Literature DB >> 28960553

From chaperonins to Rubisco assembly and metabolic repair.

Manajit Hayer-Hartl1.   

Abstract

Ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) mediates the fixation of atmospheric CO2 in photosynthesis by catalyzing the carboxylation of the 5-carbon sugar ribulose-1,5-bisphosphate (RuBP). Despite its pivotal role, Rubisco is an inefficient enzyme and thus has been a key target for bioengineering. However, efforts to increase crop yields by Rubisco engineering remain unsuccessful, due in part to the complex machinery of molecular chaperones required for Rubisco biogenesis and metabolic repair. While the large subunit of Rubisco generally requires the chaperonin system for folding, the evolution of the hexadecameric Rubisco from its dimeric precursor resulted in the dependence on an array of additional factors required for assembly. Moreover, Rubisco function can be inhibited by a range of sugar-phosphate ligands. Metabolic repair of Rubisco depends on remodeling by the ATP-dependent Rubisco activase and hydrolysis of inhibitors by specific phosphatases. This review highlights our work toward understanding the structure and mechanism of these auxiliary machineries.
© 2017 The Protein Society.

Entities:  

Keywords:  Dorothy Crowfoot Hodgkin; Rubisco; Rubisco activase; assembly; chaperonin; metabolic repair; molecular chaperones; phosphatase; protein folding

Mesh:

Substances:

Year:  2017        PMID: 28960553      PMCID: PMC5699486          DOI: 10.1002/pro.3309

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  59 in total

1.  Advancing our understanding and capacity to engineer nature's CO2-sequestering enzyme, Rubisco.

Authors:  Spencer M Whitney; Robert L Houtz; Hernan Alonso
Journal:  Plant Physiol       Date:  2010-10-25       Impact factor: 8.340

Review 2.  The GroEL-GroES Chaperonin Machine: A Nano-Cage for Protein Folding.

Authors:  Manajit Hayer-Hartl; Andreas Bracher; F Ulrich Hartl
Journal:  Trends Biochem Sci       Date:  2015-09-25       Impact factor: 13.807

3.  Protein folding in mitochondria requires complex formation with hsp60 and ATP hydrolysis.

Authors:  J Ostermann; A L Horwich; W Neupert; F U Hartl
Journal:  Nature       Date:  1989-09-14       Impact factor: 49.962

Review 4.  Regulation of Rubisco activase and its interaction with Rubisco.

Authors:  Archie R Portis; Cishan Li; Dafu Wang; Michael E Salvucci
Journal:  J Exp Bot       Date:  2007-11-29       Impact factor: 6.992

5.  Degradation of potent Rubisco inhibitor by selective sugar phosphatase.

Authors:  Andreas Bracher; Anurag Sharma; Amanda Starling-Windhof; F Ulrich Hartl; Manajit Hayer-Hartl
Journal:  Nat Plants       Date:  2015-01-08       Impact factor: 15.793

6.  Homologous plant and bacterial proteins chaperone oligomeric protein assembly.

Authors:  S M Hemmingsen; C Woolford; S M van der Vies; K Tilly; D T Dennis; C P Georgopoulos; R W Hendrix; R J Ellis
Journal:  Nature       Date:  1988-05-26       Impact factor: 49.962

7.  Catalytic by-product formation and ligand binding by ribulose bisphosphate carboxylases from different phylogenies.

Authors:  F Grant Pearce
Journal:  Biochem J       Date:  2006-11-01       Impact factor: 3.857

Review 8.  Structure and function of Rubisco.

Authors:  Inger Andersson; Anders Backlund
Journal:  Plant Physiol Biochem       Date:  2008-01-12       Impact factor: 4.270

9.  Structural mechanism of RuBisCO activation by carbamylation of the active site lysine.

Authors:  Boguslaw Stec
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-29       Impact factor: 11.205

10.  Structural Characterization of a Newly Identified Component of α-Carboxysomes: The AAA+ Domain Protein CsoCbbQ.

Authors:  Markus Sutter; Evan W Roberts; Raul C Gonzalez; Cassandra Bates; Salma Dawoud; Kimberly Landry; Gordon C Cannon; Sabine Heinhorst; Cheryl A Kerfeld
Journal:  Sci Rep       Date:  2015-11-05       Impact factor: 4.379

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  8 in total

1.  The small RbcS-like domains of the β-carboxysome structural protein CcmM bind RubisCO at a site distinct from that binding the RbcS subunit.

Authors:  Patrick Ryan; Taylor J B Forrester; Charles Wroblewski; Tristan M G Kenney; Elena N Kitova; John S Klassen; Matthew S Kimber
Journal:  J Biol Chem       Date:  2018-12-27       Impact factor: 5.157

2.  Novel bacterial clade reveals origin of form I Rubisco.

Authors:  Jose H Pereira; Albert K Liu; Douglas M Banda; Douglas J Orr; Michal Hammel; Christine He; Martin A J Parry; Elizabete Carmo-Silva; Paul D Adams; Jillian F Banfield; Patrick M Shih
Journal:  Nat Plants       Date:  2020-08-31       Impact factor: 15.793

3.  Molecular basis for the assembly of RuBisCO assisted by the chaperone Raf1.

Authors:  Ling-Yun Xia; Yong-Liang Jiang; Wen-Wen Kong; Hui Sun; Wei-Fang Li; Yuxing Chen; Cong-Zhao Zhou
Journal:  Nat Plants       Date:  2020-05-25       Impact factor: 15.793

4.  Removal of redox-sensitive Rubisco Activase does not alter Rubisco regulation in soybean.

Authors:  Christopher M Harvey; Amanda P Cavanagh; Sang Yeol Kim; David A Wright; Ron G Edquilang; Kayla S Shreeves; Juan Alejandro Perdomo; Martin H Spalding; Donald R Ort; Carl J Bernacchi; Steven C Huber
Journal:  Photosynth Res       Date:  2022-09-27       Impact factor: 3.429

Review 5.  Insights into Fluctuations of Structure of Proteins: Significance of Intermediary States in Regulating Biological Functions.

Authors:  Zahoor Ahmad Parray; Mohammad Shahid; Asimul Islam
Journal:  Polymers (Basel)       Date:  2022-04-11       Impact factor: 4.967

6.  Assembly-disassembly is coupled to the ATPase cycle of tobacco Rubisco activase.

Authors:  Andrew J Serban; Isabella L Breen; Hoang Q Bui; Marcia Levitus; Rebekka M Wachter
Journal:  J Biol Chem       Date:  2018-10-23       Impact factor: 5.157

7.  Roles of RbcX in Carboxysome Biosynthesis in the Cyanobacterium Synechococcus elongatus PCC7942.

Authors:  Fang Huang; Olga Vasieva; Yaqi Sun; Matthew Faulkner; Gregory F Dykes; Ziyu Zhao; Lu-Ning Liu
Journal:  Plant Physiol       Date:  2018-11-02       Impact factor: 8.340

8.  A Long-Day Photoperiod and 6-Benzyladenine Promote Runner Formation through Upregulation of Soluble Sugar Content in Strawberry.

Authors:  Yali Li; Jiangtao Hu; Hao Wei; Byoung Ryong Jeong
Journal:  Int J Mol Sci       Date:  2020-07-12       Impact factor: 5.923

  8 in total

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