Literature DB >> 28691783

Two-Step Synthesis of Complex Artificial Macrocyclic Compounds.

Rudrakshula Madhavachary1, Eman M M Abdelraheem1,2, Arianna Rossetti1, Aleksandra Twarda-Clapa3, Bogdan Musielak3, Katarzyna Kurpiewska3, Justyna Kalinowska-Tłuścik3, Tad A Holak3, Alexander Dömling1.   

Abstract

The design and synthesis of head-to-tail linked artificial macrocycles using the Ugi-reaction has been developed. This synthetic approach of just two steps is unprecedented, short, efficient and works over a wide range of medium (8-11) and macrocyclic (≥12) loop sizes. The substrate scope and functional group tolerance is exceptional. Using this approach, we have synthesized 39 novel macrocycles by two or even one single synthetic operation. The properties of our macrocycles are discussed with respect to their potential to bind to biological targets that are not druggable by conventional, drug-like compounds. As an application of these artificial macrocycles we highlight potent p53-MDM2 antagonism.
© 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  Ugi reaction; drug discovery; macrocycles; protein-protein interactions; synthetic methods

Mesh:

Substances:

Year:  2017        PMID: 28691783      PMCID: PMC5660312          DOI: 10.1002/anie.201704426

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  22 in total

Review 1.  The exploration of macrocycles for drug discovery--an underexploited structural class.

Authors:  Edward M Driggers; Stephen P Hale; Jinbo Lee; Nicholas K Terrett
Journal:  Nat Rev Drug Discov       Date:  2008-07       Impact factor: 84.694

Review 2.  Contemporary strategies for peptide macrocyclization.

Authors:  Christopher J White; Andrei K Yudin
Journal:  Nat Chem       Date:  2011-06-23       Impact factor: 24.427

Review 3.  Macrocycles are great cycles: applications, opportunities, and challenges of synthetic macrocycles in drug discovery.

Authors:  Eric Marsault; Mark L Peterson
Journal:  J Med Chem       Date:  2011-03-07       Impact factor: 7.446

4.  Macrocyclization of Peptide Side Chains by the Ugi Reaction: Achieving Peptide Folding and Exocyclic N-Functionalization in One Shot.

Authors:  Aldrin V Vasco; Carlos S Pérez; Fidel E Morales; Hilda E Garay; Dimitar Vasilev; José A Gavín; Ludger A Wessjohann; Daniel G Rivera
Journal:  J Org Chem       Date:  2015-06-17       Impact factor: 4.354

Review 5.  Cell permeability beyond the rule of 5.

Authors:  Pär Matsson; Bradley C Doak; Björn Over; Jan Kihlberg
Journal:  Adv Drug Deliv Rev       Date:  2016-04-09       Impact factor: 15.470

6.  Artificial Macrocycles by Ugi Reaction and Passerini Ring Closure.

Authors:  Eman M M Abdelraheem; Katarzyna Kurpiewska; Justyna Kalinowska-Tłuścik; Alexander Dömling
Journal:  J Org Chem       Date:  2016-09-15       Impact factor: 4.354

7.  Quantifying the chameleonic properties of macrocycles and other high-molecular-weight drugs.

Authors:  Adrian Whitty; Mengqi Zhong; Lauren Viarengo; Dmitri Beglov; David R Hall; Sandor Vajda
Journal:  Drug Discov Today       Date:  2016-02-15       Impact factor: 7.851

8.  Nonclassical Size Dependence of Permeation Defines Bounds for Passive Adsorption of Large Drug Molecules.

Authors:  Cameron R Pye; William M Hewitt; Joshua Schwochert; Terra D Haddad; Chad E Townsend; Lyns Etienne; Yongtong Lao; Chris Limberakis; Akihiro Furukawa; Alan M Mathiowetz; David A Price; Spiros Liras; R Scott Lokey
Journal:  J Med Chem       Date:  2017-01-25       Impact factor: 7.446

9.  Passive Membrane Permeability of Macrocycles Can Be Controlled by Exocyclic Amide Bonds.

Authors:  Jennifer L Hickey; Serge Zaretsky; Megan A St Denis; Sai Kumar Chakka; M Monzur Morshed; Conor C G Scully; Andrew L Roughton; Andrei K Yudin
Journal:  J Med Chem       Date:  2016-05-19       Impact factor: 7.446

