| Literature DB >> 26053398 |
Wei Zhao1, Juan Li2, Junjie Zhang3, Pengfei Gao4, Hang Pei5, Lei Wang6, Fei Guo7, Jiekai Yu8, Shu Zheng9, Jiaxiang Wang10.
Abstract
The present study aimed to identify serum biomarkers for the detection of hepatoblastoma (HB). Serum samples were collected from 71 HB patients (stage I, n = 19; stage II, n = 19, stage III, n = 19; and stage IV, n = 14) and 23 age- and sex-matched healthy children. Differential expression of serum protein markers were screened using surface-enhanced laser desorption/ionization time-of-flight mass spectrometry (SELDI-TOF-MS), and the target proteins were isolated and purified using HPLC and identified using matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF-MS), SEQUEST, and bioinformatics analysis. Differential protein expression was confirmed by enzyme-linked immunosorbent analysis (ELISA). SELDI-TOF-MS screening identified a differentially expressed protein with an m/z of 9348 Da, which was subsequently identified as Apo A-I; its expression was significantly lower in the HB group as compared to the normal control group (1546.67 ± 757.81 vs. 3359.21 ± 999.36, respectively; p < 0.01). Although the expression level decreased with increasing disease stage, pair-wise comparison revealed significant differences in Apo A-I expression between the normal group and the HB subgroups (p < 0.01). ELISA verified the reduced expression of Apo A-I in the HB group. Taken together, these results suggest that Apo A-I may represent a serum protein biomarker of HB. Further studies will assess the value of using Apo A-I expression for HB diagnosis and staging.Entities:
Keywords: 2D-LC-LTQ-MS; MALDI-TOF-MS; SELDI-TOF-MS; apolipoprotein A–I; hepatoblastom; protein biomarker
Mesh:
Substances:
Year: 2015 PMID: 26053398 PMCID: PMC4490467 DOI: 10.3390/ijms160612669
Source DB: PubMed Journal: Int J Mol Sci ISSN: 1422-0067 Impact factor: 5.923
The ten differentially expressed proteins in hepatoblastoma vs. normal (mean ± SD).
| Hepatoblastoma | Normal | |
|---|---|---|
| 2032.3 | 889.41 ± 106.21 | 1058.41 ± 214.65 |
| 2486.6 | 621.45 ± 187.24 | 1306.64 ± 323.41 |
| 2963.5 | 2132.69 ± 524.12 | 2654.73 ± 408.64 |
| 3786.1 | 1135.30 ± 284.77 | 1462.58 ± 367.59 |
| 4571.3 | 1659.73 ± 325.38 | 974.57 ± 236.87 |
| 5269.0 | 1237.29 ± 363.74 | 1687.02 ± 397.54 |
| 5457.2 | 884.30 ± 204.23 | 656.31 ± 146.09 |
| 9348.0 * | 1546.67 ± 757.81 | 3359.21 ± 999.36 |
| 16,589.3 | 871.62 ± 659.37 | 452.14 ± 109.43 |
| 18,946.2 | 2068.85 ± 574.33 | 1564.89 ± 337.57 |
* The diagnostic model with the highest Youden index comprising m/z peak of 9348 Da.
Figure 1SELDI-TOF-MS analysis of proteins or peptide segments with an m/z of 9348 Da in the normal and HB groups.
SELDI-TOF-MS mass spectrometry analysis of proteins or peptide segments with an m/z of 9348 Da in the normal and HB groups.
| Group | Case | Intensity | ||||
|---|---|---|---|---|---|---|
| Normal | HB-I | HB-II | HB-III | |||
| Normal | 23 | 3359.21 ± 999.36 | – | – | – | – |
| HB | 71 | 1546.67 ± 757.81 | 0.000000 | – | – | – |
| HB-I | 19 | 2324.12 ± 679.42 | 0.000432 | – | – | – |
| HB-II | 19 | 1718.90 ± 418.62 | 0.000000 | 0.002153 | – | – |
| HB-III | 19 | 1268.10 ± 399.09 | 0.000000 | 0.000001 | 0.001674 | – |
| HB-IV | 14 | 635.91 ± 237.56 | 0.000000 | 0.000000 | 0.000000 | 0.000010 |
Figure 2Simulated electrophoretogram of proteins or peptide segments with an m/z of 9348 Da in the normal and HB groups.
