Literature DB >> 12520303

The plant MITE mPing is mobilized in anther culture.

Kazuhiro Kikuchi1, Kazuki Terauchi, Masamitsu Wada, Hiro-Yuki Hirano.   

Abstract

Transposable elements constitute a large portion of eukaryotic genomes and contribute to their evolution and diversification. Miniature inverted-repeat transposable elements (MITEs) constitute one of the main groups of transposable elements and are distributed ubiquitously in the genomes of plants and animals such as maize, rice, Arabidopsis, human, insect and nematode. Because active MITEs have not been identified, the transposition mechanism of MITEs and their accumulation in eukaryotic genomes remain poorly understood. Here we describe a new class of MITE, called miniature Ping (mPing), in the genome of Oryza sativa (rice). mPing elements are activated in cells derived from anther culture, where they are excised efficiently from original sites and reinserted into new loci. An mPing-associated Ping element, which has a putative PIF family transposase, is implicated in the recent proliferation of this MITE family in a subspecies of rice.

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Year:  2003        PMID: 12520303     DOI: 10.1038/nature01218

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  107 in total

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Review 2.  The effect of stress on genome regulation and structure.

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Review 4.  Recent progress in the understanding of tissue culture-induced genome level changes in plants and potential applications.

Authors:  Anjanasree K Neelakandan; Kan Wang
Journal:  Plant Cell Rep       Date:  2011-12-17       Impact factor: 4.570

5.  Analysis of copy-number variation, insertional polymorphism, and methylation status of the tiniest class I (TRIM) and class II (MITE) transposable element families in various rice strains.

Authors:  Omer Baruch; Khalil Kashkush
Journal:  Plant Cell Rep       Date:  2011-12-20       Impact factor: 4.570

6.  Marker utility of miniature inverted-repeat transposable elements for wheat biodiversity and evolution.

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7.  A single-base substitution suppresses flower color mutation caused by a novel miniature inverted-repeat transposable element in gentian.

Authors:  Masahiro Nishihara; Takashi Hikage; Eri Yamada; Takashi Nakatsuka
Journal:  Mol Genet Genomics       Date:  2011-10-15       Impact factor: 3.291

Review 8.  The gymnastics of epigenomics in rice.

Authors:  Aditya Banerjee; Aryadeep Roychoudhury
Journal:  Plant Cell Rep       Date:  2017-09-02       Impact factor: 4.570

9.  Transposition of the rice miniature inverted repeat transposable element mPing in Arabidopsis thaliana.

Authors:  Guojun Yang; Feng Zhang; C Nathan Hancock; Susan R Wessler
Journal:  Proc Natl Acad Sci U S A       Date:  2007-06-19       Impact factor: 11.205

10.  Somaclonal variation at the nucleotide sequence level in rice (Oryza sativa L.) as revealed by RAPD and ISSR markers, and by pairwise sequence analysis.

Authors:  Fredéric Ngezahayo; Yingshan Dong; Bao Liu
Journal:  J Appl Genet       Date:  2007       Impact factor: 3.240

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