| Literature DB >> 28972976 |
John L Moran1, John Santamaria2.
Abstract
OBJECTIVES: There has been renewed interest in lactate as a risk biomarker in sepsis and septic shock. However, the ability of the odds ratio (OR) and change in the area under the receiver operator characteristic curve (AUC-ROC) to assess biomarker added-value has been questioned. DESIGN, SETTING AND PARTICIPANTS: A sepsis cohort was identified from the ICU database of an Australian tertiary referral hospital using APACHE III diagnostic codes. Demographic information, APACHE III scores, 24-hour post-admission patient lactate levels, and hospital mortality were accessed.Entities:
Mesh:
Substances:
Year: 2017 PMID: 28972976 PMCID: PMC5626033 DOI: 10.1371/journal.pone.0185320
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
| Model | Functionals | Development |
|---|---|---|
| Initial logistic | Non-linear covariate effects (fractional polnomials) | Information criteria: AIC, BIC |
| Interactions | Discrimination: AUC-ROC | |
| Collinearity check | Calibration: Hosmer-Lemeshow test | |
| Polynomial calibration plots | ||
| In-sample and out-of-sample predictive bias | ||
| Overfitting | ||
| Lactate added | ||
| Lactate form | Initial lactate | |
| Fractional lactate clearance: (admission-final)/admission | ||
| Area under lactate-time curve | ||
| Sensitivity analysis: | ||
| Lactate change: admission-final | ||
| Lactate ratio: final/admission | ||
| Log lactate ratio: log(final/admission) | ||
| Added value | ||
| AUC-ROC difference | ||
| Net reclassification index (NRI) | Bootstrapped confidence intervals | |
| Integrated discrimination improvement index (IDI) | Bootstrapped confidence intervals | |
| Net benefit |
Fig 1Univariate predictors of hospital mortality.
Fig 2Univariate net benefit curves.
Model parameter estimates, diagnostics and risk reclassification measures: Initial lactate.
| Odds Ratio | P | Lower 95%CI | Upper 95% CI | |
| Age (years) | 1.032 | 0.000 | 1.015 | 1.048 |
| CCI: FP 0.5 | 0.199 | 0.023 | 0.049 | 0.800 |
| CCI: FP 3 | 40.045 | 0.000 | 13.043 | 122.948 |
| Cirrhosis | 3.669 | 0.004 | 1.497 | 8.990 |
| Coma | 80.901 | 0.000 | 14.846 | 440.857 |
| MPM_O_HR | 5.680 | 0.002 | 1.854 | 17.403 |
| Lactate | 1.127 | 0.005 | 1.038 | 1.224 |
| Year 2 | 1.044 | 0.917 | 0.465 | 2.343 |
| Year 3 | 0.627 | 0.219 | 0.298 | 1.320 |
| Year 4 | 0.913 | 0.803 | 0.447 | 1.867 |
| Year 5 | 0.400 | 0.013 | 0.194 | 0.824 |
| Year 6 | 0.449 | 0.036 | 0.213 | 0.949 |
| Year 7 | 0.387 | 0.058 | 0.145 | 1.034 |
| Hosmer-Lemeshow statistic | 0.580 | |||
| AUC-ROC | 0.785(0.727, 0.819) | |||
| Condition number | 11.8 | |||
| In-sample bias | 0.97% | |||
| Over-fitting | 7.8% | |||
| Out-of-sample-bias | 8.7% | |||
| Estimate | P | Lower 95%CI | Upper 95% CI | |
| Event | -0.241 | -0.375 | -0.071 | |
| Non-event | 0.481 | 0.370 | 0.577 | |
| Overall | 0.240 | 0.030 | 0.464 | |
| Event | 0.007 | -0.0001 | 0.030 | |
| Non-event | 0.002 | -0.0001 | 0.008 | |
| Overall | 0.010 | -0.0001 | 0.038 | |
| AUC-ROC difference | 0.003 | 0.061 | -0.004 | 0.016 |
CCI, Charlson comorbidity index. FP, fractional polynomial. HR, heart rate. H-L, Hosmer-Lemeshow
AUC-ROC, area under the receiver operator characteristic curve. diff, difference (model with and without lactate). NRI(>0), category free net reclassification index. IDI, integrated discrimination improvement index.
Fig 3Calibration plot for admission model with initial lactate.
Fig 4Decision curve analysis: Net benefit for admission model, with and without initial lactate.
Model parameter estimates, diagnostics and risk reclassification measures.
| Odds Ratio | P | Lower 95%CI | Upper 95% CI | |
| Age (years) | 1.026 | 0.001 | 1.011 | 1.042 |
| CCI: FP 0.5 | 0.232 | 0.032 | 0.061 | 0.882 |
| CCI: FP 3 | 23.086 | 0.000 | 8.356 | 63.784 |
| Cirrhosis | 3.259 | 0.008 | 1.371 | 7.750 |
| Lactate | 1.201 | 0.000 | 1.120 | 1.289 |
| Year 2 | 1.058 | 0.885 | 0.494 | 2.266 |
| Year 3 | 0.639 | 0.214 | 0.315 | 1.296 |
| Year 4 | 0.920 | 0.809 | 0.467 | 1.813 |
| Year 5 | 0.433 | 0.016 | 0.220 | 0.854 |
| Year 6 | 0.407 | 0.016 | 0.196 | 0.848 |
| Year 7 | 0.482 | 0.114 | 0.195 | 1.191 |
| Hosmer-Lemeshow statistic | 0.770 | |||
| AUC-ROC | 0.740(0.675, 0.777) | |||
| Estimate | P | Lower 95%CI | Upper 95% CI | |
| Event | -0.186 | -0.316 | -0.026 | |
| Non-event | 0.604 | 0.467 | 0.657 | |
| Overall | 0.418 | 0.185 | 0.587 | |
| Event | 0.031 | 0.009 | 0.066 | |
| Non-event | 0.008 | 0.002 | 0.018 | |
| Overall | 0.040 | 0.0120 | 0.084 | |
| AUC-ROC difference | 0.033 | 0.031 | 0.008 | 0.065 |
CCI, Charlson comorbidity index. FP, fractional polynomial. HR, heart rate. H-L, Hosmer-Lemeshow
AUC-ROC, area under the receiver operator characteristic curve. diff, difference (model with and without lactate). NRI(>0), category free net reclassification index. IDI, integrated discrimination improvement index.
