| Literature DB >> 29079854 |
Jiekai Yu1, Xiaohui Zhai1,2, Xiaofen Li1, Chenhan Zhong1, Cheng Guo1, Fuquan Yang3, Ying Yuan4, Shu Zheng5,6.
Abstract
Colorectal cancer (CRC) is a common malignant neoplasm worldwide. It is important to identify new biomarkers for the early detection of CRC. In this study, magnetic beads and the Matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF-MS) platform were used to analyse CRC and healthy control (HC) serum samples. The CRC diagnosis pattern was established to have a specificity of 94.7% and sensitivity of 92.3% in a blind test. The candidate biomarker serine/threonine kinase 4 (STK4, also known as MST1) was identified by Tandem mass spectrometry (MS/MS) and verified with western blotting and enzyme-linked immunosorbent assay (ELISA). The results indicated that there was a higher concentration of MST1 in HC subjects than stage I CRC patients for the early detection of CRC and a lower concentration in stage IV patients than in other CRC patients. The sensitivity and specificity of MST1 combined with carcinoembryonic antigen (CEA) and faecal occult blood test (FOBT) in diagnosis of colorectal cancer were 92.3% and 100%, respectively. Additionally, low MST1 expression was associated with the poor prognosis. These results illustrate that MST1 is a potential biomarker for early detection, prognosis and prediction of distant metastasis of CRC.Entities:
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Year: 2017 PMID: 29079854 PMCID: PMC5660227 DOI: 10.1038/s41598-017-14539-x
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Protein peaks selected for the pattern to compare CRC patients and HC samples.
| Biomarker (m/z) |
| Mean in HC for training | Mean in CRC for training | Mean in HC for testing | Mean in CRC for testing |
|---|---|---|---|---|---|
| 1781 | 9.45E-23 | 219.53 | 2314.12 | 141.80 | 2249.97 |
| 1868 | 1.37E-21 | 374.89 | 3534.34 | 208.64 | 2972.30 |
| 2084 | 4.09E-20 | 9603.80 | 1845.85 | 9406.46 | 1836.56 |
| 1694 | 4.95E-18 | 39.83 | 706.14 | 22.86 | 692.00 |
| 2886 | 1.24E-15 | 2775.09 | 1671.69 | 2544.17 | 1774.45 |
| 2073 | 4.57E-14 | 916.50 | 259.62 | 1104.23 | 244.11 |
| 4478 | 1.27E-13 | 4152.99 | 1557.13 | 3824.15 | 1390.04 |
Prediction results from the training and blind test cases using the established diagnosis pattern.
| Groups | Total samples | Prediction Results | Accuracy (%) | |||
|---|---|---|---|---|---|---|
| Correct cases | Misjudged cases | Sensitivity (%) | Specificity (%) | |||
| Training | HC | 63 | 62 | 1 | 98.4 | / |
| CRC | 89 | 88 | 1 | / | 98.9 | |
| Blind Test | HC | 26 | 24 | 2 | 92.3 | / |
| CRC | 38 | 36 | 2 | / | 94.7 | |
Figure 1Biomarker SVM patterns. (a) Scatter diagram of the cross-validation results from the training set. (b) Scatter diagram of the results from the blind test set (Group 0 and 1 represent the HC subjects and CRC patients). (c) MST1 (2084 Da) expressed at low levels in the CRC group (group 1) in the training sets by MALDI-TOF-MS. (d) MST1 (2084 Da) expressed at low levels in the group CRC (group 1) in the test sets by MALDI-TOF-MS.
Figure 2Purification and identification of MST1 (2084 Da). (a) Purification and detection data of the 2084 Da target biomarkers by MALDI-TOF-MS. (b) MS/MS spectra of K.GLEYLHFMR.K in the target biomarkers. (c) MS/MS spectra of R.AIFMIPTNPPPTFR in the target biomarkers.
Structure data of the target protein.
| Peptides identified |
| sf |
|---|---|---|
| K.GLEYLHFMR | 1.8E-004 | 0.81 |
| R.AIFMIPTNPPPTFR | 2.5E-005 | 0.85 |
The value of p indicates the probability of protein. The score of sf indicated the quality of match.
Figure 3Verification results of the MST1 protein. (a) Representative western blotting image of MST1 in the CRC and HC sera in one PVDF membrane. Full-length blots are presented in Supplementary Figure S2. (b) Scatterplot of the normalized western blotting intensity of MST1 in 20 CRC patients and 20 HCs. (c) Scatterplot of the MST1 ELISA concentrations in the HC samples and the CRC samples at different stages.
Figure 4ROC curve of MST1 and CEA. (a) ROC curve for serum MST1 in CRC and HC. (b) ROC curve for serum CEA in CRC and HC. (c) ROC curve for serum MST1 in early stage CRC (stage I and II) and HC. (d) ROC curve for serum CEA in early stage CRC (stage I and II) and HC. (e) ROC curve for MST1 Combined with CEA and FOBT. (f) Kaplan–Meier survival analysis for MST1.
Performance of MST1 and CEA in the diagnosis of CRC.
| AUC (95% CI) | Sensitivity (%) | Specificity (%) | |
|---|---|---|---|
| MST1 in CRC vs HC | 0.934 (0.871–0.997) | 82.4 | 93.8 |
| CEA in CRC vs HC | 0.773 (0.647–0.899) | 37.3 | 93.8 |
| MST1 in early stage CRC vs HC | 0.925 (0.842–1.000) | 80.0 | 93.8 |
| CEA in early stage CRC vs HC | 0.700 (0.534–0.866) | 32.0 | 93.8 |
CI, coefficient interval.
Serum samples information.
| Samples | MALDI-TOF-MS | Western blotting | ELISA |
|---|---|---|---|
|
| |||
| Total Number | 90 | 20 | 16 |
| Male/Female | 48/42 | 11/9 | 7/9 |
| Average age, y | 61.3 | 59.6 | 62.4 |
|
| |||
| Total Number | 127 | 20 | 51 |
| Male/Female | 70/57 | 10/10 | 28/23 |
| Average age, y | 60.5 | 62 | 61.7 |
| Stage (I/II/III/IV) | 25/36/48/18 | 3/7/8/2 | 10/16/15/10 |