Literature DB >> 28789271

High-NA open-top selective-plane illumination microscopy for biological imaging.

Ryan Mcgorty, Dan Xie, Bo Huang.   

Abstract

Selective-plane illumination microscopy (SPIM) provides unparalleled advantages for the volumetric imaging of living organisms over extended times. However, the spatial configuration of a SPIM system often limits its compatibility with many widely used biological sample holders such as multi-well chambers and plates. To solve this problem, we developed a high numerical aperture (NA) open-top configuration that places both the excitation and detection objectives on the opposite of the sample coverglass. We carried out a theoretical calculation to analyze the structure of the system-induced aberrations. We then experimentally compensated the system aberrations using adaptive optics combined with static optical components, demonstrating near-diffraction-limited performance in imaging fluorescently labeled cells.

Mesh:

Year:  2017        PMID: 28789271      PMCID: PMC5557333          DOI: 10.1364/OE.25.017798

Source DB:  PubMed          Journal:  Opt Express        ISSN: 1094-4087            Impact factor:   3.894


  24 in total

1.  Phase retrieval for high-numerical-aperture optical systems.

Authors:  Bridget M Hanser; Mats G L Gustafsson; David A Agard; John W Sedat
Journal:  Opt Lett       Date:  2003-05-15       Impact factor: 3.776

2.  Optical sectioning deep inside live embryos by selective plane illumination microscopy.

Authors:  Jan Huisken; Jim Swoger; Filippo Del Bene; Joachim Wittbrodt; Ernst H K Stelzer
Journal:  Science       Date:  2004-08-13       Impact factor: 47.728

3.  Quantitative high-speed imaging of entire developing embryos with simultaneous multiview light-sheet microscopy.

Authors:  Raju Tomer; Khaled Khairy; Fernando Amat; Philipp J Keller
Journal:  Nat Methods       Date:  2012-06-03       Impact factor: 28.547

4.  Deformable mirrors for all seasons and reasons.

Authors:  R H Freeman; J E Pearson
Journal:  Appl Opt       Date:  1982-02-15       Impact factor: 1.980

5.  Aberrations and their correction in light-sheet microscopy: a low-dimensional parametrization.

Authors:  Diwakar Turaga; Timothy E Holy
Journal:  Biomed Opt Express       Date:  2013-08-14       Impact factor: 3.732

6.  Whole-brain functional imaging with two-photon light-sheet microscopy.

Authors:  Sébastien Wolf; Willy Supatto; Georges Debrégeas; Pierre Mahou; Sergei G Kruglik; Jean-Marc Sintes; Emmanuel Beaurepaire; Raphaël Candelier
Journal:  Nat Methods       Date:  2015-05       Impact factor: 28.547

7.  Open-top selective plane illumination microscope for conventionally mounted specimens.

Authors:  Ryan McGorty; Harrison Liu; Daichi Kamiyama; Zhiqiang Dong; Su Guo; Bo Huang
Journal:  Opt Express       Date:  2015-06-15       Impact factor: 3.894

8.  Adaptive light-sheet microscopy for long-term, high-resolution imaging in living organisms.

Authors:  Loïc A Royer; William C Lemon; Raghav K Chhetri; Yinan Wan; Michael Coleman; Eugene W Myers; Philipp J Keller
Journal:  Nat Biotechnol       Date:  2016-10-31       Impact factor: 54.908

9.  Lattice light-sheet microscopy: imaging molecules to embryos at high spatiotemporal resolution.

Authors:  Bi-Chang Chen; Wesley R Legant; Kai Wang; Lin Shao; Daniel E Milkie; Michael W Davidson; Chris Janetopoulos; Xufeng S Wu; John A Hammer; Zhe Liu; Brian P English; Yuko Mimori-Kiyosue; Daniel P Romero; Alex T Ritter; Jennifer Lippincott-Schwartz; Lillian Fritz-Laylin; R Dyche Mullins; Diana M Mitchell; Joshua N Bembenek; Anne-Cecile Reymann; Ralph Böhme; Stephan W Grill; Jennifer T Wang; Geraldine Seydoux; U Serdar Tulu; Daniel P Kiehart; Eric Betzig
Journal:  Science       Date:  2014-10-23       Impact factor: 47.728

10.  Image-based adaptive optics for two-photon microscopy.

Authors:  Delphine Débarre; Edward J Botcherby; Tomoko Watanabe; Shankar Srinivas; Martin J Booth; Tony Wilson
Journal:  Opt Lett       Date:  2009-08-15       Impact factor: 3.776

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  14 in total

1.  Multi-resolution open-top light-sheet microscopy to enable efficient 3D pathology workflows.

Authors:  Lindsey A Barner; Adam K Glaser; Hongyi Huang; Lawrence D True; Jonathan T C Liu
Journal:  Biomed Opt Express       Date:  2020-10-22       Impact factor: 3.732

Review 2.  Light sheet approaches for improved precision in 3D localization-based super-resolution imaging in mammalian cells [Invited].

