Literature DB >> 28892062

Genome-wide association study identifies 112 new loci for body mass index in the Japanese population.

Masato Akiyama1, Yukinori Okada1,2,3, Masahiro Kanai1, Atsushi Takahashi1,4, Yukihide Momozawa5, Masashi Ikeda6, Nakao Iwata6, Shiro Ikegawa7, Makoto Hirata8, Koichi Matsuda9, Motoki Iwasaki10, Taiki Yamaji10, Norie Sawada10, Tsuyoshi Hachiya11, Kozo Tanno11,12, Atsushi Shimizu11, Atsushi Hozawa13,14, Naoko Minegishi13,14, Shoichiro Tsugane15, Masayuki Yamamoto13,14, Michiaki Kubo16, Yoichiro Kamatani1,17.   

Abstract

Obesity is a risk factor for a wide variety of health problems. In a genome-wide association study (GWAS) of body mass index (BMI) in Japanese people (n = 173,430), we found 85 loci significantly associated with obesity (P < 5.0 × 10-8), of which 51 were previously unknown. We conducted trans-ancestral meta-analyses by integrating these results with the results from a GWAS of Europeans and identified 61 additional new loci. In total, this study identifies 112 novel loci, doubling the number of previously known BMI-associated loci. By annotating associated variants with cell-type-specific regulatory marks, we found enrichment of variants in CD19+ cells. We also found significant genetic correlations between BMI and lymphocyte count (P = 6.46 × 10-5, rg = 0.18) and between BMI and multiple complex diseases. These findings provide genetic evidence that lymphocytes are relevant to body weight regulation and offer insights into the pathogenesis of obesity.

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Year:  2017        PMID: 28892062     DOI: 10.1038/ng.3951

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  54 in total

1.  The evolution and population genetics of the ALDH2 locus: random genetic drift, selection, and low levels of recombination.

Authors:  Hiroki Oota; Andrew J Pakstis; Batsheva Bonne-Tamir; David Goldman; Elena Grigorenko; Sylvester L B Kajuna; Nganyirwa J Karoma; Selemani Kungulilo; Ru-Band Lu; Kunle Odunsi; Friday Okonofua; Olga V Zhukova; Judith R Kidd; Kenneth K Kidd
Journal:  Ann Hum Genet       Date:  2004-03       Impact factor: 1.670

2.  Principal components analysis corrects for stratification in genome-wide association studies.

Authors:  Alkes L Price; Nick J Patterson; Robert M Plenge; Michael E Weinblatt; Nancy A Shadick; David Reich
Journal:  Nat Genet       Date:  2006-07-23       Impact factor: 38.330

Review 3.  The BioBank Japan Project.

Authors:  Yusuke Nakamura
Journal:  Clin Adv Hematol Oncol       Date:  2007-09

4.  Association between the human immune response and body mass index.

Authors:  Silvia Ilavská; Mira Horváthová; Michaela Szabová; Tomáš Nemessányi; Eva Jahnová; Jana Tulinská; Aurélia Líšková; Ladislava Wsolová; Marta Staruchová; Katarína Volkovová
Journal:  Hum Immunol       Date:  2012-03-06       Impact factor: 2.850

5.  Meta-analysis of genome-wide association studies in East Asian-ancestry populations identifies four new loci for body mass index.

Authors:  Wanqing Wen; Wei Zheng; Yukinori Okada; Fumihiko Takeuchi; Yasuharu Tabara; Joo-Yeon Hwang; Rajkumar Dorajoo; Huaixing Li; Fuu-Jen Tsai; Xiaobo Yang; Jiang He; Ying Wu; Meian He; Yi Zhang; Jun Liang; Xiuqing Guo; Wayne Huey-Herng Sheu; Ryan Delahanty; Xingyi Guo; Michiaki Kubo; Ken Yamamoto; Takayoshi Ohkubo; Min Jin Go; Jian Jun Liu; Wei Gan; Ching-Chu Chen; Yong Gao; Shengxu Li; Nanette R Lee; Chen Wu; Xueya Zhou; Huaidong Song; Jie Yao; I-Te Lee; Jirong Long; Tatsuhiko Tsunoda; Koichi Akiyama; Naoyuki Takashima; Yoon Shin Cho; Rick Th Ong; Ling Lu; Chien-Hsiun Chen; Aihua Tan; Treva K Rice; Linda S Adair; Lixuan Gui; Matthew Allison; Wen-Jane Lee; Qiuyin Cai; Minoru Isomura; Satoshi Umemura; Young Jin Kim; Mark Seielstad; James Hixson; Yong-Bing Xiang; Masato Isono; Bong-Jo Kim; Xueling Sim; Wei Lu; Toru Nabika; Juyoung Lee; Wei-Yen Lim; Yu-Tang Gao; Ryoichi Takayanagi; Dae-Hee Kang; Tien Yin Wong; Chao Agnes Hsiung; I-Chien Wu; Jyh-Ming Jimmy Juang; Jiajun Shi; Bo Youl Choi; Tin Aung; Frank Hu; Mi Kyung Kim; Wei Yen Lim; Tzung-Dao Wang; Min-Ho Shin; Jeannette Lee; Bu-Tian Ji; Young-Hoon Lee; Terri L Young; Dong Hoon Shin; Byung-Yeol Chun; Myeong-Chan Cho; Bok-Ghee Han; Chii-Min Hwu; Themistocles L Assimes; Devin Absher; Xiaofei Yan; Eric Kim; Jane Z Kuo; Soonil Kwon; Kent D Taylor; Yii-Der I Chen; Jerome I Rotter; Lu Qi; Dingliang Zhu; Tangchun Wu; Karen L Mohlke; Dongfeng Gu; Zengnan Mo; Jer-Yuarn Wu; Xu Lin; Tetsuro Miki; E Shyong Tai; Jong-Young Lee; Norihiro Kato; Xiao-Ou Shu; Toshihiro Tanaka
Journal:  Hum Mol Genet       Date:  2014-05-26       Impact factor: 6.150