10.  Comprehensive analysis of loops at protein-protein interfaces for macrocycle design.

Authors:  Jason Gavenonis; Bradley A Sheneman; Timothy R Siegert; Matthew R Eshelman; Joshua A Kritzer
Journal:  Nat Chem Biol       Date:  2014-07-20       Impact factor: 15.040

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  13 in total

1.  Structure and Reactivity of Glycosyl Isocyanides.

Authors:  Constantinos G Neochoritis; Ehsan Ghonchepour; Maryam Kazemi Miraki; Tryfon Zarganes-Tzitzikas; Katarzyna Kurpiewska; Justyna Kalinowska-Tłuścik; Alexander Dömling
Journal:  European J Org Chem       Date:  2018-11-22

2.  A fluorinated indole-based MDM2 antagonist selectively inhibits the growth of p53wt osteosarcoma cells.

Authors:  Lukasz Skalniak; Aleksandra Twarda-Clapa; Constantinos G Neochoritis; Ewa Surmiak; Monika Machula; Aneta Wisniewska; Beata Labuzek; Ameena M Ali; Sylwia Krzanik; Grzegorz Dubin; Matthew Groves; Alexander Dömling; Tad A Holak
Journal:  FEBS J       Date:  2019-02-16       Impact factor: 5.542

3.  Artificial Macrocycles by Ugi Reaction and Passerini Ring Closure.

Authors:  Eman M M Abdelraheem; Katarzyna Kurpiewska; Justyna Kalinowska-Tłuścik; Alexander Dömling
Journal:  J Org Chem       Date:  2016-09-15       Impact factor: 4.354

4.  Concise Synthesis of Macrocycles by Multicomponent Reactions.

Authors:  Eman M M Abdelraheem; Samad Khaksar; Alexander Dömling
Journal:  Synthesis (Stuttg)       Date:  2018-01-10       Impact factor: 3.157

5.  Two-Step Macrocycle Synthesis by Classical Ugi Reaction.

Authors:  Eman M M Abdelraheem; Samad Khaksar; Katarzyna Kurpiewska; Justyna Kalinowska-Tłuścik; Shabnam Shaabani; Alexander Dömling
Journal:  J Org Chem       Date:  2018-01-24       Impact factor: 4.354

6.  Ugi Multicomponent Reaction Based Synthesis of Medium-Sized Rings.

Authors:  Eman M M Abdelraheem; Rudrakshula Madhavachary; Arianna Rossetti; Katarzyna Kurpiewska; Justyna Kalinowska-Tłuścik; Shabnam Shaabani; Alexander Dömling
Journal:  Org Lett       Date:  2017-10-30       Impact factor: 6.005

7.  Design of indole- and MCR-based macrocycles as p53-MDM2 antagonists.

Authors:  Constantinos G Neochoritis; Maryam Kazemi Miraki; Eman M M Abdelraheem; Ewa Surmiak; Tryfon Zarganes-Tzitzikas; Beata Łabuzek; Tad A Holak; Alexander Dömling
Journal:  Beilstein J Org Chem       Date:  2019-02-20       Impact factor: 2.883

8.  Rapid approach to complex boronic acids.

Authors:  Constantinos G Neochoritis; Shabnam Shaabani; Maryam Ahmadianmoghaddam; Tryfon Zarganes-Tzitzikas; Li Gao; Michaela Novotná; Tatiana Mitríková; Atilio Reyes Romero; Marina Ika Irianti; Ruixue Xu; Joe Olechno; Richard Ellson; Victoria Helan; Michael Kossenjans; Matthew R Groves; Alexander Dömling
Journal:  Sci Adv       Date:  2019-07-05       Impact factor: 14.136

9.  Concise Synthesis of Tetrazole Macrocycle.

Authors:  Eman M M Abdelraheem; Michel P de Haan; Pravin Patil; Katarzyna Kurpiewska; Justyna Kalinowska-Tłuścik; Shabnam Shaabani; Alexander Dömling
Journal:  Org Lett       Date:  2017-09-13       Impact factor: 6.005

10.  Synthetic fermentation of β-peptide macrocycles by thiadiazole-forming ring-closing reactions.

Authors:  Jonathan G Hubert; Iain A Stepek; Hidetoshi Noda; Jeffrey W Bode
Journal:  Chem Sci       Date:  2018-01-08       Impact factor: 9.825

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