Literature DB >> 28683555

X-ray Crystallographic Structure of a Compact Dodecamer from a Peptide Derived from Aβ16-36.

Patrick J Salveson1, Ryan K Spencer1, Adam G Kreutzer1, James S Nowick1.   

Abstract

The assembly of the β-amyloid peptide, Aβ, into soluble oligomers is associated with neurodegeneration in Alzheimer's disease. The Aβ oligomers are thought to be composed of β-hairpins. Here, the effect of shifting the residue pairing of the β-hairpins on the structures of the oligomers that form is explored through X-ray crystallography. Three residue pairings were investigated using constrained macrocyclic β-hairpins in which Aβ30-36 is juxtaposed with Aβ17-23, Aβ16-22, and Aβ15-21. The Aβ16-22-Aβ30-36 pairing forms a compact ball-shaped dodecamer composed of fused triangular trimers. This dodecamer may help explain the structures of the trimers and dodecamers formed by full-length Aβ.

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Year:  2017        PMID: 28683555      PMCID: PMC5776032          DOI: 10.1021/acs.orglett.7b01445

Source DB:  PubMed          Journal:  Org Lett        ISSN: 1523-7052            Impact factor:   6.005


  22 in total

1.  Transient β-hairpin formation in α-synuclein monomer revealed by coarse-grained molecular dynamics simulation.

Authors:  Hang Yu; Wei Han; Wen Ma; Klaus Schulten
Journal:  J Chem Phys       Date:  2015-12-28       Impact factor: 3.488

2.  Structural characterization of a soluble amyloid beta-peptide oligomer.

Authors:  Liping Yu; Rohinton Edalji; John E Harlan; Thomas F Holzman; Ana Pereda Lopez; Boris Labkovsky; Heinz Hillen; Stefan Barghorn; Ulrich Ebert; Paul L Richardson; Laura Miesbauer; Larry Solomon; Diane Bartley; Karl Walter; Robert W Johnson; Philip J Hajduk; Edward T Olejniczak
Journal:  Biochemistry       Date:  2009-03-10       Impact factor: 3.162

3.  Antiparallel triple-strand architecture for prefibrillar Aβ42 oligomers.

Authors:  Lei Gu; Cong Liu; James C Stroud; Sam Ngo; Lin Jiang; Zhefeng Guo
Journal:  J Biol Chem       Date:  2014-08-12       Impact factor: 5.157

4.  A hexameric peptide barrel as building block of amyloid-β protofibrils.

Authors:  Christofer Lendel; Morten Bjerring; Anatoly Dubnovitsky; Robert T Kelly; Andrei Filippov; Oleg N Antzutkin; Niels Chr Nielsen; Torleif Härd
Journal:  Angew Chem Int Ed Engl       Date:  2014-09-26       Impact factor: 15.336

5.  In vivo demonstration that alpha-synuclein oligomers are toxic.

Authors:  Beate Winner; Roberto Jappelli; Samir K Maji; Paula A Desplats; Leah Boyer; Stefan Aigner; Claudia Hetzer; Thomas Loher; Marçal Vilar; Silvia Campioni; Christos Tzitzilonis; Alice Soragni; Sebastian Jessberger; Helena Mira; Antonella Consiglio; Emiley Pham; Eliezer Masliah; Fred H Gage; Roland Riek
Journal:  Proc Natl Acad Sci U S A       Date:  2011-02-15       Impact factor: 11.205

6.  X-ray Crystallographic Structures of Oligomers of Peptides Derived from β2-Microglobulin.

Authors:  Ryan K Spencer; Adam G Kreutzer; Patrick J Salveson; Hao Li; James S Nowick
Journal:  J Am Chem Soc       Date:  2015-05-12       Impact factor: 15.419

7.  A new turn structure for the formation of beta-hairpins in peptides.

Authors:  James S Nowick; Justin O Brower
Journal:  J Am Chem Soc       Date:  2003-01-29       Impact factor: 15.419

8.  Human islet amyloid polypeptide monomers form ordered beta-hairpins: a possible direct amyloidogenic precursor.

Authors:  Nicholas F Dupuis; Chun Wu; Joan-Emma Shea; Michael T Bowers
Journal:  J Am Chem Soc       Date:  2009-12-30       Impact factor: 15.419

9.  A Newcomer's Guide to Peptide Crystallography.

Authors:  Ryan K Spencer; James S Nowick
Journal:  Isr J Chem       Date:  2015-06-01       Impact factor: 3.333

10.  β-Hairpin of Islet Amyloid Polypeptide Bound to an Aggregation Inhibitor.

