| Literature DB >> 28626722 |
Mukesh Kumar1,2, Shiny Rana1, Vikas Beniwal3, Raj Kumar Salar2.
Abstract
A novel tannase producing bacterial strain was isolated from rhizospheric soil of Acacia species and identified as Klebsiella pneumoniae KP715242. A 3.25-fold increase in tannase production was achieved upon optimization with central composite design using response surface methodology. Four variables namely pH, temperature, incubation period, and agitation speed were used to optimize significant correlation between the effects of these variables on tannase production. A second-order polynomial was fitted to data and validated by ANOVA. The results showed a complex relationship between variables and response given that all factors were significant and could explain 99.6% of the total variation. The maximum production was obtained at 5.2 pH, 34.97 °C temperature, 103.34 rpm agitation speed and 91.34 h of incubation time. The experimental values were in good agreement with the predicted ones and the models were highly significant with a correlation coefficient (R2) of 0.99 and a highly significant F-value of 319.37.Entities:
Keywords: Central composite design; Klebsiella pneumoniae; Response surface methodology; Tannase; Tannic acid
Year: 2015 PMID: 28626722 PMCID: PMC5466051 DOI: 10.1016/j.btre.2015.06.002
Source DB: PubMed Journal: Biotechnol Rep (Amst) ISSN: 2215-017X
Experimental range and levels of physical parameters (independent variables).
| independent variables | Range and levels | ||||
|---|---|---|---|---|---|
| −α | −1 | 0 | +1 | +α | |
| pH (X1) | 2.5 | 4.0 | 5.5 | 7.0 | 8.5 |
| Incubation temperature (X2) (°C) | 12.5 | 25 | 37.5 | 50 | 62.5 |
| Incubation time (X3) (h) | 12 | 24 | 48 | 84 | 120 |
| Agitation speed (X4) (rpm) | 0 | 50 | 100 | 150 | 200 |
Central composite design of the variables with tannase activity as response.
| Run | pH | Incubation (h) | Temp (°C) | RPM | Actual value | Predicted value |
|---|---|---|---|---|---|---|
| 1 | 0 | 2 | 0 | 0 | 0.022 | 0.021 |
| 2 | 0 | 0 | 0 | 0 | 0.013 | 0.012 |
| 3 | −1 | 1 | 1 | 1 | 0.039 | 0.040 |
| 4 | 1 | 1 | 1 | 1 | 0.030 | 0.028 |
| 5 | 1 | −1 | 1 | −1 | 0.019 | 0.018 |
| 6 | 0 | 0 | 0 | 2 | 0.011 | 0.011 |
| 7 | 0 | 0 | 0 | 0 | 0.019 | 0.020 |
| 8 | −1 | 1 | −1 | 1 | 0.009 | 0.009 |
| 9 | 0 | −2 | 0 | 0 | 0.021 | 0.021 |
| 10 | −1 | 1 | −1 | −1 | 0.019 | 0.018 |
| 11 | 1 | 1 | −1 | 1 | 0.039 | 0.039 |
| 12 | −2 | 0 | 0 | 0 | 0.030 | 0.031 |
| 13 | −1 | −1 | 1 | −1 | 0.018 | 0.020 |
| 14 | −1 | −1 | 1 | 1 | 0.019 | 0.018 |
| 15 | 1 | −1 | −1 | 1 | 0.019 | 0.020 |
| 16 | 2 | 0 | 0 | 0 | 0.012 | 0.013 |
| 17 | −1 | −1 | −1 | −1 | 0.031 | 0.030 |
| 18 | 0 | 0 | 0 | 0 | 0.013 | 0.015 |
| 19 | 0 | 0 | 0 | −2 | 0.005 | 0.006 |
| 20 | 1 | 1 | 1 | −1 | 0.021 | 0.021 |
| 21 | 0 | 0 | 0 | 0 | 0.017 | 0.019 |
| 22 | 0 | 0 | −2 | 0 | 0.001 | 0.001 |
| 23 | 0 | 0 | 0 | 0 | 0.036 | 0.038 |
| 24 | 0 | 0 | 2 | 0 | 0.045 | 0.043 |
| 25 | 1 | 1 | −1 | −1 | 0.065 | 0.064 |
| 26 | 1 | −1 | −1 | −1 | 0.063 | 0.064 |
| 27 | −1 | 1 | 1 | −1 | 0.064 | 0.064 |
| 28 | −1 | −1 | −1 | 1 | 0.064 | 0.064 |
| 29 | 0 | 0 | 0 | 0 | 0.063 | 0.064 |
| 30 | 1 | −1 | 1 | 1 | 0.065 | 0.064 |
Results of biochemical tests Biochemical tests for the isolate TAH10.
