| Literature DB >> 29038786 |
Marilena Celano1, Francesca Rosignolo2, Valentina Maggisano1, Valeria Pecce2, Michelangelo Iannone3, Diego Russo1, Stefania Bulotta1.
Abstract
Optimal management of patients with thyroid cancer requires the use of sensitive and specific biomarkers. For early diagnosis and effective follow-up, the currently available cytological and serum biomarkers, thyroglobulin and calcitonin, present severe limitations. Research on microRNA expression in thyroid tumors is providing new insights for the development of novel biomarkers that can be used to diagnose thyroid cancer and optimize its management. In this review, we will examine some of the methods commonly used to detect and quantify microRNA in biospecimens from patients with thyroid tumor, as well as the potential applications of these techniques for developing microRNA-based biomarkers for the diagnosis and prognostic evaluation of thyroid cancers.Entities:
Year: 2017 PMID: 29038786 PMCID: PMC5606057 DOI: 10.1155/2017/6496570
Source DB: PubMed Journal: Int J Genomics ISSN: 2314-436X Impact factor: 2.326
Known targets for deregulated miRNAs in thyroid tumors and association with genetic alterations.
| Histotype | miRNA expression (↑/↓)∗ | Oncogenic alteration | Molecular target | Reference |
|---|---|---|---|---|
| PTC | ↑ 146b, 221, 222 | n. d. | KIT | [ |
| ↑ 181b, 221, 222 | n. d. | n. d. | [ | |
| ↑ 187 | RET/PTC, RAS | n. d. | [ | |
| ↑ 146b, 221, 222; ↓ 187 | BRAF V600E | |||
| ↑ 146b | BRAF V600E | n. d. | [ | |
| ↑ 221 | BRAF V600E | n. d. | [ | |
| ∗∗ | ↑ 451 | n.d. | n.d. | [ |
| ↓ 137 | n. d. | CXCL12 | [ | |
| ↓ 451a | n.d. | n.d. | [ | |
| FTC | ↑ 197, 346 | n. d. | n. d. | [ |
| ↑ 181b, 187 | n. d. | n. d. | [ | |
| ↑ 221 | n. d. | n. d. | [ | |
| ↓ 574-3p | ||||
| ↑ 146b, 183, 221 | n. d. | n. d. | [ | |
| ↓ 199b | ||||
| ↓ 199a-5p | n. d. | CTGF | [ | |
| Hürtle | ↑ 187, 197 | n. d. | n. d. | [ |
| ↑ 885-5p | n. d. | n. d. | [ | |
| ↑ 885-5p | n. d. | n. d. | [ | |
| ↓ 138, 768-3p | ||||
| ATC | ↑ 137, 205, 302c | n. d. | n. d. | [ |
| ↑ 221, 222 | n. d. | n. d. | [ | |
| ↑ 146a | n. d. | NF-kB | [ | |
| ↓ 30, 200 | n. d. | n. d. | [ | |
| MTC | ↑ 130a, 138, 193a-3p, 373, 498 | n. d. | n. d. | [ |
| ↓7, 10a,29c, 200b-200c | ||||
| ↑ 9, 21, 127, 154, 183, 224, 323, 370, 375 | n. d. | PDCD4 | [ | |
| ↓ 129-5p | RET | n. d. | [ | |
| ↑ 183, 375 | n. d. | n. d. | [ | |
| ↑ 10a, 375 | n.d. | YAP | [ | |
| ↓455 |
(∗) ↑/↓: upregulated/downregulated; (∗∗): PTC with lymph node metastasis. ATC: anaplastic thyroid carcinoma; BRAF: b-type rapidly accelerated fibrosarcoma; CTGF: connective tissue growth factor; CXCL12: C-X-C motif chemokine ligand 12; FTC: follicular thyroid carcinoma; KIT: proto-oncogene receptor tyrosine kinase; MTC: medullary thyroid carcinoma; n. d.: not determined; PDCD4: programmed cell death 4; PTC: papillary thyroid carcinoma; RAS: rat sarcoma; RET/PTC: rearranged during transfection/papillary thyroid carcinoma; YAP: yes-associated protein.
Figure 1miRNA detection workflow. miRNAs can be isolated from different biospecimens. To isolate miRNAs, widely used methods are chemical and column-based techniques. After quantification step, samples are ready for miRNA profiling. Among widely used techniques, there are four established methods: microarray, quantitative PCR (qRT-PCR), massive parallel sequencing (RNA-seq), and digital PCR (dPCR). The sensitivity and specificity are classified as follows: + (low), ++ (moderate), +++ (high). FFPE: formalin-fixed paraffin embedded; FNA: fine-needle aspiration.
Studies of miRNAs in FNAB samples.
| Samples | Histological diagnosis∗ | miRNA expression (↑/↓)∗∗ | Reference |
|---|---|---|---|
| 8 (malignant) | PTC | ↑ 181b, 221, 222 | [ |
| 62 (8 malignant, 5 benign, 49 n.d.) | 7 PTC, 1 Hürtle | ↑ 146b, 155, 187, 197, 221; 222, 224 | [ |
| 115 (37 malignant, 78 benign) | 10 FTC or Hürtle (27 n.d.) | ↑ 138 | [ |
| 27 (20 malignant, 7 benign) | PTC | ↑ 221 | [ |
| 128 (88 malignant, 40 benign) | 3 ATC, 13 FTC, 72 PTC | ↑ 146b, 187, 221 | [ |
| ↓ 30d | |||
| 141 (58 malignant, 83 benign) | 58 PTC | ↑ 146b, 155, 221 | [ |
| 118 (70 malignant, 48 benign) | 70 PTC | ↑ 146b, 222 | [ |
| 120 (45 malignant, 75 benign) | 1 FTC, 2 ATC, 4 MTC, 8 Hürtle, 30 PTC | ↑ 221, 222 | [ |
| 44 (24 malignant, 20 benign) | 24 FTC | ↓ 148b-3p, 484 | [ |
(∗) related to malign samples; (∗∗) ↑/↓: upregulated/downregulated. ATC: anaplastic thyroid carcinoma; FNAB: fine-needle aspiration biopsy; FTC: follicular thyroid carcinoma; MTC: medullary thyroid carcinoma; PTC: papillary thyroid carcinoma.