Authors:  Ewa A Mirecka; Sophie Feuerstein; Lothar Gremer; Gunnar F Schröder; Matthias Stoldt; Dieter Willbold; Wolfgang Hoyer
Journal:  Sci Rep       Date:  2016-09-19       Impact factor: 4.379

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  11 in total

1.  Controlling the Oligomerization State of Aβ-Derived Peptides with Light.

Authors:  Patrick J Salveson; Sepehr Haerianardakani; Alexander Thuy-Boun; Adam G Kreutzer; James S Nowick
Journal:  J Am Chem Soc       Date:  2018-04-20       Impact factor: 15.419

2.  Effects of N-Terminal Residues on the Assembly of Constrained β-Hairpin Peptides Derived from Aβ.

Authors:  Tuan D Samdin; Michał Wierzbicki; Adam G Kreutzer; William J Howitz; Mike Valenzuela; Alberto Smith; Victoria Sahrai; Nicholas L Truex; Matthew Klun; James S Nowick
Journal:  J Am Chem Soc       Date:  2020-06-22       Impact factor: 15.419

Review 3.  Elucidating the Structures of Amyloid Oligomers with Macrocyclic β-Hairpin Peptides: Insights into Alzheimer's Disease and Other Amyloid Diseases.

Authors:  Adam G Kreutzer; James S Nowick
Journal:  Acc Chem Res       Date:  2018-03-06       Impact factor: 22.384

4.  X-ray Crystallography Reveals Parallel and Antiparallel β-Sheet Dimers of a β-Hairpin Derived from Aβ16-36 that Assemble to Form Different Tetramers.

Authors:  Adam G Kreutzer; Tuan D Samdin; Gretchen Guaglianone; Ryan K Spencer; James S Nowick
Journal:  ACS Chem Neurosci       Date:  2020-07-14       Impact factor: 4.418

5.  Effects of Familial Alzheimer's Disease Mutations on the Assembly of a β-Hairpin Peptide Derived from Aβ16-36.

Authors:  Kate J McKnelly; Adam G Kreutzer; William J Howitz; Katelyn Haduong; Stan Yoo; Candace Hart; James S Nowick
Journal:  Biochemistry       Date:  2022-02-25       Impact factor: 3.321

6.  A Disulfide-Stabilized Aβ that Forms Dimers but Does Not Form Fibrils.

Authors:  Sheng Zhang; Stan Yoo; Dalton T Snyder; Benjamin B Katz; Amy Henrickson; Borries Demeler; Vicki H Wysocki; Adam G Kreutzer; James S Nowick
Journal:  Biochemistry       Date:  2022-01-26       Impact factor: 3.321

Review 7.  Exploring amyloid oligomers with peptide model systems.

Authors:  Tuan D Samdin; Adam G Kreutzer; James S Nowick
Journal:  Curr Opin Chem Biol       Date:  2021-07-03       Impact factor: 8.972

8.  Synthesis and study of macrocyclic β-hairpin peptides for investigating amyloid oligomers.

Authors:  Gretchen Guaglianone; Adam G Kreutzer; James S Nowick
Journal:  Methods Enzymol       Date:  2021-05-24       Impact factor: 1.682

Review 9.  High-Speed Atomic Force Microscopy Reveals the Structural Dynamics of the Amyloid-β and Amylin Aggregation Pathways.

Authors:  Takahiro Watanabe-Nakayama; Bikash R Sahoo; Ayyalusamy Ramamoorthy; Kenjiro Ono
Journal:  Int J Mol Sci       Date:  2020-06-16       Impact factor: 5.923

10.  A Hexamer of a Peptide Derived from Aβ16-36.

Authors:  Adam G Kreutzer; Ryan K Spencer; Kate J McKnelly; Stan Yoo; Imane L Hamza; Patrick J Salveson; James S Nowick
Journal:  Biochemistry       Date:  2017-10-27       Impact factor: 3.162

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