Literature DB >> 29033129

Genome-Nuclear Lamina Interactions Regulate Cardiac Stem Cell Lineage Restriction.

Andrey Poleshko1, Parisha P Shah1, Mudit Gupta1, Apoorva Babu1, Michael P Morley1, Lauren J Manderfield1, Jamie L Ifkovits1, Damelys Calderon2, Haig Aghajanian1, Javier E Sierra-Pagán1, Zheng Sun3, Qiaohong Wang1, Li Li1, Nicole C Dubois2, Edward E Morrisey1, Mitchell A Lazar3, Cheryl L Smith1, Jonathan A Epstein4, Rajan Jain5.   

Abstract

Progenitor cells differentiate into specialized cell types through coordinated expression of lineage-specific genes and modification of complex chromatin configurations. We demonstrate that a histone deacetylase (Hdac3) organizes heterochromatin at the nuclear lamina during cardiac progenitor lineage restriction. Specification of cardiomyocytes is associated with reorganization of peripheral heterochromatin, and independent of deacetylase activity, Hdac3 tethers peripheral heterochromatin containing lineage-relevant genes to the nuclear lamina. Deletion of Hdac3 in cardiac progenitor cells releases genomic regions from the nuclear periphery, leading to precocious cardiac gene expression and differentiation into cardiomyocytes; in contrast, restricting Hdac3 to the nuclear periphery rescues myogenesis in progenitors otherwise lacking Hdac3. Our results suggest that availability of genomic regions for activation by lineage-specific factors is regulated in part through dynamic chromatin-nuclear lamina interactions and that competence of a progenitor cell to respond to differentiation signals may depend upon coordinated movement of responding gene loci away from the nuclear periphery.
Copyright © 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  cardiac specification; cellular competence; genome organization; lineage restriction; nuclear lamina

Mesh:

Substances:

Year:  2017        PMID: 29033129      PMCID: PMC5683101          DOI: 10.1016/j.cell.2017.09.018

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  54 in total

1.  DNA sequence-dependent compartmentalization and silencing of chromatin at the nuclear lamina.

Authors:  Joseph M Zullo; Ignacio A Demarco; Roger Piqué-Regi; Daniel J Gaffney; Charles B Epstein; Chauncey J Spooner; Teresa R Luperchio; Bradley E Bernstein; Jonathan K Pritchard; Karen L Reddy; Harinder Singh
Journal:  Cell       Date:  2012-06-22       Impact factor: 41.582

2.  Clonal hematopoiesis associated with TET2 deficiency accelerates atherosclerosis development in mice.

Authors:  José J Fuster; Susan MacLauchlan; María A Zuriaga; Maya N Polackal; Allison C Ostriker; Raja Chakraborty; Chia-Ling Wu; Soichi Sano; Sujatha Muralidharan; Cristina Rius; Jacqueline Vuong; Sophia Jacob; Varsha Muralidhar; Avril A B Robertson; Matthew A Cooper; Vicente Andrés; Karen K Hirschi; Kathleen A Martin; Kenneth Walsh
Journal:  Science       Date:  2017-01-19       Impact factor: 47.728

3.  An EDMD mutation in C. elegans lamin blocks muscle-specific gene relocation and compromises muscle integrity.

Authors:  Anna Mattout; Brietta L Pike; Benjamin D Towbin; Erin M Bank; Adriana Gonzalez-Sandoval; Michael B Stadler; Peter Meister; Yosef Gruenbaum; Susan M Gasser
Journal:  Curr Biol       Date:  2011-09-29       Impact factor: 10.834

4.  Diet-induced lethality due to deletion of the Hdac3 gene in heart and skeletal muscle.

Authors:  Zheng Sun; Nikhil Singh; Shannon E Mullican; Logan J Everett; Li Li; Lijun Yuan; Xi Liu; Jonathan A Epstein; Mitchell A Lazar
Journal:  J Biol Chem       Date:  2011-08-01       Impact factor: 5.157

5.  Stage-specific optimization of activin/nodal and BMP signaling promotes cardiac differentiation of mouse and human pluripotent stem cell lines.

Authors:  Steven J Kattman; Alec D Witty; Mark Gagliardi; Nicole C Dubois; Maryam Niapour; Akitsu Hotta; James Ellis; Gordon Keller
Journal:  Cell Stem Cell       Date:  2011-02-04       Impact factor: 24.633

Review 6.  Spinning the web of cell fate.