6.  Gigantism and acromegaly due to Xq26 microduplications and GPR101 mutation.

Authors:  Giampaolo Trivellin; Adrian F Daly; Fabio R Faucz; Bo Yuan; Liliya Rostomyan; Darwin O Larco; Marie Helene Schernthaner-Reiter; Eva Szarek; Letícia F Leal; Jean-Hubert Caberg; Emilie Castermans; Chiara Villa; Aggeliki Dimopoulos; Prashant Chittiboina; Paraskevi Xekouki; Nalini Shah; Daniel Metzger; Philippe A Lysy; Emanuele Ferrante; Natalia Strebkova; Nadia Mazerkina; Maria Chiara Zatelli; Maya Lodish; Anelia Horvath; Rodrigo Bertollo de Alexandre; Allison D Manning; Isaac Levy; Margaret F Keil; Maria de la Luz Sierra; Leonor Palmeira; Wouter Coppieters; Michel Georges; Luciana A Naves; Mauricette Jamar; Vincent Bours; T John Wu; Catherine S Choong; Jerome Bertherat; Philippe Chanson; Peter Kamenický; William E Farrell; Anne Barlier; Martha Quezado; Ivana Bjelobaba; Stanko S Stojilkovic; Jurgen Wess; Stefano Costanzi; Pengfei Liu; James R Lupski; Albert Beckers; Constantine A Stratakis
Journal:  N Engl J Med       Date:  2014-12-03       Impact factor: 91.245

7.  FTO Obesity Variant Circuitry and Adipocyte Browning in Humans.

Authors:  Melina Claussnitzer; Simon N Dankel; Kyoung-Han Kim; Gerald Quon; Wouter Meuleman; Christine Haugen; Viktoria Glunk; Isabel S Sousa; Jacqueline L Beaudry; Vijitha Puviindran; Nezar A Abdennur; Jannel Liu; Per-Arne Svensson; Yi-Hsiang Hsu; Daniel J Drucker; Gunnar Mellgren; Chi-Chung Hui; Hans Hauner; Manolis Kellis
Journal:  N Engl J Med       Date:  2015-08-19       Impact factor: 91.245

8.  In prehypertension leukocytosis is associated with body mass index but not with blood pressure or incident hypertension.

Authors:  Stevo Julius; Brent M Egan; Niko A Kaciroti; Shawna D Nesbitt; Andrew K Chen
Journal:  J Hypertens       Date:  2014-02       Impact factor: 4.844

Review 9.  Overview of the BioBank Japan Project: Study design and profile.

Authors:  Akiko Nagai; Makoto Hirata; Yoichiro Kamatani; Kaori Muto; Koichi Matsuda; Yutaka Kiyohara; Toshiharu Ninomiya; Akiko Tamakoshi; Zentaro Yamagata; Taisei Mushiroda; Yoshinori Murakami; Koichiro Yuji; Yoichi Furukawa; Hitoshi Zembutsu; Toshihiro Tanaka; Yozo Ohnishi; Yusuke Nakamura; Michiaki Kubo
Journal:  J Epidemiol       Date:  2017-02-08       Impact factor: 3.211

