Literature DB >> 28836574

Translational fidelity and mistranslation in the cellular response to stress.

Kyle Mohler1, Michael Ibba1.   

Abstract

Faithful translation of mRNA into the corresponding polypeptide is a complex multistep process, requiring accurate amino acid selection, transfer RNA (tRNA) charging and mRNA decoding on the ribosome. Key players in this process are aminoacyl-tRNA synthetases (aaRSs), which not only catalyse the attachment of cognate amino acids to their respective tRNAs, but also selectively hydrolyse incorrectly activated non-cognate amino acids and/or misaminoacylated tRNAs. This aaRS proofreading provides quality control checkpoints that exclude non-cognate amino acids during translation, and in so doing helps to prevent the formation of an aberrant proteome. However, despite the intrinsic need for high accuracy during translation, and the widespread evolutionary conservation of aaRS proofreading pathways, requirements for translation quality control vary depending on cellular physiology and changes in growth conditions, and translation errors are not always detrimental. Recent work has demonstrated that mistranslation can also be beneficial to cells, and some organisms have selected for a higher degree of mistranslation than others. The aims of this Review Article are to summarize the known mechanisms of protein translational fidelity and explore the diversity and impact of mistranslation events as a potentially beneficial response to environmental and cellular stress.

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Year:  2017        PMID: 28836574      PMCID: PMC5697424          DOI: 10.1038/nmicrobiol.2017.117

Source DB:  PubMed          Journal:  Nat Microbiol        ISSN: 2058-5276            Impact factor:   17.745


  131 in total

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Authors:  Ivan Ahel; Dragana Korencic; Michael Ibba; Dieter Söll
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-08       Impact factor: 11.205

Review 2.  Evolutionary optimization of speed and accuracy of decoding on the ribosome.

Authors:  Ingo Wohlgemuth; Corinna Pohl; Joerg Mittelstaet; Andrey L Konevega; Marina V Rodnina
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2011-10-27       Impact factor: 6.237

3.  Amino acid specificity in translation.

Authors:  Taraka Dale; Olke C Uhlenbeck
Journal:  Trends Biochem Sci       Date:  2005-11-02       Impact factor: 13.807

Review 4.  Universal rules and idiosyncratic features in tRNA identity.

Authors:  R Giegé; M Sissler; C Florentz
Journal:  Nucleic Acids Res       Date:  1998-11-15       Impact factor: 16.971

5.  Real-time quantification of single RNA translation dynamics in living cells.

Authors:  Tatsuya Morisaki; Kenneth Lyon; Keith F DeLuca; Jennifer G DeLuca; Brian P English; Zhengjian Zhang; Luke D Lavis; Jonathan B Grimm; Sarada Viswanathan; Loren L Looger; Timothee Lionnet; Timothy J Stasevich
Journal:  Science       Date:  2016-05-05       Impact factor: 47.728

Review 6.  The bacterial translation stress response.

Authors:  Agata L Starosta; Jürgen Lassak; Kirsten Jung; Daniel N Wilson
Journal:  FEMS Microbiol Rev       Date:  2014-09-26       Impact factor: 16.408

7.  Probing the limits of protein-amino acid side chain recognition with the aminoacyl-tRNA synthetases. Discrimination against phenylalanine by tyrosyl-tRNA synthetases.

Authors:  A R Fersht; J S Shindler; W C Tsui
Journal:  Biochemistry       Date:  1980-11-25       Impact factor: 3.162

Review 8.  tRNA modifications regulate translation during cellular stress.

Authors:  Chen Gu; Thomas J Begley; Peter C Dedon
Journal:  FEBS Lett       Date:  2014-10-07       Impact factor: 4.124

9.  Editing of misaminoacylated tRNA controls the sensitivity of amino acid stress responses in Saccharomyces cerevisiae.