Fig 5Decision curve analysis: Net benefit for abbreviated admission model, with and without initial lactate.
Model parameter estimates, diagnostics and risk reclassification measures: Lactate clearance.
| Odds Ratio | P | Lower 95%CI | Upper 95% CI | |
| Age (years) | 1.017 | 0.057 | 1.000 | 1.035 |
| CCI: FP 0.5 | 0.237 | 0.047 | 0.057 | 0.983 |
| CCI: FP 3 | 28.496 | 0.000 | 8.336 | 97.411 |
| APACHE III score: FP 3 | 7.182 | 0.000 | 4.181 | 12.337 |
| Coma | 11.646 | 0.021 | 1.458 | 93.036 |
| Cirrhosis | 2.955 | 0.029 | 1.118 | 7.809 |
| Clearance | 0.771 | 0.078 | 0.578 | 1.030 |
| Year 2 | 1.433 | 0.417 | 0.602 | 3.412 |
| Year 3 | 0.829 | 0.658 | 0.361 | 1.905 |
| Year 4 | 1.053 | 0.898 | 0.478 | 2.321 |
| Year 5 | 0.472 | 0.067 | 0.211 | 1.055 |
| Year 6 | 0.623 | 0.277 | 0.266 | 1.462 |
| Year 7 | 0.377 | 0.098 | 0.119 | 1.197 |
| Hosmer-Lemeshow statistic | 0.470 | |||
| AUC-ROC | 0.838(0.784, 0.865) | |||
| Condition number | 11.8 | |||
| In-sample bias | 1.45% | |||
| Over-fitting | 5.6% | |||
| Out-of-sample-bias | 6.9% | |||
| Estimate | P | Lower 95%CI | Upper 95% CI | |
| Event | -0.135 | -0.310 | 0.217 | |
| Non-event | 0.244 | -0.112 | 0.416 | |
| Overall | 0.109 | -0.193 | 0.425 | |
| Event | 0.002 | -0.003 | 0.016 | |
| Non-event | 0.001 | -0.001 | 0.004 | |
| Overall | 0.002 | -0.0030 | 0.020 | |
| AUC-ROC difference | 0.001 | 0.78 | -0.003 | 0.014 |
CCI, Charlson comorbidity index. FP, fractional polynomial. H-L, Hosmer-Lemeshow
AUC-ROC, area under the receiver operator characteristic curve. diff, difference (model with and without clearance). NRI(>0), category free net reclassification index. IDI, integrated discrimination improvement index.
Fig 6Decision curve analysis: Net benefit for 24-hour model, with and without clearance.
Model parameter estimates, diagnostics and risk reclassification measures: AUC-lactate.
| Odds Ratio | P | Lower 95%CI | Upper 95% CI | |
| Age (years) | 1.010 | 0.278 | 0.992 | 1.029 |
| CCI: FP 0.5 | 0.284 | 0.068 | 0.073 | 1.097 |
| CCI: FP 3 | 33.894 | 0.000 | 9.423 | 121.918 |
| APACHE III score: FP 3 | 7.337 | 0.000 | 3.991 | 13.488 |
| Coma | 12.620 | 0.031 | 1.258 | 126.555 |
| Cirrhosis | 2.308 | 0.107 | 0.834 | 6.382 |
| AUC-lactate | 0.997 | 0.494 | 0.989 | 1.005 |
| Year 2 | 1.484 | 0.397 | 0.595 | 3.703 |
| Year 3 | 0.820 | 0.661 | 0.339 | 1.986 |
| Year 4 | 1.018 | 0.966 | 0.440 | 2.360 |
| Year 5 | 0.481 | 0.087 | 0.207 | 1.114 |
| Year 6 | 0.641 | 0.333 | 0.261 | 1.576 |
| Year 7 | 0.404 | 0.124 | 0.127 | 1.282 |
| Hosmer-Lemeshow statistic | 0.180 | |||
| AUC-ROC | 0.823(0.766, 0.840) | |||
| Condition number | 6.7 | |||
| In-sample bias | 1.03% | |||
| Over-fitting | 4.9% | |||
| Out-of-sample-bias | 6.03% | |||
| Estimate | P | Lower 95%CI | Upper 95% CI | |
| Event | 0.328 | -0.349 | 0.468 | |
| Non-event | -0.217 | -0.284 | 0.352 | |
| Overall | 0.111 | -0.222 | 0.403 | |
| Event | -0.0001 | -0.004 | 0.008 | |
| Non-event | -0.0001 | -0.001 | 0.002 | |
| Overall | 0.002 | -0.0010 | 0.010 | |
| AUC-ROC difference | -0.002 | 0.340 | -0.004 | 0.005 |
CCI, Charlson comorbidity index. APIII, APACHE III. FP, fractional polynomial. AUC-lactate, area under the lactate-time curve. H-L, Hosmer-Lemeshow AUC-ROC, area under the receiver operator characteristic curve. diff, difference (model with and without area under the lactate-time curve). NRI(>0), category free net reclassification index. IDI, integrated discrimination improvement index.