10.  Integrative analysis of 111 reference human epigenomes.

Authors:  Anshul Kundaje; Wouter Meuleman; Jason Ernst; Misha Bilenky; Angela Yen; Alireza Heravi-Moussavi; Pouya Kheradpour; Zhizhuo Zhang; Jianrong Wang; Michael J Ziller; Viren Amin; John W Whitaker; Matthew D Schultz; Lucas D Ward; Abhishek Sarkar; Gerald Quon; Richard S Sandstrom; Matthew L Eaton; Yi-Chieh Wu; Andreas R Pfenning; Xinchen Wang; Melina Claussnitzer; Yaping Liu; Cristian Coarfa; R Alan Harris; Noam Shoresh; Charles B Epstein; Elizabeta Gjoneska; Danny Leung; Wei Xie; R David Hawkins; Ryan Lister; Chibo Hong; Philippe Gascard; Andrew J Mungall; Richard Moore; Eric Chuah; Angela Tam; Theresa K Canfield; R Scott Hansen; Rajinder Kaul; Peter J Sabo; Mukul S Bansal; Annaick Carles; Jesse R Dixon; Kai-How Farh; Soheil Feizi; Rosa Karlic; Ah-Ram Kim; Ashwinikumar Kulkarni; Daofeng Li; Rebecca Lowdon; GiNell Elliott; Tim R Mercer; Shane J Neph; Vitor Onuchic; Paz Polak; Nisha Rajagopal; Pradipta Ray; Richard C Sallari; Kyle T Siebenthall; Nicholas A Sinnott-Armstrong; Michael Stevens; Robert E Thurman; Jie Wu; Bo Zhang; Xin Zhou; Arthur E Beaudet; Laurie A Boyer; Philip L De Jager; Peggy J Farnham; Susan J Fisher; David Haussler; Steven J M Jones; Wei Li; Marco A Marra; Michael T McManus; Shamil Sunyaev; James A Thomson; Thea D Tlsty; Li-Huei Tsai; Wei Wang; Robert A Waterland; Michael Q Zhang; Lisa H Chadwick; Bradley E Bernstein; Joseph F Costello; Joseph R Ecker; Martin Hirst; Alexander Meissner; Aleksandar Milosavljevic; Bing Ren; John A Stamatoyannopoulos; Ting Wang; Manolis Kellis
Journal:  Nature       Date:  2015-02-19       Impact factor: 69.504

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  143 in total

Review 1.  Impact of Genes and Environment on Obesity and Cardiovascular Disease.

Authors:  Yoriko Heianza; Lu Qi
Journal:  Endocrinology       Date:  2019-01-01       Impact factor: 4.736

2.  Maternal BMI-Increasing Genetic Risk Score and Fetal Weights among Diverse US Ethnic Groups.

Authors:  Deepika Shrestha; Mohammad L Rahman; Stefanie N Hinkle; Tsegaselassie Workalemahu; Fasil Tekola-Ayele
Journal:  Obesity (Silver Spring)       Date:  2019-07       Impact factor: 5.002

3.  Prospective analyses of white adipose tissue gene expression in relation to long-term body weight changes.

Authors:  Kelvin H M Kwok; Mikael Rydén; Daniel P Andersson; Gallic Beauchef; Christelle Guere; Katell Vie; Otto Bergman; Veroniqa Lundbäck; Peter Arner; Ingrid Dahlman
Journal:  Int J Obes (Lond)       Date:  2019-06-04       Impact factor: 5.095

4.  A genome-wide association study of bitter and sweet beverage consumption.

Authors:  Victor W Zhong; Alan Kuang; Rebecca D Danning; Peter Kraft; Rob M van Dam; Daniel I Chasman; Marilyn C Cornelis
Journal:  Hum Mol Genet       Date:  2019-07-15       Impact factor: 6.150

Review 5.  Progress in Defining the Genetic Contribution to Type 2 Diabetes in Individuals of East Asian Ancestry.

Authors:  Cassandra N Spracklen; Xueling Sim
Journal:  Curr Diab Rep       Date:  2021-04-13       Impact factor: 4.810

6.  A Large Multiethnic Genome-Wide Association Study of Adult Body Mass Index Identifies Novel Loci.

Authors:  Thomas J Hoffmann; Hélène Choquet; Jie Yin; Yambazi Banda; Mark N Kvale; Maria Glymour; Catherine Schaefer; Neil Risch; Eric Jorgenson
Journal:  Genetics       Date:  2018-08-14       Impact factor: 4.562

Review 7.  Genetic and Genomic Advances in Developmental Models: Applications for Nutrition Research.

Authors:  Winyoo Chowanadisai; Matthew D Hart; Morgan D Strong; David M Graham; Robert B Rucker; Brenda J Smith; Carl L Keen; Mark A Messerli
Journal:  Adv Nutr       Date:  2020-07-01       Impact factor: 8.701

Review 8.  Clinical use of current polygenic risk scores may exacerbate health disparities.

Authors:  Alicia R Martin; Masahiro Kanai; Yoichiro Kamatani; Yukinori Okada; Benjamin M Neale; Mark J Daly
Journal:  Nat Genet       Date:  2019-03-29       Impact factor: 38.330

Review 9.  Genes that make you fat, but keep you healthy.

Authors:  R J F Loos; T O Kilpeläinen
Journal:  J Intern Med       Date:  2018-10-02       Impact factor: 8.989

10.  Genetic mapping of etiologic brain cell types for obesity.

Authors:  Pascal N Timshel; Jonatan J Thompson; Tune H Pers
Journal:  Elife       Date:  2020-09-21       Impact factor: 8.140

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