Literature DB >> 28683341

The N6-Methyladenosine RNA modification in pluripotency and reprogramming.

Francesca Aguilo1, Martin J Walsh2.   

Abstract

Chemical modifications of RNA provide a direct and rapid way to manipulate the existing transcriptome, allowing rapid responses to the changing environment further enriching the regulatory capacity of RNA. N6-Methyladenosine (m6A) has been identified as the most abundant internal modification of messenger RNA in eukaryotes, linking external stimuli to an intricate network of transcriptional, post-transcriptional and translational processes. M6A modification affects a broad spectrum of cellular functions, including maintenance of the pluripotency of embryonic stem cells (ESCs) and the reprogramming of somatic cells into induced pluripotent stem cells (iPSCs). In this review, we summarize the most recent findings on m6A modification with special focus on the different studies describing how m6A is implicated in ESC self-renewal, cell fate specification and iPSC generation.
Copyright © 2017 Elsevier Ltd. All rights reserved.

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Year:  2017        PMID: 28683341      PMCID: PMC5626584          DOI: 10.1016/j.gde.2017.06.006

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  51 in total

1.  Methylated, blocked 5 termini in HeLa cell mRNA.

Authors:  Y Furuichi; M Morgan; A J Shatkin; W Jelinek; M Salditt-Georgieff; J E Darnell
Journal:  Proc Natl Acad Sci U S A       Date:  1975-05       Impact factor: 11.205

2.  The obesity related gene, FTO, interacts with APOE, and is associated with Alzheimer's disease risk: a prospective cohort study.

Authors:  Lina Keller; Weili Xu; Hui-Xin Wang; Bengt Winblad; Laura Fratiglioni; Caroline Graff
Journal:  J Alzheimers Dis       Date:  2011       Impact factor: 4.472

3.  N(6)-methyladenosine Modulates Messenger RNA Translation Efficiency.

Authors:  Xiao Wang; Boxuan Simen Zhao; Ian A Roundtree; Zhike Lu; Dali Han; Honghui Ma; Xiaocheng Weng; Kai Chen; Hailing Shi; Chuan He
Journal:  Cell       Date:  2015-06-04       Impact factor: 41.582

4.  m(6)A RNA modification controls cell fate transition in mammalian embryonic stem cells.

Authors:  Pedro J Batista; Benoit Molinie; Jinkai Wang; Kun Qu; Jiajing Zhang; Lingjie Li; Donna M Bouley; Ernesto Lujan; Bahareh Haddad; Kaveh Daneshvar; Ava C Carter; Ryan A Flynn; Chan Zhou; Kok-Seong Lim; Peter Dedon; Marius Wernig; Alan C Mullen; Yi Xing; Cosmas C Giallourakis; Howard Y Chang
Journal:  Cell Stem Cell       Date:  2014-10-16       Impact factor: 24.633

5.  Comprehensive analysis of mRNA methylation reveals enrichment in 3' UTRs and near stop codons.

Authors:  Kate D Meyer; Yogesh Saletore; Paul Zumbo; Olivier Elemento; Christopher E Mason; Samie R Jaffrey
Journal:  Cell       Date:  2012-05-17       Impact factor: 41.582

6.  Purification and cDNA cloning of the AdoMet-binding subunit of the human mRNA (N6-adenosine)-methyltransferase.

Authors:  J A Bokar; M E Shambaugh; D Polayes; A G Matera; F M Rottman
Journal:  RNA       Date:  1997-11       Impact factor: 4.942

7.  5' UTR m(6)A Promotes Cap-Independent Translation.

Authors:  Kate D Meyer; Deepak P Patil; Jun Zhou; Alexandra Zinoviev; Maxim A Skabkin; Olivier Elemento; Tatyana V Pestova; Shu-Bing Qian; Samie R Jaffrey
Journal:  Cell       Date:  2015-10-22       Impact factor: 41.582

