| Literature DB >> 29043558 |
Laura Hui-Ru Tan1, Angela Jin-Rong Tan1, Yu-Ying Ng1, John Jia-En Chua2,3,4, Wee-Siong Chew5, Sneha Muralidharan6, Federico Torta7, Bamaprasad Dutta8, Siu Kwan Sze8, Deron R Herr9, Wei-Yi Ong10,11.
Abstract
Sphingomyelinases are a family of enzymes that hydrolyze sphingomyelin to generate phosphocholine and ceramide. The brain distribution and function of neutral sphingomyelinase 2 (nSMase2) were elucidated in this study. nSMase2 mRNA expression was greatest in the striatum, followed by the prefrontal cortex, hippocampus, cerebellum, thalamus, brainstem, and olfactory bulb. The striatum had the highest level of nSMase2 protein expression, followed by the prefrontal cortex, thalamus, hippocampus, brainstem, and cerebellum. Dense immunolabeling was observed in the striatum, including the caudate-putamen, while moderately dense staining was found in the olfactory bulb and cerebral neocortex. Electron microscopy of the caudate-putamen showed nSMase2 immunoreaction product was present in small diameter dendrites or dendritic spines, that formed asymmetrical synapses with unlabeled axon terminals containing small round vesicles; and characteristics of glutamatergic axons. Lipidomic analysis of the striatum showed increase in long chain sphingomyelins, SM36:1 and SM38:1 after inhibition of nSMase activity. Quantitative proteomic analysis of striatal lipid raft fraction showed many proteins were downregulated by more than 2-fold after inhibition or antisense knockdown of nSMase; consistent with the notion that nSMase2 activity is important for aggregation or clustering of proteins in lipid rafts. Inhibition or antisense knockdown of nSMase2 in the caudate-putamen resulted in motor deficits in the rotarod and narrow beam tests; as well as decreased acoustic startle and improved prepulse inhibition of the startle reflex. Together, results indicate an important function of nSMase2 in the striatum.Entities:
Keywords: Antisense knockdown; GW4869; Lipid rafts; Lipidomics; Membrane lipids; Microdomains; Motor function; Proteomics; Sphingolipids; Startle reflex; nSMase2
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Year: 2017 PMID: 29043558 PMCID: PMC5994222 DOI: 10.1007/s12035-017-0784-z
Source DB: PubMed Journal: Mol Neurobiol ISSN: 0893-7648 Impact factor: 5.590
Comparison between the three nSMase isoforms. Based on data from references [8–16]
| nSMase1 | nSMase2 | nSMase3 | |
|---|---|---|---|
| Optimal pH | 7.4 | ||
| Molecular weight (kDa) | 47.5 | 71 | 97.8 |
| Substrate specificity | Lyso-platelet activating factor | Sphingomyelin | |
| Inhibitors | 3- | ||
| No NSM1-specific inhibitor | GW4869, cambinol | Scyphostatin | |
| Cellular localization | Endoplasmic reticulum, Golgi apparatus, and/or nuclear matrix | Golgi apparatus and plasma membrane | Endoplasmic reticulum and Golgi apparatus |
| Expression | Multiple tissues | Highest expression in the brain | Highest expression in striated muscle and heart muscle |
Acoustic startle reflex. Summary of different trials. The session consisted of 32 discrete trials, which were conducted in pseudorandom order. The prepulse-to-pulse interval was set at 100 ms.
