| Literature DB >> 29075009 |
Ryan Pathak1, Hossein Ragheb2, Neil A Thacker2, David M Morris2, Houshang Amiri3,4, Joost Kuijer5, Nandita M deSouza6, Arend Heerschap3, Alan Jackson2.
Abstract
Apparent Diffusion Coefficient (ADC) is a potential quantitative imaging biomarker for tumour cell density and is widely used to detect early treatment changes in cancer therapy. We propose a strategy to improve confidence in the interpretation of measured changes in ADC using a data-driven model that describes sources of measurement error. Observed ADC is then standardised against this estimation of uncertainty for any given measurement. 20 patients were recruited prospectively and equitably across 4 sites, and scanned twice (test-retest) within 7 days. Repeatability measurements of defined regions (ROIs) of tumour and normal tissue were quantified as percentage change in mean ADC (test vs. re-test) and then standardised against an estimation of uncertainty. Multi-site reproducibility, (quantified as width of the 95% confidence bound between the lower confidence interval and higher confidence interval for all repeatability measurements), was compared before and after standardisation to the model. The 95% confidence interval width used to determine a statistically significant change reduced from 21.1 to 2.7% after standardisation. Small tumour volumes and respiratory motion were found to be important contributors to poor reproducibility. A look up chart has been provided for investigators who would like to estimate uncertainty from statistical error on individual ADC measurements.Entities:
Mesh:
Year: 2017 PMID: 29075009 PMCID: PMC5658431 DOI: 10.1038/s41598-017-14625-0
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
List of MR systems and receiver coils used, with variable DWI acquisition parameters.
| MRI (1.5 T) | Body coil | Parallel imaging | B-values (s/mm2) | TR/TE (ms) |
|---|---|---|---|---|
| Siemens Magnetom Avanto | 6 channel | GRAPPA 2 | 100, 500, 900 | 8000/76 |
| General Electric (GE) Signa HDxt | 8 channel | ASSET | 100, 500, 900 | 8500/74 |
| Philips Achieva | 8 channel | SENSE | 0, 100, 500, 900 | 8000/88 |
Figure 1Tumour selection and image analysis. A single lesion is chosen based on size and location from b-100 DWI images (right image) and a ROI is manually defined for each test-retest data set (middle image). A parametric map of ADC values is calculated for each pixel within the ROI (left image). For 3D volumes, the voxel ADC values within each slice ROI is combined and represented as a histogram (far left).
The ADC values, lesion size and image characteristics for each patient. For 3D whole tumour volumes, the average (*) of two baselines is displayed for; number of voxels (where each voxel is 11.25 mm3), mean ADC values (×10−5 mm2/s). The percentage change in tumour volume and mean ADC between test-retest is given (ΔVOL%, ΔADC%). The data sets visually affected by “Motion” artefact are indicated in the Image column.
| Patient | Voxels* | ΔVOL% | ADC* | ΔADC% | Lesion | Image |
|---|---|---|---|---|---|---|
| 1 | 1141 | 0.44 | 76 | 18.56 | Motion | |
| 2 | 3214 | 8.47 | 102 | −22.37 | Sub-phrenic | Motion |
| 3 | 2845 | 0.21 | 97 | 1.17 | 5% cystic | |
| 4 | 1297 | 0.15 | 77 | 14.69 | ||
| 5 | 603 | 4.81 | 98 | −3.39 | Sub-phrenic | Motion |
| 6 | 573 | 2.44 | 87 | −2.52 | ||
| 7 | 148 | −14.63 | 123 | 2.25 | ||
| 8 | 3178 | −1.48 | 102 | 7.60 | Sub-phrenic | Motion |
| 9 | 4589 | 1.44 | 95 | −4.35 | ||
| 10 | 3731 | 28.19 | 103 | 1.69 | ||
| 11 | 5957 | 0.32 | 140 | 6.48 | ||
| 12 | 74572 | −6.04 | 102 | −12.13 | Motion | |
| 13 | 6780 | −4.09 | 93 | 1.22 | ||
| 14 | 270 | −5.57 | 93 | −7.36 | ||
| 15 | 61130 | −5.01 | 118 | −1.11 | ||
| 16 | 8788 | 4.79 | 127 | −5.30 | 10% cystic | |
| 17 | 4315 | −4.82 | 98 | 1.06 | ||
| 18 | 2140 | −2.38 | 129 | 1.04 | ||
| 19 | 7914 | 8.38 | 198 | 2.84 | 95% cystic | |
| 20 | 4304 | −3.53 | 110 | −0.31 |
Figure 2Tumour reproducibility of ΔADC% as measured by the 95% confidence interval width for all multisite data. ∆ADC% is plotted against ROI size (log number of voxels) for 3D and 2D tumour regions (3D circles, 2D triangles). Data affected by motion is highlighted (solid black). The fixed-sized normal parenchyma ROIs are included in the calculation of the 95% CI width of 21.1%.
Figure 3The relationship between statistical measurement error and tumour ROI size. Measurement error improves with increasing ROI size, up to a threshold of around 2000 voxels equivalent to 22.5 cm3.
Figure 4The improvement in estimating repeatability measurements after accounting for the contribution of statistical measurement error. ∆ADC% is plotted against ROI size (log scale of number of voxels) for 3D and 2D tumour regions (3D circles, 2D triangles). Data affected by motion is highlighted (solid black). When the contribution of statistical measurement error is factored out (compared to Fig. 2), the 95% confidence interval width improves from 21.1% to 2.7%. The majority of data affected by motion become outliers, regardless of their size.
Figure 5Look up chart for estimating statistical error. Using the parameters that produced the best fit of data, a look-up chart has been created, that can be utilised to estimate statistical measurement error for any ROI with a known ADC histogram width (SD) and size (voxels).