8.  ALKBH5 is a mammalian RNA demethylase that impacts RNA metabolism and mouse fertility.

Authors:  Guanqun Zheng; John Arne Dahl; Yamei Niu; Peter Fedorcsak; Chun-Min Huang; Charles J Li; Cathrine B Vågbø; Yue Shi; Wen-Ling Wang; Shu-Hui Song; Zhike Lu; Ralph P G Bosmans; Qing Dai; Ya-Juan Hao; Xin Yang; Wen-Ming Zhao; Wei-Min Tong; Xiu-Jie Wang; Florian Bogdan; Kari Furu; Ye Fu; Guifang Jia; Xu Zhao; Jun Liu; Hans E Krokan; Arne Klungland; Yun-Gui Yang; Chuan He
Journal:  Mol Cell       Date:  2012-11-21       Impact factor: 17.970

9.  The RNA Modification Database, RNAMDB: 2011 update.

Authors:  William A Cantara; Pamela F Crain; Jef Rozenski; James A McCloskey; Kimberly A Harris; Xiaonong Zhang; Franck A P Vendeix; Daniele Fabris; Paul F Agris
Journal:  Nucleic Acids Res       Date:  2010-11-10       Impact factor: 16.971

10.  N6-methyladenosine in nuclear RNA is a major substrate of the obesity-associated FTO.

Authors:  Guifang Jia; Ye Fu; Xu Zhao; Qing Dai; Guanqun Zheng; Ying Yang; Chengqi Yi; Tomas Lindahl; Tao Pan; Yun-Gui Yang; Chuan He
Journal:  Nat Chem Biol       Date:  2011-10-16       Impact factor: 15.040

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  15 in total

1.  FTO overexpression inhibits apoptosis of hypoxia/reoxygenation-treated myocardial cells by regulating m6A modification of Mhrt.

Authors:  Wei Shen; Hongqi Li; Hao Su; Kangyu Chen; Ji Yan
Journal:  Mol Cell Biochem       Date:  2021-02-06       Impact factor: 3.396

Review 2.  N6-methyladenosine as a Novel Regulator of Brain Physiology and Diseases.

Authors:  Bing Han; Hong-Hong Yao
Journal:  Curr Med Sci       Date:  2020-07-17

Review 3.  Biology of RNA Surveillance in Development and Disease.

Authors:  Brice Laffleur; Uttiya Basu
Journal:  Trends Cell Biol       Date:  2019-02-10       Impact factor: 20.808

4.  METTL3 modulates chromatin and transcription dynamics during cell fate transition.

Authors:  Xiao-Min Liu; Yuanhui Mao; Shen Wang; Jun Zhou; Shu-Bing Qian
Journal:  Cell Mol Life Sci       Date:  2022-10-20       Impact factor: 9.207

5.  Differential roles of YTHDF1 and YTHDF3 in embryonic stem cell-derived cardiomyocyte differentiation.

Authors:  Shen Wang; Jun Zhang; Xiang Wu; Xianrong Lin; Xiao-Min Liu; Jun Zhou
Journal:  RNA Biol       Date:  2020-12-09       Impact factor: 4.652

6.  m6A RNA Immunoprecipitation Followed by High-Throughput Sequencing to Map N6-Methyladenosine.

Authors:  Devi Prasad Bhattarai; Francesca Aguilo
Journal:  Methods Mol Biol       Date:  2022

Review 7.  A mark of disease: how mRNA modifications shape genetic and acquired pathologies.

Authors:  Eliana Destefanis; Gülben Avşar; Paula Groza; Antonia Romitelli; Serena Torrini; Pınar Pir; Silvestro G Conticello; Francesca Aguilo; Erik Dassi
Journal:  RNA       Date:  2020-12-29       Impact factor: 4.942

Review 8.  Structural Insights into N6-methyladenosine (m6A) Modification in the Transcriptome.

Authors:  Jinbo Huang; Ping Yin
Journal:  Genomics Proteomics Bioinformatics       Date:  2018-04-27       Impact factor: 7.691

Review 9.  Above the Epitranscriptome: RNA Modifications and Stem Cell Identity.

Authors:  Francesco Morena; Chiara Argentati; Martina Bazzucchi; Carla Emiliani; Sabata Martino
Journal:  Genes (Basel)       Date:  2018-06-28       Impact factor: 4.096

Review 10.  Significant epitranscriptomes in heterogeneous cancer.

Authors:  Masamitsu Konno; Masateru Taniguchi; Hideshi Ishii
Journal:  Cancer Sci       Date:  2019-08       Impact factor: 6.716

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