| Trial | Number of trials | Intensities (dB) | Duration |
|---|---|---|---|
| Acclimation/no stimulus | – | 65 | 5 min |
| Pulse | 17 | 120 | 40 ms |
| Prepulse + pulse | 5 | 69 + 120 | 20 ms + 40 ms |
| 5 | 73 + 120 | ||
| 5 | 77 + 120 |
Fig. 1Real-time RT-PCR analyses of A-SMase (ASM), nSMase 1 (NSM1), nSMase 2 (NSM2), nSMase 3 (NSM3) mRNA distribution in various parts of the rat brain including olfactory bulb (OB), prefrontal cortex (PFC), striatum (STR), thalamus/hypothalamus (THA), hippocampus (HPC), cortex 1 (CTX1), cortex 2 (CTX2), cerebellum (CB), and brainstem (BS). Values were normalized to the lowest expressing nSMase2 in the olfactory bulb. Data represents the mean and standard error from n = 6 Wistar rats
Fig. 2a Immunoblot of the striatum of adult rats injected with scrambled sense nSMase2 (SS) and antisense nSMase2 (AS). Antisense knockdown of nSMase2 resulted in reduced density of the 71-kDa band, indicating effectiveness of the knockdown, as well as specificity of the antibody. b Densitometric analysis of nSMase2 band intensities of SS- and AS-injected rats, normalized to β-actin. Data represents the mean and standard error from n = 6 Wistar rats in each group. Each bar in the diagram indicates mean + SEM
Fig. 3a Immunoblot of adult rats in selected parts of the rat brain including the prefrontal cortex (PFC), striatum (STR), thalamus (THA), hippocampus (HPC), cerebellum (CB), and brainstem (BS). The striatum was found to have the highest nSMase2 protein expression, followed by the prefrontal cortex, thalamus, hippocampus, brainstem, and cerebellum. b Densitometric analysis of nSMase2 band intensities, normalized to β-actin. Data represents the mean and standard error from n = 4 Wistar rats. Each bar in the diagram indicates mean + SEM
Fig. 4Light micrographs of control and nSMase2-immunolabeled sections of the rat CNS. a Control section from the striatum which had been incubated with PBS instead of primary antibody, showing absence of staining. b Low magnification showing the dorsal striatum (caudate-putamen, CPU) and globus pallidus (GP). White matter tracts such as the corpus callosum (CC) are unlabeled. c Moderately dense staining is found in the olfactory bulb (OB). d Moderately dense staining is found in the prefrontal cortex (PFC). III indicates layer III. e Dense staining is found in the form of puncta in the neuropil, in the caudate-putamen (CPU). f Light labeling is observe in the hippocampus. CA1, field CA1; SP, stratum pyramidale (SP). g Light labeling is found in the thalamus (TH). h Dense labeling is found in the dorsal horn (DH) of the spinal cord. Scale: a, c–h = 200 μm. b = 2 mm
Fig. 5a, b Electron micrographs of nSMase2-immunolabeled sections of the striatum. Immunoreaction product is present in small diameter dendrites or dendritic spines (D) which forms asymmetrical synapses (arrows) with unlabeled axon terminals (AT). The dendrites are putatively identified as those of medium spiny neurons in the striatum, and axon terminals, as glutamatergic axons that project from the motor cortex. Scale = 100 nm
Fig. 6Lipidomic analysis of lipid raft fractions. a, b Quantitation of 34:1 sphingomyelin and its corresponding ceramide species. There is no significant difference between vehicle- and GW4869 nSMase inhibitor-treated groups. c–f Quantitation of longer chain 36:1 and 38:1 sphingomyelins and their corresponding ceramides. Sphingomyelins, but not ceramides, were significantly reduced by inhibitor treatment. Asterisks indicate significant differences compared to controls *p < 0.05