Authors:  Kyle Mohler; Rebecca Mann; Tammy J Bullwinkle; Kyle Hopkins; Lin Hwang; Noah M Reynolds; Brandon Gassaway; Hans-Rudolf Aerni; Jesse Rinehart; Michael Polymenis; Kym Faull; Michael Ibba
Journal:  Nucleic Acids Res       Date:  2017-04-20       Impact factor: 16.971

10.  Evolution of the Insertion-Deletion Mutation Rate Across the Tree of Life.

Authors:  Way Sung; Matthew S Ackerman; Marcus M Dillon; Thomas G Platt; Clay Fuqua; Vaughn S Cooper; Michael Lynch
Journal:  G3 (Bethesda)       Date:  2016-08-09       Impact factor: 3.154

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  54 in total

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Journal:  Biochem Biophys Res Commun       Date:  2018-06-05       Impact factor: 3.575

Review 2.  The Mechanisms of Substrate Selection, Catalysis, and Translocation by the Elongating RNA Polymerase.

Authors:  Georgiy A Belogurov; Irina Artsimovitch
Journal:  J Mol Biol       Date:  2019-05-31       Impact factor: 5.469

3.  Transfer RNA function and evolution.

Authors:  Patrick O'Donoghue; Jiqiang Ling; Dieter Söll
Journal:  RNA Biol       Date:  2018       Impact factor: 4.652

4.  Metabolic stress promotes stop-codon readthrough and phenotypic heterogeneity.

Authors:  Hong Zhang; Zhihui Lyu; Yongqiang Fan; Christopher R Evans; Karl W Barber; Kinshuk Banerjee; Oleg A Igoshin; Jesse Rinehart; Jiqiang Ling
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-24       Impact factor: 11.205

5.  Duplication of leucyl-tRNA synthetase in an archaeal extremophile may play a role in adaptation to variable environmental conditions.

Authors:  Christopher S Weitzel; Li Li; Changyi Zhang; Kristen K Eilts; Nicholas M Bretz; Alex L Gatten; Rachel J Whitaker; Susan A Martinis
Journal:  J Biol Chem       Date:  2020-02-26       Impact factor: 5.157

Review 6.  Aminoacyl-tRNA quality control is required for efficient activation of the TOR pathway regulator Gln3p.

Authors:  Kyle Mohler; Rebecca Mann; Amanda Kyle; Noah Reynolds; Michael Ibba
Journal:  RNA Biol       Date:  2017-10-06       Impact factor: 4.652

7.  Stress signaling and cellular proliferation reverse the effects of mitochondrial mistranslation.

Authors:  Nicola Ferreira; Kara L Perks; Giulia Rossetti; Danielle L Rudler; Laetitia A Hughes; Judith A Ermer; Louis H Scott; Irina Kuznetsova; Tara R Richman; Vinod K Narayana; Laila N Abudulai; Anne-Marie J Shearwood; Henrietta Cserne Szappanos; Dedreia Tull; George C Yeoh; Livia C Hool; Aleksandra Filipovska; Oliver Rackham
Journal:  EMBO J       Date:  2019-11-13       Impact factor: 11.598

Review 8.  Chiral checkpoints during protein biosynthesis.

Authors:  Santosh Kumar Kuncha; Shobha P Kruparani; Rajan Sankaranarayanan
Journal:  J Biol Chem       Date:  2019-10-07       Impact factor: 5.157

9.  Codon misreading tRNAs promote tumor growth in mice.

Authors:  Mafalda Santos; Patricia M Pereira; A Sofia Varanda; Joana Carvalho; Mafalda Azevedo; Denisa D Mateus; Nuno Mendes; Patricia Oliveira; Fábio Trindade; Marta Teixeira Pinto; Renata Bordeira-Carriço; Fátima Carneiro; Rui Vitorino; Carla Oliveira; Manuel A S Santos
Journal:  RNA Biol       Date:  2018-06-07       Impact factor: 4.652

10.  Human trans-editing enzyme displays tRNA acceptor-stem specificity and relaxed amino acid selectivity.

Authors:  Oscar Vargas-Rodriguez; Marina Bakhtina; Daniel McGowan; Jawad Abid; Yuki Goto; Hiroaki Suga; Karin Musier-Forsyth
Journal:  J Biol Chem       Date:  2020-10-13       Impact factor: 5.157

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