| Characterization | |
|---|---|
| Configuration | Round |
| Elevation | Raised |
| Surface | Smooth |
| Cell Shape | Rods |
| Arrangement | Occurring singly |
| Spore(s) | − |
| Motility | − |
| Indole test | + |
| Lactose | + |
| Citrate | + |
| Oxidase | − |
| Catalase | + |
Sequence producing significant alignments (BLAST).
| Accession | Description | Max score | Total score | Query coverage | Max ident | |
|---|---|---|---|---|---|---|
| 2608 | 2608 | 100% | 0.0 | 99% | ||
| 2608 | 2608 | 100% | 0.0 | 99% | ||
| 2603 | 2603 | 100% | 0.0 | 99% | ||
| 2597 | 2597 | 100% | 0.0 | 99% | ||
| 2597 | 2597 | 100% | 0.0 | 99% | ||
| 2597 | 2597 | 100% | 0.0 | 99% | ||
| 2597 | 2597 | 100% | 0.0 | 99% | ||
| 2597 | 2597 | 100% | 0.0 | 99% | ||
| 2597 | 2597 | 100% | 0.0 | 99% | ||
| 2597 | 2597 | 100% | 0.0 | 99% | ||
| 2593 | 2593 | 100% | 0.0 | 99% | ||
| 2591 | 2591 | 100% | 0.0 | 99% | ||
| 2591 | 2591 | 100% | 0.0 | 99% | ||
| 2591 | 2591 | 100% | 0.0 | 99% | ||
| 2591 | 2591 | 100% | 0.0 | 99% |
Fig. 1Neighbour-joining tree showing the position of isolate Klebsiella pneumoniae (GenBank Accession Number KP715242) shown as sample.
ANOVA (analysis of variance) for response surface quadratic model for optimization of tannase production of Klebsiella pneumoniae (GenBank Accession number KP715242).
| Source | Sum of Squares | df | Mean Square | |||
|---|---|---|---|---|---|---|
| Model | 0.011707 | 14 | 0.000836 | 319.3724 | <0.0001 | Significant |
| A—pH | 0.000339 | 1 | 0.000339 | 129.3078 | <0.0001 | |
| B—Incubation Time | 0.000338 | 1 | 0.000338 | 128.9218 | <0.0001 | |
| C—Temperature | 0.000589 | 1 | 0.000589 | 224.9014 | <0.0001 | |
| D—Agitation | 4.26E-05 | 1 | 4.26E-05 | 16.27803 | 0.0011 | |
| AB | 1.91E-05 | 1 | 1.91E-05 | 7.30829 | 0.0163 | |
| AC | 1.23E-06 | 1 | 1.23E-06 | 0.470142 | 0.5034 | |
| AD | 2.12E-05 | 1 | 2.12E-05 | 8.080501 | 0.0123 | |
| BC | 0.000314 | 1 | 0.000314 | 119.9768 | <0.0001 | |
| BD | 4.22E-06 | 1 | 4.22E-06 | 1.612841 | 0.2234 | |
| CD | 3.22E-06 | 1 | 3.22E-06 | 1.228438 | 0.2852 | |
| A2 | 0.003012 | 1 | 0.003012 | 1150.393 | <0.0001 | |
| B2 | 0.004463 | 1 | 0.004463 | 1704.576 | <0.0001 | |
| C2 | 0.005234 | 1 | 0.005234 | 1999.026 | <0.0001 | |
| D2 | 0.000948 | 1 | 0.000948 | 361.9857 | <0.0001 | |
| Residual | 3.93E-05 | 15 | 2.62E-06 | |||
| Lack of fit | 3.51E-05 | 10 | 3.51E-06 | 4.161693 | 0.0645 | Not significant |
| Pure error | 4.21E-06 | 5 | 8.43E-07 | |||
| Cor total | 0.011746 | 29 |
Statistical analysis for tannase production.
| Model terms | Values |
|---|---|
| Std. Dev. | 0.001618 |
| Mean | 0.029773 |
| C.V.% | 5.434793 |
| PRESS | 0.000208 |
| 0.996656 | |
| Adj | 0.993536 |
| Pred | 0.98229 |
| Adeq precision | 56.95118 |
Fig. 2(a) Effect of pH and incubation time on the production of tannase keeping temperature and agitation rate at zero level (coded), (b) effect of pH and temperature on the production of tannase. Time and agitation rate were held at zero level (coded), (c) effect of pH and agitation speed on the production of tannase. Other variables pH and temperature were kept at zero level (coded), (d) effect of incubation time and temperature on the production of tannase keeping pH and agitation rate at zero level (coded), (e) effect of agitation speed and incubation time on the production of tannase. Other variables pH and temperature were held at zero level (coded) and (f) effect of agitation rate and temperature on the production of tannase. Other variables pH and incubation time were held at zero level (coded).