Proteins decreased in lipid raft fractions of rats injected with GW4869 nSMase inhibitor (Inb) or saline (Sal); or antisense (AS) vs. scrambled sense (SS)
| Gene symbol | Name | Pro_Mass | AS/SS | Inb/Sal |
|---|---|---|---|---|
| Eef2 | Elongation factor 2 | 96192 | 0.082391 | 0.356 |
| Anxa6 | Annexin | 76108 | 0.105078 | 0.061913 |
| Prdx5 | Isoform cytoplasmic + peroxisomal of peroxiredoxin-5, mitochondrial | 17195 | 0.115124 | 0.253253 |
| Lonp1 | Lon protease homolog, mitochondrial | 106296 | 0.139431 | 0.267 |
| Aars | Alanine-tRNA ligase, cytoplasmic | 107522 | 0.139431 | 0.4005 |
| Hpca | Neuron-specific calcium-binding protein hippocalcin | 22527 | 0.174288 | 0.205385 |
| LOC100361259 | 60S ribosomal protein L13 | 24168 | 0.179974 | 0.492118 |
| Ctnna1 | Catenin (cadherin-associated protein), alpha 1 | 100858 | 0.18126 | 0.4984 |
| Spr | RCG56371 | 28510 | 0.185908 | 0.34176 |
| Ssrp1 | FACT complex subunit SSRP1 | 81206 | 0.185908 | 0.438154 |
| Ndrg1 | Protein NDRG | 43383 | 0.193344 | 0.167529 |
| Anxa7 | Annexin | 50272 | 0.2014 | 0.237333 |
| Cbr1 | Carbonyl reductase [NADPH] 1 | 30920 | 0.210555 | 0.248121 |
| Coro1c | Coronin | 53828 | 0.220765 | 0.328615 |
| Dpp6 | Dipeptidyl aminopeptidase-like protein 6 | 91842 | 0.2226 | 0.412211 |
| Celf2 | CUGBP Elav-like family member 2 | 54291 | 0.231018 | 0.397882 |
| Oxr1 | Oxidation resistance protein 1 | 97418 | 0.232385 | 0.323636 |
| Gng3 | Guanine nucleotide-binding protein subunit gamma | 8527 | 0.250224 | 0.294869 |
| H3f3b | Histone H3 | 15376 | 0.255078 | 0.441192 |
| A0A0G2JTG1 | Uncharacterized protein | 9382 | 0.256959 | 0.286437 |
| Park7 | Park7 protein | 23002 | 0.260142 | 0.44144 |
| Tsg101 | Tumor susceptibility gene 101 | 44221 | 0.264338 | 0.3115 |
| Fkbp1a | Peptidyl-prolyl cis-trans isomerase FKBP1A | 11972 | 0.270931 | 0.462391 |
| Frrs1l | DOMON domain-containing protein FRRS1L | 32892 | 0.271452 | 0.314986 |
| Hist1h4b | Histone H4 | 11360 | 0.27173 | 0.416595 |
| Pabpc1 | Polyadenylate-binding protein 1 | 60149 | 0.27189 | 0.408525 |
| Rpl24 | 60S ribosomal protein L24 | 17779 | 0.273329 | 0.196058 |
| Chchd6 | MICOS complex subunit Mic25 | 29592 | 0.2736 | 0.449684 |
| A0A0G2KBA1 | Uncharacterized protein | 31964 | 0.274636 | 0.319673 |
| Erp29 | Endoplasmic reticulum resident protein 29 | 28614 | 0.274636 | 0.323636 |
| Pitpna | Phosphatidylinositol transfer protein alpha isoform | 32059 | 0.276925 | 0.209412 |
| Actn3 | Actin in alpha 3, isoform CRA_a | 103575 | 0.278862 | 0.4272 |
| Lancl2 | LanC lantibiotic synthetase component C-like 2 (bacterial) | 51677 | 0.278862 | 0.4628 |
| Ube2n | Ubiquitin-conjugating enzyme E2 N | 17170 | 0.281023 | 0.331163 |
| Ndufs7 | NADH dehydrogenase (ubiquinone) Fe-S protein 7 | 24215 | 0.28196 | 0.212085 |
| Blvrb | Biliverdin reductase B (flavin reductase (NADPH)) | 22194 | 0.283219 | 0.33375 |
| Dynll2 | Dynein light chain 2, cytoplasmic | 10457 | 0.283631 | 0.366812 |
| Atp5j2 | ATP synthase subunit f, mitochondrial | 10503 | 0.283934 | 0.368729 |
| Rab7a | Ras-related protein Rab-7a | 21361 | 0.284329 | 0.440145 |
| Sdhb | Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial | 32607 | 0.287714 | 0.090127 |
| Canx | Calnexin | 67612 | 0.287714 | 0.237333 |
| Pdxp | Pyridoxal phosphate phosphatase | 33380 | 0.287714 | 0.339048 |
| Cdc42 | Cell division control protein 42 homolog | 21696 | 0.292945 | 0.146051 |
| Cars | Cysteinyl-tRNA synthetase (predicted), isoform CRA_b | 86110 | 0.3021 | 0.237333 |
| Cacnb2 | Calcium channel, voltage-dependent, beta 2 subunit, isoform CRA_d | 68596 | 0.3021 | 0.237333 |
| Ppp2r5b | Protein LOC100909468 | 57746 | 0.3021 | 0.34176 |
| Lrrc7 | Leucine-rich repeat-containing protein 7 | 168690 | 0.3021 | 0.356 |