Authors:  Kevin Van Bortle; Victor G Corces
Journal:  Cell       Date:  2013-03-14       Impact factor: 41.582

7.  Developmentally regulated subnuclear genome reorganization restricts neural progenitor competence in Drosophila.

Authors:  Minoree Kohwi; Joshua R Lupton; Sen-Lin Lai; Michael R Miller; Chris Q Doe
Journal:  Cell       Date:  2013-01-17       Impact factor: 41.582

8.  The nuclear envelope proteome differs notably between tissues.

Authors:  Nadia Korfali; Gavin S Wilkie; Selene K Swanson; Vlastimil Srsen; Jose de Las Heras; Dzmitry G Batrakou; Poonam Malik; Nikolaj Zuleger; Alastair R W Kerr; Laurence Florens; Eric C Schirmer
Journal:  Nucleus       Date:  2012-09-18       Impact factor: 4.197

Review 9.  Nuclear lamins: key regulators of nuclear structure and activities.

Authors:  Miron Prokocimer; Maya Davidovich; Malka Nissim-Rafinia; Naama Wiesel-Motiuk; Daniel Z Bar; Rachel Barkan; Eran Meshorer; Yosef Gruenbaum
Journal:  J Cell Mol Med       Date:  2009-02-04       Impact factor: 5.310

10.  Directed targeting of chromatin to the nuclear lamina is mediated by chromatin state and A-type lamins.

Authors:  Jennifer C Harr; Teresa Romeo Luperchio; Xianrong Wong; Erez Cohen; Sarah J Wheelan; Karen L Reddy
Journal:  J Cell Biol       Date:  2015-01-05       Impact factor: 10.539

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  60 in total

1.  LAP2 Proteins Chaperone GLI1 Movement between the Lamina and Chromatin to Regulate Transcription.

Authors:  Amar N Mirza; Siegen A McKellar; Nicole M Urman; Alexander S Brown; Tyler Hollmig; Sumaira Z Aasi; Anthony E Oro
Journal:  Cell       Date:  2018-11-29       Impact factor: 41.582

2.  Lineage-specific reorganization of nuclear peripheral heterochromatin and H3K9me2 domains.

Authors:  Kelvin See; Yemin Lan; Joshua Rhoades; Rajan Jain; Cheryl L Smith; Jonathan A Epstein
Journal:  Development       Date:  2019-02-05       Impact factor: 6.868

3.  Direct visualization of cardiac transcription factories reveals regulatory principles of nuclear architecture during pathological remodeling.

Authors:  Elaheh Karbassi; Manuel Rosa-Garrido; Douglas J Chapski; Yong Wu; Shuxun Ren; Yibin Wang; Enrico Stefani; Thomas M Vondriska
Journal:  J Mol Cell Cardiol       Date:  2019-02-08       Impact factor: 5.000

4.  CELL FATE DETERMINATION IN 3D: REGULATION OF GENE EXPRESSION VIA CHROMATIN INTERACTIONS WITH THE NUCLEAR MEMBRANE.

Authors:  Jonathan A Epstein
Journal:  Trans Am Clin Climatol Assoc       Date:  2018

Review 5.  Spatial chromatin organization and gene regulation at the nuclear lamina.

Authors:  Isabel Guerreiro; Jop Kind
Journal:  Curr Opin Genet Dev       Date:  2019-05-18       Impact factor: 5.578

6.  Dynamic Lamin B1-Gene Association During Oligodendrocyte Progenitor Differentiation.

Authors:  Camila Yattah; Marylens Hernandez; Dennis Huang; HyeJin Park; Will Liao; Patrizia Casaccia
Journal:  Neurochem Res       Date:  2020-02-04       Impact factor: 3.996

7.  A Lamina-Associated Domain Border Governs Nuclear Lamina Interactions, Transcription, and Recombination of the Tcrb Locus.

Authors:  Shiwei Chen; Teresa Romeo Luperchio; Xianrong Wong; Europe B Doan; Aaron T Byrd; Kingshuk Roy Choudhury; Karen L Reddy; Michael S Krangel
Journal:  Cell Rep       Date:  2018-11-13       Impact factor: 9.423

8.  Histone acetyltransferase inhibition rescues differentiation of emerin-deficient myogenic progenitors.

Authors:  Katherine A Bossone; Joseph A Ellis; James M Holaska
Journal:  Muscle Nerve       Date:  2020-05-06       Impact factor: 3.217

Review 9.  "Looping In" Mechanics: Mechanobiologic Regulation of the Nucleus and the Epigenome.

Authors:  Eric N Dai; Su-Jin Heo; Robert L Mauck
Journal:  Adv Healthc Mater       Date:  2020-04-14       Impact factor: 9.933

10.  Paradoxical association of TET loss of function with genome-wide DNA hypomethylation.

Authors:  Isaac F López-Moyado; Ageliki Tsagaratou; Hiroshi Yuita; Hyungseok Seo; Benjamin Delatte; Sven Heinz; Christopher Benner; Anjana Rao
Journal:  Proc Natl Acad Sci U S A       Date:  2019-08-01       Impact factor: 11.205

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