Literature DB >> 21228115

Identification of MST1/STK4 and SULF1 proteins as autoantibody targets for the diagnosis of colorectal cancer by using phage microarrays.

Ingrid Babel1, Rodrigo Barderas, Ramón Diaz-Uriarte, Víctor Moreno, Adolfo Suarez, María Jesús Fernandez-Aceñero, Ramón Salazar, Gabriel Capellá, J Ignacio Casal.   

Abstract

The characterization of the humoral response in cancer patients is becoming a practical alternative to improve early detection. We prepared phage microarrays containing colorectal cancer cDNA libraries to identify phage-expressed peptides recognized by tumor-specific autoantibodies from patient sera. From a total of 1536 printed phages, 128 gave statistically significant values to discriminate cancer patients from control samples. From this, 43 peptide sequences were unique following DNA sequencing. Six phages containing homologous sequences to STK4/MST1, SULF1, NHSL1, SREBF2, GRN, and GTF2I were selected to build up a predictor panel. A previous study with high-density protein microarrays had identified STK4/MST1 as a candidate biomarker. An independent collection of 153 serum samples (50 colorectal cancer sera and 103 reference samples, including healthy donors and sera from other related pathologies) was used as a validation set to study prediction capability. A combination of four phages and two recombinant proteins, corresponding to MST1 and SULF1, achieved an area under the curve of 0.86 to correctly discriminate cancer from healthy sera. Inclusion of sera from other different neoplasias did not change significantly this value. For early stages (A+B), the corrected area under the curve was 0.786. Moreover, we have demonstrated that MST1 and SULF1 proteins, homologous to phage-peptide sequences, can replace the original phages in the predictor panel, improving their diagnostic accuracy.

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Year:  2011        PMID: 21228115      PMCID: PMC3047148          DOI: 10.1074/mcp.M110.001784

Source DB:  PubMed          Journal:  Mol Cell Proteomics        ISSN: 1535-9476            Impact factor:   5.911


  28 in total

1.  A conserved MST-FOXO signaling pathway mediates oxidative-stress responses and extends life span.

Authors:  Maria K Lehtinen; Zengqiang Yuan; Peter R Boag; Yue Yang; Judit Villén; Esther B E Becker; Sara DiBacco; Núria de la Iglesia; Steven Gygi; T Keith Blackwell; Azad Bonni
Journal:  Cell       Date:  2006-06-02       Impact factor: 41.582

Review 2.  Protein microarrays as tools for functional proteomics.

Authors:  Joshua LaBaer; Niroshan Ramachandran
Journal:  Curr Opin Chem Biol       Date:  2005-02       Impact factor: 8.822

3.  Evaluation of T7 and lambda phage display systems for survey of autoantibody profiles in cancer patients.

Authors:  Zane Kalniņa; Karīna Siliņa; Irēna Meistere; Pawel Zayakin; Alexander Rivosh; Artūrs Abols; Mārcis Leja; Olga Minenkova; Dirk Schadendorf; Aija Linē
Journal:  J Immunol Methods       Date:  2008-02-21       Impact factor: 2.303

4.  Proteomics-based validation of genomic data: applications in colorectal cancer diagnosis.

Authors:  Juan Madoz-Gúrpide; Paula López-Serra; Jorge Luis Martínez-Torrecuadrada; Lydia Sánchez; Luis Lombardía; J Ignacio Casal
Journal:  Mol Cell Proteomics       Date:  2006-05-29       Impact factor: 5.911

5.  Autoantibody signatures in prostate cancer.

Authors:  Xiaoju Wang; Jianjun Yu; Arun Sreekumar; Sooryanarayana Varambally; Ronglai Shen; Donald Giacherio; Rohit Mehra; James E Montie; Kenneth J Pienta; Martin G Sanda; Philip W Kantoff; Mark A Rubin; John T Wei; Debashis Ghosh; Arul M Chinnaiyan
Journal:  N Engl J Med       Date:  2005-09-22       Impact factor: 91.245

6.  Diagnostic markers of ovarian cancer by high-throughput antigen cloning and detection on arrays.

Authors:  Madhumita Chatterjee; Saroj Mohapatra; Alexei Ionan; Gagandeep Bawa; Rouba Ali-Fehmi; Xiaoju Wang; James Nowak; Bin Ye; Fatimah A Nahhas; Karen Lu; Steven S Witkin; David Fishman; Adnan Munkarah; Robert Morris; Nancy K Levin; Natalie N Shirley; Gerard Tromp; Judith Abrams; Sorin Draghici; Michael A Tainsky
Journal:  Cancer Res       Date:  2006-01-15       Impact factor: 12.701

Review 7.  Epitomics: global profiling of immune response to disease using protein microarrays.

Authors:  Madhumita Chatterjee; Alexei Ionan; Sorin Draghici; Michael A Tainsky
Journal:  OMICS       Date:  2006

Review 8.  The multidisciplinary management of gastrointestinal cancer. Colorectal cancer screening.

Authors:  Sidney J Winawer
Journal:  Best Pract Res Clin Gastroenterol       Date:  2007       Impact factor: 3.043

Review 9.  Tumour markers in colorectal cancer: European Group on Tumour Markers (EGTM) guidelines for clinical use.