| Ddx5 | DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 | 69709 | 0.3021 | 0.356 |
| Atad3 | ATPase family AAA domain-containing protein 3 | 66889 | 0.3021 | 0.356 |
| Gad2 | Glutamate decarboxylase 2 | 66215 | 0.3021 | 0.356 |
| Sacm1l | Phosphatidylinositide phosphatase SAC1 | 67509 | 0.3021 | 0.356 |
| Clip2 | CAP-Gly domain-containing linker protein 2 | 115975 | 0.3021 | 0.356 |
| Aldh2 | Aldehyde dehydrogenase, mitochondrial | 56994 | 0.314688 | 0.303787 |
| Uqcr10 | Protein Uqcr10 | 7095 | 0.318671 | 0.150211 |
| Pdia3 | Protein disulfide-isomerase | 57499 | 0.3192 | 0.322415 |
| Suclg1 | Succinate-CoA ligase, GDP-forming, alpha subunit, isoform CRA_b 1 | 37935 | 0.336958 | 0.4628 |
| Pacsin1 | Protein kinase C and casein kinase substrate in neurons protein 1 | 50760 | 0.342924 | 0.201217 |
| Atp5o | ATP synthase subunit O, mitochondrial | 23440 | 0.344484 | 0.277985 |
| Btbd8 | Protein Btbd8 | 149108 | 0.345257 | 0.4005 |
| Rpl30 | 60S ribosomal protein L30 | 12947 | 0.355412 | 0.418824 |
| Idh3B | Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial | 42612 | 0.358744 | 0.459717 |
| Hnrnpab | CArG-binding factor A | 30948 | 0.359643 | 0.32752 |
| Ube2o | Protein Ube2o | 126509 | 0.36252 | 0.4272 |
| Pcdh1 | Protein Pcdh1 | 129114 | 0.36252 | 0.4272 |
| Fam49a | Family with sequence similarity 49, member A | 37704 | 0.366182 | 0.2581 |
| Cox6c2 | Cytochrome c oxidase subunit 6C-2 | 8449 | 0.368122 | 0.279335 |
| Cryab | Alpha-crystallin B chain | 20076 | 0.368664 | 0.434441 |
| Hspa5 | 78-kDa glucose-regulated protein | 72473 | 0.369559 | 0.42417 |
| Sfpq | Protein Sfpq | 75210 | 0.372804 | 0.188075 |
| Gsta1 | Glutathione S-transferase | 25360 | 0.375947 | 0.3115 |
| Rac1 | Ras-related C3 botulinum toxin substrate 1 | 24636 | 0.384326 | 0.229125 |
| Pip4k2b | Phosphatidylinositol 5-phosphate 4-kinase type-2 beta | 47633 | 0.384491 | 0.453091 |
| Dnm1l | Dynamin-1-like protein | 84369 | 0.387066 | 0.460283 |
| Ccsap | Protein Ccsap | 28584 | 0.387308 | 0.34176 |
| Cct5 | T-complex protein 1 subunit epsilon | 59955 | 0.390953 | 0.326333 |
| Ehd3 | EH domain-containing protein 3 | 60810 | 0.390953 | 0.403467 |
| Scrn1 | Secernin-1 | 46994 | 0.394043 | 0.1246 |
| Lynx1 | Ly6/neurotoxin 1 (predicted), isoform CRA_a | 13396 | 0.395996 | 0.466649 |
| P11517 | Hemoglobin subunit beta-2 | 16086 | 0.4028 | 0.165568 |
| Map4 | Microtubule-associated protein | 235075 | 0.4028 | 0.2848 |
| Hnrnpm | Isoform 2 of heterogeneous nuclear ribonucleoprotein M | 56864 | 0.4028 | 0.474667 |
| Wdr13 | Protein Wdr13 | 43571 | 0.4028 | 0.258909 |
| Epn2 | Epsin 2 | 68809 | 0.4028 | 0.474667 |
| Atp1a2 | Sodium/potassium-transporting ATPase subunit alpha-2 | 113457 | 0.415242 | 0.495857 |
| LOC684681 | Protein LOC684681 | 21304 | 0.415388 | 0.109045 |
| Pabpc4 | Polyadenylate-binding protein | 71188 | 0.42294 | 0.459355 |
| Atp4a | Sodium/potassium-transporting ATPase subunit alpha | 115674 | 0.435024 | 0.4272 |
| Mog | Myelin-oligodendrocyte glycoprotein | 28153 | 0.441366 | 0.363574 |
| Nono | Non-POU domain-containing octamer-binding protein | 55005 | 0.441531 | 0.449684 |
| Phb2 | Prohibitin-2 | 33148 | 0.444169 | 0.452486 |
| Rhob | Rho-related GTP-binding protein RhoB | 22565 | 0.447108 | 0.37024 |
| Ldha | L-lactate dehydrogenase | 36712 | 0.447414 | 0.415081 |
| Syncrip | Heterogeneous nuclear ribonucleoprotein Q | 62861 | 0.447941 | 0.41296 |
| Rtn4rl2 | Reticulon-4 receptor-like 2 | 46896 | 0.448277 | 0.260488 |
| Gstm3 | Glutathione S-transferase Yb-3 | 25835 | 0.45861 | 0.24935 |
| Atp6v1c1 | V-type proton ATPase subunit C 1 | 44044 | 0.459392 | 0.388364 |