Figure 3Isolation and purification of the proteins or peptide segments with an m/z of 9348 Da by HPLC. MALDI-TOF-MS confirmed that the sample eluted at minutes 36 and 37 contained the proteins with an m/z of 9348 Da.
Figure 4Isolation and purification of the proteins or peptide segments with an m/z of 9348 Da by HPLC. MALDI-TOF-MS confirmed that the sample eluted at minutes 36 and 37 contained the proteins with an m/z of 9348 Da.
Figure 52D-LC-LTQ-MS analysis of peptide segments obtained by enzymatic hydrolysis of the proteins or peptide segments with an m/z of 9348 Da.
Amino acid sequence of each peptide yielded by protein digestion as determined by 2D-LC-LTQ-MS.
| Protein | Peptides Identified | Sequence | |
|---|---|---|---|
| 9348 | Apolipoprotein A–I | K.WQEEMELYRQK.V | K |
| R.QKVEPLR.A | |||
| R.AELQEGARQK.L | |||
| K.LSPLGEEMR.D | |||
| R.AHVDALR.T | |||
| R.THLAPYSDELR.Q | |||
| R.LAARLEALK.E |
Peptides identified: The target protein was dissociated by enzymatic hydrolysis into little peptides, and these little peptides were identified by 2D-LC-LTQ-MS; The amino acid sequences of these little peptides were matched with the amino acid sequence of Apo C-I, and the equal parts were showed in boldface.
Amino acid sequence of the full-length protein obtained by matching and recombination of peptides.
| Protein | Confirmed Peptide | Coverage Rate | Score | |
|---|---|---|---|---|
| 9348 | Apolipoprotein A–I | WQEEMELYRQKVEPLRAELQEGARQKLHELQEKLSPLGEEMRDRARAHVDALRTHLAPYSDELRQRLAARLEALK | 45.0% | 88 |
Figure 6Serum Apo A–I protein levels in the normal healthy children and HB patients. Apo A–I levels were determined by ELISA. ** represents a significantly different change relative to the normal group, p < 0.01.
Sensitivity and specificity of various diagnosis methods between HB and healthy children.
| Diagnosis | Number of Cases | Sensitivity | Specificity | |
|---|---|---|---|---|
| HB Group | Healthy Group | |||
| Pathology | 32 | 29 | 100% (32/32) | 100% (29/29) |
| Apo C–I | 32 | 29 | 96.88% (31/32) | 95.55% (28/29) |
| AFP | 32 | 29 | 53.13% (17/32) | 86.21% (25/29) |
| CT | 32 | 29 | 68.75% (22/32) | 100% (29/29) |
Sensitivity and specificity of various diagnosis methods between HB and other pediatric abdominal solid tumors.
| Diagnosis | Number of Cases | Sensitivity | Specificity | |
|---|---|---|---|---|
| HB Group | Other Tumors | |||
| Pathology | 32 | 31 | 100% (32/32) | 100% (31/31) |
| Apo C–I | 32 | 31 | 96.88% (31/32) | 87.10% (27/31) |
| AFP | 32 | 31 | 53.13% (17/32) | 61.29% (19/31) |
| CT | 32 | 31 | 68.75% (22/32) | 100% (31/31) |
Amino acid sequence of the full-length protein obtained by matching and recombination of peptides.