Authors:  M J Duffy; A van Dalen; C Haglund; L Hansson; E Holinski-Feder; R Klapdor; R Lamerz; P Peltomaki; C Sturgeon; O Topolcan
Journal:  Eur J Cancer       Date:  2007-05-18       Impact factor: 9.162

10.  Transcriptional recapitulation and subversion of embryonic colon development by mouse colon tumor models and human colon cancer.

Authors:  Sergio Kaiser; Young-Kyu Park; Jeffrey L Franklin; Richard B Halberg; Ming Yu; Walter J Jessen; Johannes Freudenberg; Xiaodi Chen; Kevin Haigis; Anil G Jegga; Sue Kong; Bhuvaneswari Sakthivel; Huan Xu; Timothy Reichling; Mohammad Azhar; Gregory P Boivin; Reade B Roberts; Anika C Bissahoyo; Fausto Gonzales; Greg C Bloom; Steven Eschrich; Scott L Carter; Jeremy E Aronow; John Kleimeyer; Michael Kleimeyer; Vivek Ramaswamy; Stephen H Settle; Braden Boone; Shawn Levy; Jonathan M Graff; Thomas Doetschman; Joanna Groden; William F Dove; David W Threadgill; Timothy J Yeatman; Robert J Coffey; Bruce J Aronow
Journal:  Genome Biol       Date:  2007       Impact factor: 13.583

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  25 in total

Review 1.  Screening for colorectal cancer: established and emerging modalities.

Authors:  Nikhil Pawa; Tan Arulampalam; John D Norton
Journal:  Nat Rev Gastroenterol Hepatol       Date:  2011-11-01       Impact factor: 46.802

2.  Exploration of MST1-Mediated Secondary Brain Injury Induced by Intracerebral Hemorrhage in Rats via Hippo Signaling Pathway.

Authors:  Peng Zhang; Tianyi Wang; Dongping Zhang; Zhuwei Zhang; Shuai Yuan; Juyi Zhang; Jie Cao; Haiying Li; Xiang Li; Haitao Shen; Gang Chen
Journal:  Transl Stroke Res       Date:  2019-04-02       Impact factor: 6.829

3.  Analysis of Protein-Protein Interactions by Protein Microarrays.

Authors:  Ana Montero-Calle; Rodrigo Barderas
Journal:  Methods Mol Biol       Date:  2021

4.  Phage Microarrays for Screening of Humoral Immune Responses.

Authors:  Ana Montero-Calle; Pablo San Segundo-Acosta; María Garranzo-Asensio; Guillermo Solís-Fernández; Maricruz Sanchez-Martinez; Rodrigo Barderas
Journal:  Methods Mol Biol       Date:  2021

5.  Whole Genome-Derived Tiled Peptide Arrays Detect Prediagnostic Autoantibody Signatures in Non-Small-Cell Lung Cancer.

Authors:  Yuanqing Yan; Nan Sun; Hong Wang; Makoto Kobayashi; Jon J Ladd; James P Long; Ken C Lo; Jigar Patel; Eric Sullivan; Thomas Albert; Gary E Goodman; Kim-Anh Do; Samir M Hanash
Journal:  Cancer Res       Date:  2019-02-05       Impact factor: 12.701

6.  In-depth characterization of the secretome of colorectal cancer metastatic cells identifies key proteins in cell adhesion, migration, and invasion.

Authors:  Rodrigo Barderas; Marta Mendes; Sofia Torres; Rubén A Bartolomé; María López-Lucendo; Roi Villar-Vázquez; Alberto Peláez-García; Eduardo Fuente; Félix Bonilla; J Ignacio Casal
Journal:  Mol Cell Proteomics       Date:  2013-02-26       Impact factor: 5.911

7.  ORF phage display to identify cellular proteins with different functions.

Authors:  Wei Li
Journal:  Methods       Date:  2012-07-23       Impact factor: 3.608

8.  Protein Microarrays for Ocular Diseases.

Authors:  Guillermo Solís-Fernández; Ana Montero-Calle; Miren Alonso-Navarro; Miguel Ángel Fernandez-Torres; Victoria Eugenia Lledó; María Garranzo-Asensio; Rodrigo Barderas; Ana Guzman-Aranguez
Journal:  Methods Mol Biol       Date:  2021

9.  Autoantibody signatures involving glycolysis and splicesome proteins precede a diagnosis of breast cancer among postmenopausal women.

Authors:  Jon J Ladd; Timothy Chao; Melissa M Johnson; Ji Qiu; Alice Chin; Rebecca Israel; Sharon J Pitteri; Jianning Mao; Mei Wu; Lynn M Amon; Martin McIntosh; Christopher Li; Ross Prentice; Nora Disis; Samir Hanash
Journal:  Cancer Res       Date:  2012-12-26       Impact factor: 12.701

Review 10.  Colorectal cancer: from prevention to personalized medicine.

Authors:  Gemma Binefa; Francisco Rodríguez-Moranta; Alex Teule; Manuel Medina-Hayas
Journal:  World J Gastroenterol       Date:  2014-06-14       Impact factor: 5.742

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