Literature DB >> 29078307

Efficient synthesis of phycocyanobilin in mammalian cells for optogenetic control of cell signaling.

Youichi Uda1,2,3, Yuhei Goto2,3, Shigekazu Oda2,3, Takayuki Kohchi4, Michiyuki Matsuda1,5, Kazuhiro Aoki6,3,7,8.   

Abstract

Optogenetics is a powerful tool to precisely manipulate cell signaling in space and time. For example, protein activity can be regulated by several light-induced dimerization (LID) systems. Among them, the phytochrome B (PhyB)-phytochrome-interacting factor (PIF) system is the only available LID system controlled by red and far-red lights. However, the PhyB-PIF system requires phycocyanobilin (PCB) or phytochromobilin as a chromophore, which must be artificially added to mammalian cells. Here, we report an expression vector that coexpresses HO1 and PcyA with Ferredoxin and Ferredoxin-NADP+ reductase for the efficient synthesis of PCB in the mitochondria of mammalian cells. An even higher intracellular PCB concentration was achieved by the depletion of biliverdin reductase A, which degrades PCB. The PCB synthesis and PhyB-PIF systems allowed us to optogenetically regulate intracellular signaling without any external supply of chromophores. Thus, we have provided a practical method for developing a fully genetically encoded PhyB-PIF system, which paves the way for its application to a living animal. Published under the PNAS license.

Entities:  

Keywords:  ERK; FRET; cell signaling; optogenetics; phytochrome

Mesh:

Substances:

Year:  2017        PMID: 29078307      PMCID: PMC5692546          DOI: 10.1073/pnas.1707190114

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  51 in total

1.  Synthesis of phycocyanobilin in mammalian cells.

Authors:  Konrad Müller; Raphael Engesser; Jens Timmer; Ferenc Nagy; Matias D Zurbriggen; Wilfried Weber
Journal:  Chem Commun (Camb)       Date:  2013-10-11       Impact factor: 6.222

2.  Human biliverdin reductase is an ERK activator; hBVR is an ERK nuclear transporter and is required for MAPK signaling.

Authors:  Nicole Lerner-Marmarosh; Tihomir Miralem; Peter E M Gibbs; Mahin D Maines
Journal:  Proc Natl Acad Sci U S A       Date:  2008-05-07       Impact factor: 11.205

3.  Efficient selection for high-expression transfectants with a novel eukaryotic vector.

Authors:  H Niwa; K Yamamura; J Miyazaki
Journal:  Gene       Date:  1991-12-15       Impact factor: 3.688

Review 4.  Manipulating signaling at will: chemically-inducible dimerization (CID) techniques resolve problems in cell biology.

Authors:  Robert DeRose; Takafumi Miyamoto; Takanari Inoue
Journal:  Pflugers Arch       Date:  2013-01-09       Impact factor: 3.657

Review 5.  Optogenetic control of intracellular signaling pathways.

Authors:  Kai Zhang; Bianxiao Cui
Journal:  Trends Biotechnol       Date:  2014-12-17       Impact factor: 19.536

6.  Biliverdin reductase: a major physiologic cytoprotectant.

Authors:  David E Baranano; Mahil Rao; Christopher D Ferris; Solomon H Snyder
Journal:  Proc Natl Acad Sci U S A       Date:  2002-11-27       Impact factor: 11.205

Review 7.  Cell signaling by receptor tyrosine kinases.

Authors:  Mark A Lemmon; Joseph Schlessinger
Journal:  Cell       Date:  2010-06-25       Impact factor: 41.582

8.  Inactivation of phytochrome- and phycobiliprotein-chromophore precursors by rat liver biliverdin reductase.

Authors:  M J Terry; M D Maines; J C Lagarias
Journal:  J Biol Chem       Date:  1993-12-15       Impact factor: 5.157

9.  Rapid blue-light-mediated induction of protein interactions in living cells.

Authors:  Matthew J Kennedy; Robert M Hughes; Leslie A Peteya; Joel W Schwartz; Michael D Ehlers; Chandra L Tucker
Journal:  Nat Methods       Date:  2010-10-31       Impact factor: 28.547

10.  Regulated membrane localization of Tiam1, mediated by the NH2-terminal pleckstrin homology domain, is required for Rac-dependent membrane ruffling and C-Jun NH2-terminal kinase activation.

Authors:  F Michiels; J C Stam; P L Hordijk; R A van der Kammen; L Ruuls-Van Stalle; C A Feltkamp; J G Collard
Journal:  J Cell Biol       Date:  1997-04-21       Impact factor: 10.539

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  29 in total

1.  Functional Modulation of Receptor Proteins on Cellular Interface with Optogenetic System.

Authors:  Mizuki Endo; Takeaki Ozawa
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

2.  Visualization and Manipulation of Intracellular Signaling.

Authors:  Yuhei Goto; Yohei Kondo; Kazuhiro Aoki
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

3.  Reverse and Forward Engineering Multicellular Structures with Optogenetics.

Authors:  Thomas R Mumford; Lee Roth; Lukasz J Bugaj
Journal:  Curr Opin Biomed Eng       Date:  2020-10-14

4.  CreLite: An optogenetically controlled Cre/loxP system using red light.

Authors:  Shuo-Ting Yen; Kenneth A Trimmer; Nader Aboul-Fettouh; Rachel D Mullen; James C Culver; Mary E Dickinson; Richard R Behringer; George T Eisenhoffer
Journal:  Dev Dyn       Date:  2020-08-31       Impact factor: 3.780

Review 5.  Illuminating developmental biology with cellular optogenetics.

Authors:  Heath E Johnson; Jared E Toettcher
Journal:  Curr Opin Biotechnol       Date:  2018-03-02       Impact factor: 9.740

Review 6.  Biophysical research in Okazaki, Japan.

Authors:  Shuji Akiyama; Kazuhiro Aoki; Yoshihiro Kubo
Journal:  Biophys Rev       Date:  2020-02-15

Review 7.  A bright future: optogenetics to dissect the spatiotemporal control of cell behavior.

Authors:  Alexander G Goglia; Jared E Toettcher
Journal:  Curr Opin Chem Biol       Date:  2018-12-05       Impact factor: 8.822

8.  Phytochromes and Cyanobacteriochromes: Photoreceptor Molecules Incorporating a Linear Tetrapyrrole Chromophore.

Authors:  Keiji Fushimi; Rei Narikawa
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

9.  Cyanobacteriochrome-based photoswitchable adenylyl cyclases (cPACs) for broad spectrum light regulation of cAMP levels in cells.

Authors:  Matthew Blain-Hartung; Nathan C Rockwell; Marcus V Moreno; Shelley S Martin; Fei Gan; Donald A Bryant; J Clark Lagarias
Journal:  J Biol Chem       Date:  2018-04-09       Impact factor: 5.157

Review 10.  Lights, cytoskeleton, action: Optogenetic control of cell dynamics.

Authors:  Torsten Wittmann; Alessandro Dema; Jeffrey van Haren
Journal:  Curr Opin Cell Biol       Date:  2020-05-01       Impact factor: 8.382

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