Authors:  Anna-Karin Gustavsson; Petar N Petrov; W E Moerner
Journal:  Opt Express       Date:  2018-05-14       Impact factor: 3.894

3.  Single-objective high-resolution confocal light sheet fluorescence microscopy for standard biological sample geometries.

Authors:  Stoyan Yordanov; Konstantin Neuhaus; Raimo Hartmann; Francisco Díaz-Pascual; Lucia Vidakovic; Praveen K Singh; Knut Drescher
Journal:  Biomed Opt Express       Date:  2021-05-14       Impact factor: 3.732

4.  Performance tradeoffs for single- and dual-objective open-top light-sheet microscope designs: a simulation-based analysis.

Authors:  Kevin W Bishop; Adam K Glaser; Jonathan T C Liu
Journal:  Biomed Opt Express       Date:  2020-07-24       Impact factor: 3.732

Review 5.  Towards systems tissue engineering: Elucidating the dynamics, spatial coordination, and individual cells driving emergent behaviors.

Authors:  Matthew S Hall; Joseph T Decker; Lonnie D Shea
Journal:  Biomaterials       Date:  2020-06-14       Impact factor: 12.479

6.  Solid immersion meniscus lens (SIMlens) for open-top light-sheet microscopy.

Authors:  Lindsey A Barner; Adam K Glaser; Lawrence D True; Nicholas P Reder; Jonathan T C Liu
Journal:  Opt Lett       Date:  2019-09-15       Impact factor: 3.776

7.  A hybrid open-top light-sheet microscope for versatile multi-scale imaging of cleared tissues.

Authors:  Adam K Glaser; Kevin W Bishop; Lindsey A Barner; Etsuo A Susaki; Shimpei I Kubota; Gan Gao; Robert B Serafin; Pooja Balaram; Emily Turschak; Philip R Nicovich; Hoyin Lai; Luciano A G Lucas; Yating Yi; Eva K Nichols; Hongyi Huang; Nicholas P Reder; Jasmine J Wilson; Ramya Sivakumar; Elya Shamskhou; Caleb R Stoltzfus; Xing Wei; Andrew K Hempton; Marko Pende; Prayag Murawala; Hans-Ulrich Dodt; Takato Imaizumi; Jay Shendure; Brian J Beliveau; Michael Y Gerner; Li Xin; Hu Zhao; Lawrence D True; R Clay Reid; Jayaram Chandrashekar; Hiroki R Ueda; Karel Svoboda; Jonathan T C Liu
Journal:  Nat Methods       Date:  2022-05-11       Impact factor: 47.990

8.  A multi-functional microfluidic device compatible with widefield and light sheet microscopy.

Authors:  Regan P Moore; Ellen C O'Shaughnessy; Yu Shi; Ana T Nogueira; Katelyn M Heath; Klaus M Hahn; Wesley R Legant
Journal:  Lab Chip       Date:  2021-12-21       Impact factor: 7.517

9.  Wide field-of-view volumetric imaging by a mesoscopic scanning oblique plane microscopy with switchable objective lenses.

Authors:  Wenjun Shao; Kivilcim Kilic; Wenqing Yin; Gregory Wirak; Xiaodan Qin; Hui Feng; David Boas; Christopher V Gabel; Ji Yi
Journal:  Quant Imaging Med Surg       Date:  2021-03

10.  Rapid tissue histology using multichannel confocal fluorescence microscopy with focus tracking.

Authors:  Juehyung Kang; Incheon Song; Hongrae Kim; Hyunjin Kim; Sunhye Lee; Yongdoo Choi; Hee Jin Chang; Dae Kyung Sohn; Hongki Yoo
Journal:  Quant Imaging Med Surg       Date:  2018-10
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