Literature DB >> 28906107

Concepts and Methods of Solid-State NMR Spectroscopy Applied to Biomembranes.

Trivikram R Molugu1, Soohyun Lee1, Michael F Brown1.   

Abstract

Concepts of solid-state NMR spectroscopy and applications to fluid membranes are reviewed in this paper. Membrane lipids with 2H-labeled acyl chains or polar head groups are studied using 2H NMR to yield knowledge of their atomistic structures in relation to equilibrium properties. This review demonstrates the principles and applications of solid-state NMR by unifying dipolar and quadrupolar interactions and highlights the unique features offered by solid-state 2H NMR with experimental illustrations. For randomly oriented multilamellar lipids or aligned membranes, solid-state 2H NMR enables direct measurement of residual quadrupolar couplings (RQCs) due to individual C-2H-labeled segments. The distribution of RQC values gives nearly complete profiles of the segmental order parameters SCD(i) as a function of acyl segment position (i). Alternatively, one can measure residual dipolar couplings (RDCs) for natural abundance lipid samples to obtain segmental SCH order parameters. A theoretical mean-torque model provides acyl-packing profiles representing the cumulative chain extension along the normal to the aqueous interface. Equilibrium structural properties of fluid bilayers and various thermodynamic quantities can then be calculated, which describe the interactions with cholesterol, detergents, peptides, and integral membrane proteins and formation of lipid rafts. One can also obtain direct information for membrane-bound peptides or proteins by measuring RDCs using magic-angle spinning (MAS) in combination with dipolar recoupling methods. Solid-state NMR methods have been extensively applied to characterize model membranes and membrane-bound peptides and proteins, giving unique information on their conformations, orientations, and interactions in the natural liquid-crystalline state.

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Year:  2017        PMID: 28906107     DOI: 10.1021/acs.chemrev.6b00619

Source DB:  PubMed          Journal:  Chem Rev        ISSN: 0009-2665            Impact factor:   60.622


  24 in total

1.  Nicotinamide phosphoribosyltransferase purification using SUMO expression system.

Authors:  Trivikram R Molugu; Radu C Oita; Udeep Chawla; Sara M Camp; Michael F Brown; Joe G N Garcia
Journal:  Anal Biochem       Date:  2020-01-23       Impact factor: 3.365

2.  Solid-state NMR reveals a comprehensive view of the dynamics of the flexible, disordered N-terminal domain of amyloid-β fibrils.

Authors:  Dan Fai Au; Dmitry Ostrovsky; Riqiang Fu; Liliya Vugmeyster
Journal:  J Biol Chem       Date:  2019-02-08       Impact factor: 5.157

Review 3.  Use of paramagnetic systems to speed-up NMR data acquisition and for structural and dynamic studies.

Authors:  Vojč Kocman; Giacomo M Di Mauro; Gianluigi Veglia; Ayyalusamy Ramamoorthy
Journal:  Solid State Nucl Magn Reson       Date:  2019-07-12       Impact factor: 2.293

4.  Supramolecular Organization of Apolipoprotein-A-I-Derived Peptides within Disc-like Arrangements.

Authors:  Evgeniy S Salnikov; G M Anantharamaiah; Burkhard Bechinger
Journal:  Biophys J       Date:  2018-07-11       Impact factor: 4.033

5.  Solid phase synthesis and spectroscopic characterization of the active and inactive forms of bacteriophage S21 pinholin protein.

Authors:  Daniel L Drew; Tanbir Ahammad; Rachel A Serafin; Brandon J Butcher; Katherine R Clowes; Zachary Drake; Indra D Sahu; Robert M McCarrick; Gary A Lorigan
Journal:  Anal Biochem       Date:  2018-12-04       Impact factor: 3.365

6.  Application of 2D IR Bioimaging: Hyperspectral Images of Formalin-Fixed Pancreatic Tissues and Observation of Slow Protein Degradation.

Authors:  Sidney S Dicke; Ariel M Alperstein; Kathryn L Schueler; Donald S Stapleton; Shane P Simonett; Caitlyn R Fields; Farzaneh Chalyavi; Mark P Keller; Alan D Attie; Martin T Zanni
Journal:  J Phys Chem B       Date:  2021-08-15       Impact factor: 2.991

7.  Active S2168 and inactive S21IRS pinholin interact differently with the lipid bilayer: A 31P and 2H solid state NMR study.

Authors:  Daniel L Drew; Brandon Butcher; Indra D Sahu; Tanbir Ahammad; Gunjan Dixit; Gary A Lorigan
Journal:  Biochim Biophys Acta Biomembr       Date:  2020-03-05       Impact factor: 3.747

8.  How cholesterol stiffens unsaturated lipid membranes.

Authors:  Saptarshi Chakraborty; Milka Doktorova; Trivikram R Molugu; Frederick A Heberle; Haden L Scott; Boris Dzikovski; Michihiro Nagao; Laura-Roxana Stingaciu; Robert F Standaert; Francisco N Barrera; John Katsaras; George Khelashvili; Michael F Brown; Rana Ashkar
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-25       Impact factor: 11.205

Review 9.  Advances in instrumentation and methodology for solid-state NMR of biological assemblies.

Authors:  Rachel W Martin; John E Kelly; Jessica I Kelz
Journal:  J Struct Biol       Date:  2018-09-08       Impact factor: 2.867

Review 10.  Recent developments in deuterium solid-state NMR for the detection of slow motions in proteins.

Authors:  Liliya Vugmeyster
Journal:  Solid State Nucl Magn Reson       Date:  2021-01-07       Impact factor: 2.293

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