Literature DB >> 20172362

Traditional statistical methods for evaluating prediction models are uninformative as to clinical value: towards a decision analytic framework.

Andrew J Vickers1, Angel M Cronin.   

Abstract

Cancer prediction models are becoming ubiquitous, yet we generally have no idea whether they do more good than harm. This is because current statistical methods for evaluating prediction models are uninformative as to their clinical value. Prediction models are typically evaluated in terms of discrimination or calibration. However, it is generally unclear how high discrimination needs to be before it is considered "high enough"; similarly, there are no rational guidelines as to the degree of miscalibration that would discount clinical use of a model. Classification tables do present the results of models in more clinically relevant terms, but it is not always clear which of two models is preferable on the basis of a particular classification table, or even whether either model should be used at all. Recent years have seen the development of straightforward decision analytic techniques that evaluate prediction models in terms of their consequences. This depends on the simple approach of weighting true and false positives differently, to reflect that, for example, delaying the diagnosis of a cancer is more harmful than an unnecessary biopsy. Such decision analytic techniques hold the promise of determining whether clinical implementation of prediction models would do more good than harm. Copyright 2010 Elsevier Inc. All rights reserved.

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Year:  2010        PMID: 20172362      PMCID: PMC2857322          DOI: 10.1053/j.seminoncol.2009.12.004

Source DB:  PubMed          Journal:  Semin Oncol        ISSN: 0093-7754            Impact factor:   4.929


  33 in total

1.  Good generalizability of a prediction rule for prediction of persistent shoulder pain in the short term.

Authors:  Ton Kuijpers; Geert J M G van der Heijden; Yvonne Vergouwe; Jos W R Twisk; A Joan P Boeke; Lex M Bouter; Daniëlle A W M van der Windt
Journal:  J Clin Epidemiol       Date:  2007-05-04       Impact factor: 6.437

2.  Validation of predictive models for germline mutations in DNA mismatch repair genes in colorectal cancer.

Authors:  Jose G Monzon; Carol Cremin; Linlea Armstrong; Jennifer Nuk; Sean Young; Doug E Horsman; Kristy Garbutt; Chris D Bajdik; Sharlene Gill
Journal:  Int J Cancer       Date:  2010-02-15       Impact factor: 7.396

3.  Independent validation of a model predicting the need for packed red blood cell transfusion at liver transplantation.

Authors:  Luc Massicotte; Umberto Capitanio; Danielle Beaulieu; Jean-Denis Roy; André Roy; Pierre I Karakiewicz
Journal:  Transplantation       Date:  2009-08-15       Impact factor: 4.939

4.  Prediction VO2max during cycle ergometry based on submaximal ventilatory indicators.

Authors:  Rodolfo Alkmim Moreira Nunes; Rodrigo Gomes de Souza Vale; Roberto Simão; Belmiro Freitas de Salles; Victor Machado Reis; Jefferson da Silva Novaes; Humberto Miranda; Matthew R Rhea; Aldo da Cunha Medeiros
Journal:  J Strength Cond Res       Date:  2009-09       Impact factor: 3.775

5.  A preoperative nomogram for disease recurrence following radical prostatectomy for prostate cancer.

Authors:  M W Kattan; J A Eastham; A M Stapleton; T M Wheeler; P T Scardino
Journal:  J Natl Cancer Inst       Date:  1998-05-20       Impact factor: 13.506

6.  Risk assessment among prostate cancer patients receiving primary androgen deprivation therapy.

Authors:  Matthew R Cooperberg; Shiro Hinotsu; Mikio Namiki; Kazuto Ito; Jeanette Broering; Peter R Carroll; Hideyuki Akaza
Journal:  J Clin Oncol       Date:  2009-08-10       Impact factor: 44.544

7.  Decision curve analysis: a novel method for evaluating prediction models.

Authors:  Andrew J Vickers; Elena B Elkin
Journal:  Med Decis Making       Date:  2006 Nov-Dec       Impact factor: 2.583

8.  Multi-institutional external validation of seminal vesicle invasion nomograms: head-to-head comparison of Gallina nomogram versus 2007 Partin tables.

Authors:  Kevin C Zorn; Umberto Capitanio; Claudio Jeldres; Philippe Arjane; Paul Perrotte; Shahrokh F Shariat; David I Lee; Arieh L Shalhav; Gregory P Zagaja; Sergey A Shikanov; Ofer N Gofrit; Alan E Thong; David M Albala; Leon Sun; Pierre I Karakiewicz
Journal:  Int J Radiat Oncol Biol Phys       Date:  2008-10-19       Impact factor: 7.038

Review 9.  Are scores useful in advanced heart failure?

Authors:  Livia Goldraich; Luis Beck-da-Silva; Nadine Clausell
Journal:  Expert Rev Cardiovasc Ther       Date:  2009-08

10.  Using clinical factors and mammographic breast density to estimate breast cancer risk: development and validation of a new predictive model.

