Literature DB >> 32584538

X-ray Crystallography Reveals Parallel and Antiparallel β-Sheet Dimers of a β-Hairpin Derived from Aβ16-36 that Assemble to Form Different Tetramers.

Adam G Kreutzer, Tuan D Samdin, Gretchen Guaglianone, Ryan K Spencer, James S Nowick.   

Abstract

High-resolution structures of oligomers formed by the β-amyloid peptide, Aβ, are important for understanding the molecular basis of Alzheimer's disease. Dimers of Aβ are linked to the pathogenesis and progression of Alzheimer's disease, and tetramers of Aβ are neurotoxic. This paper reports the X-ray crystallographic structures of dimers and tetramers, as well as an octamer, formed by a peptide derived from the central and C-terminal regions of Aβ. In the crystal lattice, the peptide assembles to form two different dimers-an antiparallel β-sheet dimer and a parallel β-sheet dimer-that each further self-assemble to form two different tetramers-a sandwich-like tetramer and a twisted β-sheet tetramer. The structures of these dimers and tetramers derived from Aβ serve as potential models for dimers and tetramers of full-length Aβ that form in vitro and in Alzheimer's disease-afflicted brains.

Entities:  

Keywords:  Alzheimer’s disease; Amyloid; Aβ; Crystal structure; Dimer; Oligomer; Tetramer

Mesh:

Substances:

Year:  2020        PMID: 32584538      PMCID: PMC7811405          DOI: 10.1021/acschemneuro.0c00290

Source DB:  PubMed          Journal:  ACS Chem Neurosci        ISSN: 1948-7193            Impact factor:   4.418


  47 in total

1.  Replica exchange molecular dynamics method for protein folding simulation.

Authors:  Ruhong Zhou
Journal:  Methods Mol Biol       Date:  2007

2.  Crystal structure of a human prion protein fragment reveals a motif for oligomer formation.

Authors:  Marcin I Apostol; Kay Perry; Witold K Surewicz
Journal:  J Am Chem Soc       Date:  2013-07-02       Impact factor: 15.419

3.  AD synapses contain abundant Aβ monomer and multiple soluble oligomers, including a 56-kDa assembly.

Authors:  Sophie Sokolow; Kristen M Henkins; Tina Bilousova; Carol A Miller; Harry V Vinters; Wayne Poon; Gregory M Cole; Karen Hoppens Gylys
Journal:  Neurobiol Aging       Date:  2011-07-07       Impact factor: 4.673

Review 4.  Elucidating the Structures of Amyloid Oligomers with Macrocyclic β-Hairpin Peptides: Insights into Alzheimer's Disease and Other Amyloid Diseases.

Authors:  Adam G Kreutzer; James S Nowick
Journal:  Acc Chem Res       Date:  2018-03-06       Impact factor: 22.384

5.  Large Soluble Oligomers of Amyloid β-Protein from Alzheimer Brain Are Far Less Neuroactive Than the Smaller Oligomers to Which They Dissociate.

Authors:  Ting Yang; Shaomin Li; Huixin Xu; Dominic M Walsh; Dennis J Selkoe
Journal:  J Neurosci       Date:  2017-01-04       Impact factor: 6.167

6.  Fibril structure of amyloid-β(1-42) by cryo-electron microscopy.

Authors:  Lothar Gremer; Daniel Schölzel; Carla Schenk; Elke Reinartz; Jörg Labahn; Raimond B G Ravelli; Markus Tusche; Carmen Lopez-Iglesias; Wolfgang Hoyer; Henrike Heise; Dieter Willbold; Gunnar F Schröder
Journal:  Science       Date:  2017-09-07       Impact factor: 47.728

7.  Aβ(1-42) fibril structure illuminates self-recognition and replication of amyloid in Alzheimer's disease.

Authors:  Yiling Xiao; Buyong Ma; Dan McElheny; Sudhakar Parthasarathy; Fei Long; Minako Hoshi; Ruth Nussinov; Yoshitaka Ishii
Journal:  Nat Struct Mol Biol       Date:  2015-05-04       Impact factor: 15.369

8.  X-ray Crystallographic Structures of a Trimer, Dodecamer, and Annular Pore Formed by an Aβ17-36 β-Hairpin.

Authors:  Adam G Kreutzer; Imane L Hamza; Ryan K Spencer; James S Nowick
Journal:  J Am Chem Soc       Date:  2016-03-29       Impact factor: 15.419

9.  Solid-state NMR structure of a pathogenic fibril of full-length human α-synuclein.

Authors:  Marcus D Tuttle; Gemma Comellas; Andrew J Nieuwkoop; Dustin J Covell; Deborah A Berthold; Kathryn D Kloepper; Joseph M Courtney; Jae K Kim; Alexander M Barclay; Amy Kendall; William Wan; Gerald Stubbs; Charles D Schwieters; Virginia M Y Lee; Julia M George; Chad M Rienstra
Journal:  Nat Struct Mol Biol       Date:  2016-03-28       Impact factor: 15.369

10.  A critical role for the self-assembly of Amyloid-β1-42 in neurodegeneration.

Authors:  Karen E Marshall; Devkee M Vadukul; Liza Dahal; Alina Theisen; Milena W Fowler; Youssra Al-Hilaly; Lenzie Ford; György Kemenes; Iain J Day; Kevin Staras; Louise C Serpell
Journal:  Sci Rep       Date:  2016-07-22       Impact factor: 4.379

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  6 in total

1.  Mechanistic Kinetic Model Reveals How Amyloidogenic Hydrophobic Patches Facilitate the Amyloid-β Fibril Elongation.

Authors:  Hengyi Xie; Ana Rojas; Gia G Maisuradze; George Khelashvili
Journal:  ACS Chem Neurosci       Date:  2022-03-08       Impact factor: 4.418

2.  A Disulfide-Stabilized Aβ that Forms Dimers but Does Not Form Fibrils.

Authors:  Sheng Zhang; Stan Yoo; Dalton T Snyder; Benjamin B Katz; Amy Henrickson; Borries Demeler; Vicki H Wysocki; Adam G Kreutzer; James S Nowick
Journal:  Biochemistry       Date:  2022-01-26       Impact factor: 3.321

3.  Computational Investigation of the Binding Dynamics of Oligo p-Phenylene Ethynylene Fluorescence Sensors and Aβ Oligomers.

Authors:  Tye D Martin; Gabriella Brinkley; David G Whitten; Eva Y Chi; Deborah G Evans
Journal:  ACS Chem Neurosci       Date:  2020-11-03       Impact factor: 4.418

Review 4.  Exploring amyloid oligomers with peptide model systems.

Authors:  Tuan D Samdin; Adam G Kreutzer; James S Nowick
Journal:  Curr Opin Chem Biol       Date:  2021-07-03       Impact factor: 8.972

5.  Synthesis and study of macrocyclic β-hairpin peptides for investigating amyloid oligomers.

Authors:  Gretchen Guaglianone; Adam G Kreutzer; James S Nowick
Journal:  Methods Enzymol       Date:  2021-05-24       Impact factor: 1.682

6.  Elucidating the Oligomerization and Cellular Interactions of a Trimer Derived from Aβ through Fluorescence and Mass Spectrometric Studies.

Authors:  Gretchen Guaglianone; Belén Torrado; Yu-Fu Lin; Matthew C Watkins; Vicki H Wysocki; Enrico Gratton; James S Nowick
Journal:  ACS Chem Neurosci       Date:  2022-07-27       Impact factor: 5.780

  6 in total

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