Literature DB >> 29064502

Phase behaviour of disordered proteins underlying low density and high permeability of liquid organelles.

Ming-Tzo Wei1, Shana Elbaum-Garfinkle1, Alex S Holehouse2, Carlos Chih-Hsiung Chen1, Marina Feric1, Craig B Arnold3, Rodney D Priestley1, Rohit V Pappu2, Clifford P Brangwynne1.   

Abstract

Many intracellular membraneless organelles form via phase separation of intrinsically disordered proteins (IDPs) or regions (IDRs). These include the Caenorhabditis elegans protein LAF-1, which forms P granule-like droplets in vitro. However, the role of protein disorder in phase separation and the macromolecular organization within droplets remain elusive. Here, we utilize a novel technique, ultrafast-scanning fluorescence correlation spectroscopy, to measure the molecular interactions and full coexistence curves (binodals), which quantify the protein concentration within LAF-1 droplets. The binodals of LAF-1 and its IDR display a number of unusual features, including 'high concentration' binodal arms that correspond to remarkably dilute droplets. We find that LAF-1 and other in vitro and intracellular droplets are characterized by an effective mesh size of ∼3-8 nm, which determines the size scale at which droplet properties impact molecular diffusion and permeability. These findings reveal how specific IDPs can phase separate to form permeable, low-density (semi-dilute) liquids, whose structural features are likely to strongly impact biological function.

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Year:  2017        PMID: 29064502     DOI: 10.1038/nchem.2803

Source DB:  PubMed          Journal:  Nat Chem        ISSN: 1755-4330            Impact factor:   24.427


  132 in total

1.  Liquid Nuclear Condensates Mechanically Sense and Restructure the Genome.

Authors:  Yongdae Shin; Yi-Che Chang; Daniel S W Lee; Joel Berry; David W Sanders; Pierre Ronceray; Ned S Wingreen; Mikko Haataja; Clifford P Brangwynne
Journal:  Cell       Date:  2018-11-29       Impact factor: 41.582

2.  Mapping Local and Global Liquid Phase Behavior in Living Cells Using Photo-Oligomerizable Seeds.

Authors:  Dan Bracha; Mackenzie T Walls; Ming-Tzo Wei; Lian Zhu; Martin Kurian; José L Avalos; Jared E Toettcher; Clifford P Brangwynne
Journal:  Cell       Date:  2018-11-29       Impact factor: 41.582

3.  Engineered Ribonucleoprotein Granules Inhibit Translation in Protocells.

Authors:  Joseph R Simon; Seyed Ali Eghtesadi; Michael Dzuricky; Lingchong You; Ashutosh Chilkoti
Journal:  Mol Cell       Date:  2019-06-04       Impact factor: 17.970

4.  Controlling the material properties and rRNA processing function of the nucleolus using light.

Authors:  Lian Zhu; Tiffany M Richardson; Ludivine Wacheul; Ming-Tzo Wei; Marina Feric; Gena Whitney; Denis L J Lafontaine; Clifford P Brangwynne
Journal:  Proc Natl Acad Sci U S A       Date:  2019-08-09       Impact factor: 11.205

5.  The Role of Cohesiveness in the Permeability of the Spatial Assemblies of FG Nucleoporins.

Authors:  Chad Gu; Andrei Vovk; Tiantian Zheng; Rob D Coalson; Anton Zilman
Journal:  Biophys J       Date:  2019-03-07       Impact factor: 4.033

6.  Relation between single-molecule properties and phase behavior of intrinsically disordered proteins.

Authors:  Gregory L Dignon; Wenwei Zheng; Robert B Best; Young C Kim; Jeetain Mittal
Journal:  Proc Natl Acad Sci U S A       Date:  2018-09-14       Impact factor: 11.205

Review 7.  The molecular language of membraneless organelles.

Authors:  Edward Gomes; James Shorter
Journal:  J Biol Chem       Date:  2018-07-25       Impact factor: 5.157

Review 8.  Do Cellular Condensates Accelerate Biochemical Reactions? Lessons from Microdroplet Chemistry.

Authors:  Wylie Stroberg; Santiago Schnell
Journal:  Biophys J       Date:  2018-07-03       Impact factor: 4.033

9.  Targeting of NF-κB to Dendritic Spines Is Required for Synaptic Signaling and Spine Development.

Authors:  Erica C Dresselhaus; Matthew C H Boersma; Mollie K Meffert
Journal:  J Neurosci       Date:  2018-03-19       Impact factor: 6.167

Review 10.  The Pathophysiology of Tau and Stress Granules in Disease.

Authors:  Anna Cruz; Mamta Verma; Benjamin Wolozin
Journal:  Adv Exp Med Biol       Date:  2019       Impact factor: 2.622

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