| Palm | Paralemmin-1 | 42072 | 0.459717 | 0.356 |
| Idh3a | Isocitrate dehydrogenase [NAD] subunit, mitochondrial | 41606 | 0.462791 | 0.33802 |
| Acat1 | Acetyl-CoA acetyltransferase, mitochondrial | 45009 | 0.464422 | 0.458576 |
| Rala | Ras-related protein Ral-A | 23709 | 0.468255 | 0.4094 |
| Rpl10a | 60S ribosomal protein L10a | 24987 | 0.469334 | 0.439319 |
| Msn | Moesin | 67899 | 0.469933 | 0.263704 |
| Dlg2 | Disks large homolog 2 | 95331 | 0.474729 | 0.3204 |
| Fam49b | Fam49b protein | 37038 | 0.477949 | 0.251655 |
| Alb | Serum albumin | 70682 | 0.48336 | 0.246206 |
| Tppp | Protein Tppp | 25738 | 0.48336 | 0.362473 |
| Mapk1 | Mitogen-activated protein kinase 1 | 41648 | 0.48336 | 0.4895 |
Proteins that were reduced by more than 50% by both genetic and pharmacological inhibition of nSMase2 are listed
Fig. 7a Rotarod performance (saline vs GW4869 nSMase inhibitor). Histograms represent the time spent by rats injected with saline and rats injected with GW4869 walking on the accelerating rotating rod. Animals were tested 6-h post intrastriatal injection. Data represents the mean and standard error from n = 6 Wistar rats in each group. Each bar in the diagram indicates mean + SEM. b Beam crossing test (saline vs inhibitor). Histograms represent the time spent by rats injected with saline and rats injected with GW4860 to cross the beam. Rats that fell off the beam or were unable to cross the beam successfully after 60 s were given a maximum score of 60 s. Animals were tested 6-h post intrastriatal injection. Data represents the mean and standard error from n = 6 Wistar rats in each group. Each bar in the diagram indicates mean + SEM. Asterisks indicate significant differences compared to controls: *p < 0.05, **p < 0.01, ***p < 0.001
Fig. 8a Rotarod performance (scrambled sense vs antisense). The histograms represent the time spent by rats injected with scrambled sense nSMase2 and rats injected with antisense nSMase2 walking on the accelerating rotating rod. Animals were tested for 5 days post intrastriatal injection. Data represents the mean and standard error from n = 6 Wistar rats in each group. Each bar in the diagram indicates mean + SEM. b Beam crossing test (scrambled sense vs antisense). The histograms represent the time spent by rats injected with saline and rats injected with GW4860 to cross the beam. Rats that fell off the beam or were unable to cross the beam successfully after 60 s were given a maximum score of 60 s. Animals were tested for 5 days post intrastriatal injection. Data represents the mean and standard error from n = 6 Wistar rats in each group. Each bar in the diagram indicates mean + SEM. Asterisks indicate significant differences compared to controls: *p < 0.05, **p < 0.01, ***p < 0.001
Fig. 9a Acoustic startle reflex. Mean percentage differences in auditory startle response before treatment and after intrastriatal saline or GW4869 injection. The acoustic startle response test was conducted 6 h after saline or GW4869 intrastriatal injection. Data represents the mean and standard error from n = 6 Wistar rats in each group. Each bar in the diagram indicates mean + SEM. b Prepulse inhibition. Prepulse inhibitions of the auditory startle response at three prepulse intensities after saline or GW4869 administration. The acoustic startle response test was conducted 6 h after saline or GW4869 intrastriatal injection. Data represents the mean and standard error from n = 6 Wistar rats in each group. Each bar in the diagram indicates mean + SEM. Asterisks indicate significant differences compared to controls: *p < 0.05, **p < 0.01, ***p < 0.001