Authors:  Jeffrey A Tice; Steven R Cummings; Rebecca Smith-Bindman; Laura Ichikawa; William E Barlow; Karla Kerlikowske
Journal:  Ann Intern Med       Date:  2008-03-04       Impact factor: 25.391

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  34 in total

Review 1.  Everything you always wanted to know about evaluating prediction models (but were too afraid to ask).

Authors:  Andrew J Vickers; Angel M Cronin
Journal:  Urology       Date:  2010-10-27       Impact factor: 2.649

2.  Factors Affecting Sentinel Node Metastasis in Thin (T1) Cutaneous Melanomas: Development and External Validation of a Predictive Nomogram.

Authors:  Andrea Maurichi; Rosalba Miceli; Hanna Eriksson; Julia Newton-Bishop; Jérémie Nsengimana; May Chan; Andrew J Hayes; Kara Heelan; David Adams; Roberto Patuzzo; Francesco Barretta; Gianfranco Gallino; Catherine Harwood; Daniele Bergamaschi; Dorothy Bennett; Konstantinos Lasithiotakis; Paola Ghiorzo; Bruna Dalmasso; Ausilia Manganoni; Francesca Consoli; Ilaria Mattavelli; Consuelo Barbieri; Andrea Leva; Umberto Cortinovis; Vittoria Espeli; Cristina Mangas; Pietro Quaglino; Simone Ribero; Paolo Broganelli; Giovanni Pellacani; Caterina Longo; Corrado Del Forno; Lorenzo Borgognoni; Serena Sestini; Nicola Pimpinelli; Sara Fortunato; Alessandra Chiarugi; Paolo Nardini; Elena Morittu; Antonio Florita; Mara Cossa; Barbara Valeri; Massimo Milione; Giancarlo Pruneri; Odysseas Zoras; Andrea Anichini; Roberta Mortarini; Mario Santinami
Journal:  J Clin Oncol       Date:  2020-03-13       Impact factor: 44.544

3.  Assessing the Clinical Impact of Risk Prediction Models With Decision Curves: Guidance for Correct Interpretation and Appropriate Use.

Authors:  Kathleen F Kerr; Marshall D Brown; Kehao Zhu; Holly Janes
Journal:  J Clin Oncol       Date:  2016-05-31       Impact factor: 44.544

4.  Modeling the risk of esophageal squamous cell carcinoma and squamous dysplasia in a high risk area in Iran.

Authors:  Arash Etemadi; Christian C Abnet; Asieh Golozar; Reza Malekzadeh; Sanford M Dawsey
Journal:  Arch Iran Med       Date:  2012-01       Impact factor: 1.354

5.  Development and Validation of the PREMM5 Model for Comprehensive Risk Assessment of Lynch Syndrome.

Authors:  Fay Kastrinos; Hajime Uno; Chinedu Ukaegbu; Carmelita Alvero; Ashley McFarland; Matthew B Yurgelun; Matthew H Kulke; Deborah Schrag; Jeffrey A Meyerhardt; Charles S Fuchs; Robert J Mayer; Kimmie Ng; Ewout W Steyerberg; Sapna Syngal
Journal:  J Clin Oncol       Date:  2017-05-10       Impact factor: 44.544

6.  Fracture risk assessment: state of the art, methodologically unsound, or poorly reported?

Authors:  Gary S Collins; Karl Michaëlsson
Journal:  Curr Osteoporos Rep       Date:  2012-09       Impact factor: 5.096

Review 7.  Evaluation of markers and risk prediction models: overview of relationships between NRI and decision-analytic measures.

Authors:  Ben Van Calster; Andrew J Vickers; Michael J Pencina; Stuart G Baker; Dirk Timmerman; Ewout W Steyerberg
Journal:  Med Decis Making       Date:  2013-01-11       Impact factor: 2.583

8.  The Net Reclassification Index (NRI): a Misleading Measure of Prediction Improvement Even with Independent Test Data Sets.

Authors:  Margaret S Pepe; Jing Fan; Ziding Feng; Thomas Gerds; Jorgen Hilden
Journal:  Stat Biosci       Date:  2014-08-23

9.  Comparison of Prediction Models for Lynch Syndrome Among Individuals With Colorectal Cancer.

Authors:  Fay Kastrinos; Rohit P Ojha; Celine Leenen; Carmelita Alvero; Rowena C Mercado; Judith Balmaña; Irene Valenzuela; Francesc Balaguer; Roger Green; Noralane M Lindor; Stephen N Thibodeau; Polly Newcomb; Aung Ko Win; Mark Jenkins; Daniel D Buchanan; Lucio Bertario; Paola Sala; Heather Hampel; Sapna Syngal; Ewout W Steyerberg
Journal:  J Natl Cancer Inst       Date:  2015-11-18       Impact factor: 13.506

10.  Development and External Validation of Prediction Models for 10-Year Survival of Invasive Breast Cancer. Comparison with PREDICT and CancerMath.

Authors:  Solon Karapanagiotis; Paul D P Pharoah; Christopher H Jackson; Paul J Newcombe
Journal:  Clin Cancer Res       Date:  2018-02-14       Impact factor: 12.531

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