| Patient ID | Age (Months) | Sex | Stage * | Tumor Size (cm) | Metastasis | Patient ID | Age (Months) | Sex | Stage | Tumor Size (cm) | Metastasis |
|---|---|---|---|---|---|---|---|---|---|---|---|
| P24 | 46 | F | I (R) | 4.5 | None | P60 | 41 | F | II (L) | 4.5 | None |
| P25 | 59 | F | I (R) | 4 | None | P61 | 48 | M | II (L) | 5 | None |
| P26 | 86 | F | I (R) | 3 | None | P62 | 72 | M | III (L) | 8.5 | None |
| P27 | 76 | M | I (R) | 5 | None | P63 | 36 | F | III (R) | 7 | None |
| P28 | 84 | F | I (R) | 4.5 | None | P64 | 54 | F | III (R) | 9 | None |
| P29 | 64 | M | I (R) | 3 | None | P65 | 93 | F | IIIa | 6 + 3.5 ** | Intraperitoneal |
| P30 | 95 | M | I (L) | 3 | None | P66 | 47 | M | IIId | 8 | None |
| P31 | 70 | M | I (R) | 3.5 | None | P67 | 62 | M | IIId | 6 | None |
| P32 | 37 | F | I (L) | 3 | None | P68 | 42 | F | III (R) | 7.5 | None |
| P33 | 16 | M | I (R) | 4 | None | P69 | 63 | M | III (R) | 8 | None |
| P34 | 82 | M | I (L) | 2.5 | None | P70 | 40 | F | IIId | 5.5 | None |
| P35 | 59 | M | I (L) | 3 | None | P71 | 39 | M | III (L) | 6 | None |
| P36 | 62 | M | I (L) | 2.5 | None | P72 | 74 | F | IIIa | 5 + 3 ** | None |
| P37 | 72 | F | I (R) | 4 | None | P73 | 53 | M | III (L) | 7 | None |
| P38 | 45 | F | I (L) | 3 | None | P74 | 66 | F | III (R) | 8.5 | Intraperitoneal |
| P39 | 62 | F | I(R) | 4 | None | P75 | 39 | F | III (R) | 6.5 | None |
| P40 | 36 | M | I (L) | 2 | None | P76 | 48 | M | IIId | 7.5 | Intraperitoneal |
| P41 | 52 | F | I (L) | 3 | None | P77 | 58 | M | IIId | 7 | None |
| P42 | 49 | F | I (L) | 3 | None | P78 | 46 | F | IIId | 7 | None |
| P43 | 85 | F | IIa | 3.5 + 2 ** | None | P79 | 68 | M | III (L) | 9 | None |
| P44 | 83 | M | II (L) | 6 | None | P80 | 60 | F | IIId | 8 | None |
| P45 | 74 | M | II (R) | 5.5 | None | P81 | 54 | M | IV | 9.5 | Extraperitoneal |
| P46 | 96 | F | II (R) | 7 | None | P82 | 76 | F | IV | 10.5 | None |
| P47 | 62 | M | II (L) | 5.5 | None | P83 | 63 | F | IV | 12 | Intraperitoneal |
| P48 | 37 | M | II (R) | 5 | None | P84 | 48 | F | IV (L + R) | 6.5 + 5 ** | Intraperitoneal |
| P49 | 66 | F | II (L) | 5 | None | P85 | 40 | F | IV | 10 | None |
| P50 | 44 | F | II (L) | 5.5 | None | P86 | 62 | F | IV | 11 | None |
| P51 | 78 | F | II (R) | 8 | None | P87 | 52 | M | IV | 11 | None |
| P52 | 55 | F | II (R) | 4.5 | None | P88 | 74 | M | IV | 14 | Extraperitoneal |
| P53 | 42 | M | II (L) | 6 | None | P89 | 60 | F | IV (L + R) | 8 + 7 ** | Extraperitoneal |
| P54 | 64 | M | II(R) | 5 | None | P90 | 45 | M | IV | 12 | None |
| P55 | 54 | F | II(L) | 6.5 | None | P91 | 50 | F | IV (L + R) | 6 + 7 ** | Intraperitoneal |
| P56 | 43 | F | II(R) | 5 | None | P92 | 84 | F | IV | 14 | Intraperitoneal |
| P57 | 69 | M | II(R) | 6 | None | P93 | 72 | M | IV | 14 | Intraperitoneal |
| P58 | 94 | F | II(L) | 6.5 | None | P94 | 37 | M | IV | 10 | None |
| P59 | 63 | M | II(L) | 5.5 | None |
* HB staging was carried out according to the International Society of Pediatric Oncology (SIOP) recommending PRE-Treatment EXTension (PRETEXT) system based on the imaging findings [3,31]; ** patient has two HB tumor lesions without any direct connection between them under gross or radiographic observation.