Literature DB >> 18294858

Structure and function of Rubisco.

Inger Andersson1, Anders Backlund.   

Abstract

Ribulose-1,5-bisphosphate carboxylase/oxygenase (Rubisco) is the major enzyme assimilating CO(2) into the biosphere. At the same time Rubisco is an extremely inefficient catalyst and its carboxylase activity is compromised by an opposing oxygenase activity involving atmospheric O(2). The shortcomings of Rubisco have implications for crop yield, nitrogen and water usage, and for the global carbon cycle. Numerous high-resolution crystal structures of different forms of Rubisco are now available, including structures of mutant enzymes. This review uses the information provided in these structures in a structure-based sequence alignment and discusses Rubisco function in the context of structural variations at all levels--amino acid sequence, fold, tertiary and quaternary structure--with an evolutionary perspective and an emphasis on the structural features of the enzyme that may determine its function as a carboxylase.

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Year:  2008        PMID: 18294858     DOI: 10.1016/j.plaphy.2008.01.001

Source DB:  PubMed          Journal:  Plant Physiol Biochem        ISSN: 0981-9428            Impact factor:   4.270


  122 in total

1.  Advancing our understanding and capacity to engineer nature's CO2-sequestering enzyme, Rubisco.

Authors:  Spencer M Whitney; Robert L Houtz; Hernan Alonso
Journal:  Plant Physiol       Date:  2010-10-25       Impact factor: 8.340

2.  Structure-based catalytic optimization of a type III Rubisco from a hyperthermophile.

Authors:  Yuichi Nishitani; Shosuke Yoshida; Masahiro Fujihashi; Kazuya Kitagawa; Takashi Doi; Haruyuki Atomi; Tadayuki Imanaka; Kunio Miki
Journal:  J Biol Chem       Date:  2010-10-06       Impact factor: 5.157

3.  NanoESI mass spectrometry of Rubisco and Rubisco activase structures and their interactions with nucleotides and sugar phosphates.

Authors:  Michelle J Blayney; Spencer M Whitney; Jennifer L Beck
Journal:  J Am Soc Mass Spectrom       Date:  2011-06-29       Impact factor: 3.109

4.  Structure and mechanism of the Rubisco-assembly chaperone Raf1.

Authors:  Thomas Hauser; Javaid Y Bhat; Goran Miličić; Petra Wendler; F Ulrich Hartl; Andreas Bracher; Manajit Hayer-Hartl
Journal:  Nat Struct Mol Biol       Date:  2015-08-03       Impact factor: 15.369

5.  Crystallization and preliminary X-ray analysis of 2,3-diketo-5-methylthiopentyl-1-phosphate enolase from Bacillus subtilis.

Authors:  Haruka Tamura; Hiroki Ashida; Shogo Koga; Yohtaro Saito; Tomonori Yadani; Yasushi Kai; Tsuyoshi Inoue; Akiho Yokota; Hiroyoshi Matsumura
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2009-01-31

6.  Rubisco in complex with Rubisco large subunit methyltransferase.

Authors:  Stefan Raunser; Roberta Magnani; Zhong Huang; Robert L Houtz; Raymond C Trievel; Pawel A Penczek; Thomas Walz
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-10       Impact factor: 11.205

Review 7.  Frontiers, opportunities, and challenges in biochemical and chemical catalysis of CO2 fixation.

Authors:  Aaron M Appel; John E Bercaw; Andrew B Bocarsly; Holger Dobbek; Daniel L DuBois; Michel Dupuis; James G Ferry; Etsuko Fujita; Russ Hille; Paul J A Kenis; Cheryl A Kerfeld; Robert H Morris; Charles H F Peden; Archie R Portis; Stephen W Ragsdale; Thomas B Rauchfuss; Joost N H Reek; Lance C Seefeldt; Rudolf K Thauer; Grover L Waldrop
Journal:  Chem Rev       Date:  2013-06-14       Impact factor: 60.622

8.  Quantum chemical modeling of the kinetic isotope effect of the carboxylation step in RuBisCO.

Authors:  Jan Philipp Götze; Peter Saalfrank
Journal:  J Mol Model       Date:  2011-08-25       Impact factor: 1.810

9.  Substrate-induced assembly of Methanococcoides burtonii D-ribulose-1,5-bisphosphate carboxylase/oxygenase dimers into decamers.

Authors:  Hernán Alonso; Michelle J Blayney; Jennifer L Beck; Spencer M Whitney
Journal:  J Biol Chem       Date:  2009-10-16       Impact factor: 5.157

10.  Activation of interspecies-hybrid Rubisco enzymes to assess different models for the Rubisco-Rubisco activase interaction.

Authors:  Rebekka M Wachter; Michael E Salvucci; A Elizabete Carmo-Silva; Csengele Barta; Todor Genkov; Robert J Spreitzer
Journal:  Photosynth Res       Date:  2013-04-24       Impact factor: 3.573

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