *** p < 0.001) based on a Tukey’s honestly significant difference test. G: Glucoside; H: Hexoside; I: Isorhamnetin; K: Kaempferol; Q: Quercetin; PA: Proanthocyanidin; R: Rhamnoside.