Circulating miRNAs as diagnostic biomarkers in thyroid carcinoma.
| Histotype | Sample type | miRNA | Up/downregulated | Reference |
|---|---|---|---|---|
| PTC | Serum | let-7e, 151-5p, 222 | Up | [ |
| Plasma | 146b, 222 | Up | [ | |
| Serum | 190 | Up | [ | |
| 95 | Down | |||
| Plasma | hsa-let7b-5p, hsa-miR-10a-5p, hsa-miR-93-5p, hsa-miR-191 | Up | [ | |
| hsa-miR-146a-5p, hsa-miR-150-5p, hsa-miR-199b-3p, has-miR-342-3p | Down | |||
| Plasma | let-7i, 25-3p, 140-3p, 451a | Up | [ | |
| Plasma | 146b, 155 | Up | [ | |
| Plasma-derived exosomes | 31-5p, 126-3p, 145-5p, 181a | Up | [ | |
| Plasma | 9-3p, 124-3p | Up | [ | |
| Serum | 222 | Up | [ | |
| 21 | Down | |||
| Serum | 24-3p, 28-3p, 103a-3p, 146a-5p, 146b-5p, 191-5p, 221-3p, 222-3p | Up | [ | |
| FTC | Plasma-derived exosomes | 21 | Up | [ |
FTC: follicular thyroid carcinoma; PTC: papillary thyroid carcinoma.
Tissue miRNAs as prognostic biomarkers in PTC.
| miRNA | Tumor size | Multifocality | Capsular invasion | Vascular invasion | ETE | LN metastases | Distant metastases | Overall survival | TNM stage | ATA risk | References |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1179 | ∗ | Rosignolo et al. [ | |||||||||
| 125b | ∗ | Geraldo and Kimura [ | |||||||||
| 135b | ∗ | ∗ | Wang et al. [ | ||||||||
| 138 | ∗ | Geraldo and Kimura [ | |||||||||
| 146a | ∗ | ∗ | ∗ | ∗ | Sun et al. [ | ||||||
| 146b | ∗ | ∗ | ∗ | ∗ | ∗ | ∗ | ∗ | ∗ | ∗ | ∗ | Wang et al. [ |
| 146b-3p | ∗ | Rosignolo et al. [ | |||||||||
| 146b-5p | ∗ | Rosignolo et al. [ | |||||||||
| 181b | ∗ | Sun et al. [ | |||||||||
| 199a-3p/199b-3p | ∗ | Rosignolo et al. [ | |||||||||
| Rosignolo et al. [ | |||||||||||
| 199b-5p | ∗ | ∗ | Peng et al. [ | ||||||||
| 203 | ∗ | Geraldo and Kimura [ | |||||||||
| 204-5p | ∗ | Rosignolo et al. [ | |||||||||
| 21 | ∗ | Geraldo and Kimura [ | |||||||||
| 21-3p | ∗ | Huang et al. [ | |||||||||
| 21-5p | ∗ | Rosignolo et al. [ | |||||||||
| 221 | ∗ | ∗ | ∗ ∗ | ∗ | ∗ | ∗ | ∗ | ∗ | Wang et al. [ | ||
| 222 | ∗ | ∗ | ∗ | ∗ | ∗ | ∗ | ∗ | Wang et al. [ | |||
| 222-3p | ∗ | Rosignolo et al. [ | |||||||||
| 30a | ∗ | Geraldo and Kimura [ | |||||||||
| 31-5p | ∗ | Rosignolo et al. [ | |||||||||
| 7–2-3p | ∗ | Rosignolo et al. [ | |||||||||
| let-7c | ∗ | Geraldo and Kimura [ |
∗: information included in indicated studies; ATA: American Thyroid Association; ETE: extrathyroidal extension; LN: lymph node.
Circulating miRNAs as prognostic biomarkers for PTC follow-up.
| Study | Number of cases | Samples | miRNA | Findings |
|---|---|---|---|---|
| Yu et al. [ | 9 | Pre- and postoperative serum (5–15 days) | 151-5p, 222 | Decreased after tumor excision |
| Lee et al. [ | 32 | Pre- and postoperative plasma (2–6 weeks) | 221, 222, 146b | Decreased after tumor excision |
| Li et al. [ | 7 | Pre- and postoperative plasma (4–7 days) | 25-3p, 451a | Decreased after tumor excision |
| Samsonov et al. [ | 10 | Pre- and postoperative plasma-derived exosomes (7–10 days) | 126-3p, 145-5p, 146a-5p, 181a-5p, 206, 21-5p, 221-3p, 223-3p, 31-5p | Decreased after tumor excision |
| Yoruker et al. [ | 31 | Pre- and postoperative serum (5 weeks) | 221, 222, 151-5p, 31 | Decreased after tumor excision |
| Rosignolo et al. [ | 44 | Pre- and postoperative serum (30 days) | 146a-5p, 221-3p, 222-3p, 146b-5p, 28-3p, 103a-3p, 191-5p, 24-3p | Decreased after tumor excision |
PTC: papillary thyroid carcinoma.