Literature DB >> 12537479

A new turn structure for the formation of beta-hairpins in peptides.

James S Nowick1, Justin O Brower.   

Abstract

Previous studies by Gellman and co-workers have elegantly shown that mirror-image beta-turns based upon d-Pro-Gly are especially good at stabilizing beta-hairpins and have demonstrated that peptide 1 [Arg-Trp-Gln-Tyr-Val-d-Pro-Gly-Lys-Phe-Thr-Val-Gln-NH2] folds into a well-defined beta-hairpin [Espinosa, J. F.; Gellman, S. H. Angew. Chem., Int. Ed. 2000, 39, 2330-2333]. The present study establishes that the amino acid ornithine (Orn) also forms a turn structure that is excellent at stabilizing beta-hairpins when linked through the delta-amino group and that this turn is comparable to d-Pro-Gly in ability to induce beta-hairpin formation. Thus, 1H NMR chemical shift and NOE studies establish that Orn-containing analogue 2 [Arg-Trp-Gln-Tyr-Val-deltaOrn-Lys-Phe-Thr-Val-Gln-NH2] is comparable in structure to peptide 1. The present study also establishes that the Orn turn is superior to Asn-Gly turns and that replacement of the deltaOrn with epsilonLys or d-deltaOrn generates structures that do not fold significantly.

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Year:  2003        PMID: 12537479     DOI: 10.1021/ja028938a

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  37 in total

1.  Controlling the Oligomerization State of Aβ-Derived Peptides with Light.

Authors:  Patrick J Salveson; Sepehr Haerianardakani; Alexander Thuy-Boun; Adam G Kreutzer; James S Nowick
Journal:  J Am Chem Soc       Date:  2018-04-20       Impact factor: 15.419

2.  Exploring beta-sheet structure and interactions with chemical model systems.

Authors:  James S Nowick
Journal:  Acc Chem Res       Date:  2008-09-18       Impact factor: 22.384

3.  Heterogeneous-Backbone Foldamer Mimics of Zinc Finger Tertiary Structure.

Authors:  Kelly L George; W Seth Horne
Journal:  J Am Chem Soc       Date:  2017-06-05       Impact factor: 15.419

Review 4.  The supramolecular chemistry of β-sheets.

Authors:  Pin-Nan Cheng; Johnny D Pham; James S Nowick
Journal:  J Am Chem Soc       Date:  2013-04-02       Impact factor: 15.419

5.  Effects of N-Terminal Residues on the Assembly of Constrained β-Hairpin Peptides Derived from Aβ.

Authors:  Tuan D Samdin; Michał Wierzbicki; Adam G Kreutzer; William J Howitz; Mike Valenzuela; Alberto Smith; Victoria Sahrai; Nicholas L Truex; Matthew Klun; James S Nowick
Journal:  J Am Chem Soc       Date:  2020-06-22       Impact factor: 15.419

6.  A new artificial beta-sheet that dimerizes through parallel beta-sheet interactions.

Authors:  Sergiy Levin; James S Nowick
Journal:  Org Lett       Date:  2009-02-19       Impact factor: 6.005

7.  X-ray Crystallographic Structures of Oligomers of Peptides Derived from β2-Microglobulin.

Authors:  Ryan K Spencer; Adam G Kreutzer; Patrick J Salveson; Hao Li; James S Nowick
Journal:  J Am Chem Soc       Date:  2015-05-12       Impact factor: 15.419

8.  X-ray crystallographic structure of an artificial beta-sheet dimer.

Authors:  Omid Khakshoor; Aaron J Lin; Tyler P Korman; Michael R Sawaya; Shiou-Chuan Tsai; David Eisenberg; James S Nowick
Journal:  J Am Chem Soc       Date:  2010-08-25       Impact factor: 15.419

9.  Use of disulfide "staples" to stabilize beta-sheet quaternary structure.

Authors:  Omid Khakshoor; James S Nowick
Journal:  Org Lett       Date:  2009-07-16       Impact factor: 6.005

10.  An artificial beta-sheet that dimerizes through parallel beta-sheet interactions.

Authors:  Sergiy Levin; James S Nowick
Journal:  J Am Chem Soc       Date:  2007-10-06       Impact factor: 15.419

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