Literature DB >> 28577904

Merging computational fluid dynamics and 4D Flow MRI using proper orthogonal decomposition and ridge regression.

Ali Bakhshinejad1, Ahmadreza Baghaie2, Alireza Vali3, David Saloner4, