Literature DB >> 28960972

Vanadyl as a Stable Structural Mimic of Reactive Ferryl Intermediates in Mononuclear Nonheme-Iron Enzymes.

Ryan J Martinie, Christopher J Pollock, Megan L Matthews1, J Martin Bollinger, Carsten Krebs, Alexey Silakov.   

Abstract

The iron(II)- and 2-(oxo)glutarate-dependent (Fe/2OG) oxygenases catalyze an array of challenging transformations via a common iron(IV)-oxo (ferryl) intermediate, which in most cases abstracts hydrogen (H•) from an aliphatic carbon of the substrate. Although it has been shown that the relative disposition of the Fe-O and C-H bonds can control the rate of H• abstraction and fate of the resultant substrate radical, there remains a paucity of structural information on the actual ferryl states, owing to their high reactivity. We demonstrate here that the stable vanadyl ion [(VIV-oxo)2+] binds along with 2OG or its decarboxylation product, succinate, in the active site of two different Fe/2OG enzymes to faithfully mimic their transient ferryl states. Both ferryl and vanadyl complexes of the Fe/2OG halogenase, SyrB2, remain stably bound to its carrier protein substrate (l-aminoacyl-S-SyrB1), whereas the corresponding complexes harboring transition metals (Fe, Mn) in lower oxidation states dissociate. In the well-studied taurine:2OG dioxygenase (TauD), the disposition of the substrate C-H bond relative to the vanadyl ion defined by pulse electron paramagnetic resonance methods is consistent with the crystal structure of the reactant complex and computational models of the ferryl state. Vanadyl substitution may thus afford access to structural details of the key ferryl intermediates in this important enzyme class.

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Year:  2017        PMID: 28960972      PMCID: PMC5840864          DOI: 10.1021/acs.inorgchem.7b02113

Source DB:  PubMed          Journal:  Inorg Chem        ISSN: 0020-1669            Impact factor:   5.165


  55 in total

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2.  Ferromagnetic exchange coupling of vanadium(IV) dpi spins across pyrimidine rings: dinuclear complexes of oxovanadium(IV) bis(1,1,1,5,5,5-hexafluoropentane-2,4-dionate) bridged by pyrimidine derivatives.

Authors:  T Ishida; S I Mitsubori; T Nogami; N Takeda; M Ishikawa; H Iwamura
Journal:  Inorg Chem       Date:  2001-12-31       Impact factor: 5.165

3.  Generation of a stable, aminotyrosyl radical-induced α2β2 complex of Escherichia coli class Ia ribonucleotide reductase.

Authors:  Ellen C Minnihan; Nozomi Ando; Edward J Brignole; Lisa Olshansky; Johnathan Chittuluru; Francisco J Asturias; Catherine L Drennan; Daniel G Nocera; Joanne Stubbe
Journal:  Proc Natl Acad Sci U S A       Date:  2013-02-19       Impact factor: 11.205

4.  Targeting of HIF-alpha to the von Hippel-Lindau ubiquitylation complex by O2-regulated prolyl hydroxylation.

Authors:  P Jaakkola; D R Mole; Y M Tian; M I Wilson; J Gielbert; S J Gaskell; A von Kriegsheim; H F Hebestreit; M Mukherji; C J Schofield; P H Maxwell; C W Pugh; P J Ratcliffe
Journal:  Science       Date:  2001-04-05       Impact factor: 47.728

5.  X-ray crystal structure of Escherichia coli taurine/alpha-ketoglutarate dioxygenase complexed to ferrous iron and substrates.

Authors:  Jonathan M Elkins; Matthew J Ryle; Ian J Clifton; Julie C Dunning Hotopp; John S Lloyd; Nicolai I Burzlaff; Jack E Baldwin; Robert P Hausinger; Peter L Roach
Journal:  Biochemistry       Date:  2002-04-23       Impact factor: 3.162

6.  Substrate positioning controls the partition between halogenation and hydroxylation in the aliphatic halogenase, SyrB2.

Authors:  Megan L Matthews; Christopher S Neumann; Linde A Miles; Tyler L Grove; Squire J Booker; Carsten Krebs; Christopher T Walsh; J Martin Bollinger
Journal:  Proc Natl Acad Sci U S A       Date:  2009-10-06       Impact factor: 11.205

7.  Electronic Structure of the Ferryl Intermediate in the α-Ketoglutarate Dependent Non-Heme Iron Halogenase SyrB2: Contributions to H Atom Abstraction Reactivity.

Authors:  Martin Srnec; Shaun D Wong; Megan L Matthews; Carsten Krebs; J Martin Bollinger; Edward I Solomon
Journal:  J Am Chem Soc       Date:  2016-04-12       Impact factor: 15.419

8.  Measuring the orientation of taurine in the active site of the non-heme Fe(II)/α-ketoglutarate-dependent taurine hydroxylase (TauD) using electron spin echo envelope modulation (ESEEM) spectroscopy.

Authors:  Thomas M Casey; Piotr K Grzyska; Robert P Hausinger; John McCracken
Journal:  J Phys Chem B       Date:  2013-08-29       Impact factor: 2.991

9.  Substrate-triggered formation and remarkable stability of the C-H bond-cleaving chloroferryl intermediate in the aliphatic halogenase, SyrB2.

Authors:  Megan L Matthews; Courtney M Krest; Eric W Barr; Frédéric H Vaillancourt; Christopher T Walsh; Michael T Green; Carsten Krebs; J Martin Bollinger
Journal:  Biochemistry       Date:  2009-05-26       Impact factor: 3.162

10.  Experimental and theoretical correlations between vanadium K-edge X-ray absorption and Kβ emission spectra.

Authors:  Julian A Rees; Aleksandra Wandzilak; Dimitrios Maganas; Nicole I C Wurster; Stefan Hugenbruch; Joanna K Kowalska; Christopher J Pollock; Frederico A Lima; Kenneth D Finkelstein; Serena DeBeer
Journal:  J Biol Inorg Chem       Date:  2016-06-01       Impact factor: 3.358

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  5 in total

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Authors:  Noah P Dunham; Wei-Chen Chang; Andrew J Mitchell; Ryan J Martinie; Bo Zhang; Jonathan A Bergman; Lauren J Rajakovich; Bo Wang; Alexey Silakov; Carsten Krebs; Amie K Boal; J Martin Bollinger
Journal:  J Am Chem Soc       Date:  2018-06-04       Impact factor: 15.419

2.  Molecular basis for enantioselective herbicide degradation imparted by aryloxyalkanoate dioxygenases in transgenic plants.

Authors:  Jonathan R Chekan; Chayanid Ongpipattanakul; Terry R Wright; Bo Zhang; J Martin Bollinger; Lauren J Rajakovich; Carsten Krebs; Robert M Cicchillo; Satish K Nair
Journal:  Proc Natl Acad Sci U S A       Date:  2019-06-17       Impact factor: 11.205

3.  1H-HYSCORE Reveals Structural Details at the Fe(II) Active Site of Taurine:2-Oxoglutarate Dioxygenase.

Authors:  John McCracken; Thomas M Casey; Robert P Hausinger
Journal:  Appl Magn Reson       Date:  2020-10-28       Impact factor: 0.974

4.  Structure of a Ferryl Mimic in the Archetypal Iron(II)- and 2-(Oxo)-glutarate-Dependent Dioxygenase, TauD.

Authors:  Katherine M Davis; Madison Altmyer; Ryan J Martinie; Irene Schaperdoth; Carsten Krebs; J Martin Bollinger; Amie K Boal
Journal:  Biochemistry       Date:  2019-10-02       Impact factor: 3.162

5.  Nuclear Resonance Vibrational Spectroscopic Definition of the Facial Triad FeIV═O Intermediate in Taurine Dioxygenase: Evaluation of Structural Contributions to Hydrogen Atom Abstraction.

Authors:  Martin Srnec; Shyam R Iyer; Laura M K Dassama; Kiyoung Park; Shaun D Wong; Kyle D Sutherlin; Yoshitaka Yoda; Yasuhiro Kobayashi; Masayuki Kurokuzu; Makina Saito; Makoto Seto; Carsten Krebs; J Martin Bollinger; Edward I Solomon
Journal:  J Am Chem Soc       Date:  2020-10-26       Impact factor: 15.419

  5 in total

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