| Literature DB >> 27641459 |
Ewa A Mirecka1, Sophie Feuerstein2, Lothar Gremer1,2, Gunnar F Schröder1,2, Matthias Stoldt1,2, Dieter Willbold1,2, Wolfgang Hoyer1,2.
Abstract
In type 2 diabetes, the formation of islet amyloid consisting of islet amyloid polypeptide (IAPP) is associated with reduction in β-cell mass and contributes to the failure of islet cell transplantation. Rational design of inhibitors of IAPP amyloid formation has therapeutic potential, but is hampered by the lack of structural information on inhibitor complexes of the conformationally flexible, aggregation-prone IAPP. Here we characterize a β-hairpin conformation of IAPP in complex with the engineered binding protein β-wrapin HI18. The β-strands correspond to two amyloidogenic motifs, 12-LANFLVH-18 and 22-NFGAILS-28, which are connected by a turn established around Ser-20. Besides backbone hydrogen bonding, the IAPP:HI18 interaction surface is dominated by non-polar contacts involving hydrophobic side chains of the IAPP β-strands. Apart from monomers, HI18 binds oligomers and fibrils and inhibits IAPP aggregation and toxicity at low substoichiometric concentrations. The IAPP β-hairpin can serve as a molecular recognition motif enabling control of IAPP aggregation.Entities:
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Year: 2016 PMID: 27641459 PMCID: PMC5027568 DOI: 10.1038/srep33474
Source DB: PubMed Journal: Sci Rep ISSN: 2045-2322 Impact factor: 4.379
Figure 1Sequences and topology of the IAPP:HI18 complex.
(a) Amino acid sequences of IAPP and HI18. The two subunits of HI18 are linked by a disulfide bond involving the Cys-28 residues (yellow). Residues that are exchanged in HI18 compared to ZAβ3 and AS10 are underlined in blue and magenta, respectively. The segments that constitute the folded core of the IAPP:HI18 complex are underlined in black. The positions of α-helical and β-sheet secondary structure in the complex are indicated by cylinders and arrows, respectively. (b) (1H–15N)-HSQC NMR spectra of [U-13C,15N]-IAPP in the absence (blue) and presence (green) of a 20% molar excess of [NA]-HI18. Selected resonances experiencing large changes in chemical shifts upon binding are highlighted. (c) Ribbon drawing of the IAPP:HI18 complex. Residues 10–30 of IAPP are shown in green. Residues 13–56 of the two HI18 subunits are shown in light and dark gray with semi-transparent surface display.
Figure 2β-Hairpin conformation of IAPP bound to HI18.
(a) Scheme of the β-sheet registry in the IAPP:HI18 complex. β-Strand backbones of IAPP (green) and the two HI18 subunits (light and dark grey) are displayed in straight extended conformation for clarity. Long-range HN-HN and HN-Hα NOE connectivities defining the β-sheet registry are represented by arrows. Backbone hydrogen bonds identified by PyMOL are shown as dotted lines. (b) Ribbon and stick representation of the IAPP β-hairpin (green) interacting with HI18. The two HI18 subunits are shown in semi-transparent and non-transparent surface representation, respectively. Hydrophobic residues in the IAPP β-hairpin are labelled. The sulfur atoms constituting the disulfide bond between the HI18 subunits are displayed in yellow in the image on the right. (c) Comparison of the β-hairpin of IAPP (green) bound to HI18 with β-hairpins of Aβ (red) and α-synuclein (orange) bound to the related binding proteins ZAβ3 (PDB:2OTK) and AS69 (PDB:4BXL), respectively. (d) Sequence alignment of IAPP and Aβ based on sequence similarity3233 (top, blue) or based on the positions of the β-strands in the HI18- and ZAβ3-complexes (bottom, green). (e) Aromatic-aromatic and aromatic-hydrophobic interactions in the core of the IAPP:HI18 complex. Phe-15 and Phe-23 of IAPP are located in the central core of the complex where they are in contact with each other. One face of both Phe-15 and Phe-23 packs against an extended hydrophobic interaction surface composed of the side chains of Leu-27, Ile-31, and Ile-34 (displayed as spheres) of the two HI18 subunits.
Figure 3HI18 inhibits amyloid formation and toxicity of IAPP at low substoichiometric concentrations.
(a) ThT time course of amyloid formation of IAPP in the absence and presence of HI18 (circles). To obtain half-times of aggregation (t1/2) the data was fitted to a model of secondary nucleation dominated aggregation kinetics using the program AmyloFit5556 (solid lines). (b) AFM amplitude images of IAPP in absence and presence of HI18 at the end of the aggregation experiment in (a). (c) MTT assay to determine the viability of human 1.1B4 pancreatic islet cells upon addition of IAPP aged in the absence or presence of HI18. The data are representative of experiments carried out in quadruplicate (mean ± s.d.), expressed as percentage relative to the untreated cells (control). (d) Interaction of HI18 with IAPP oligomers and fibrils analyzed by TEM with immunogold labeling detecting specifically HI18. Top panels, HI18 was added to a sample withdrawn during the growth phase of an IAPP aggregation reaction proceeding in the absence of HI18, and detected by immunogold-labeling. The image on the right is a magnification of the boxed area in the left image. Bottom panels, control samples in which HI18 addition was omitted, confirming the absence of unspecific immunogold labeling of IAPP aggregates.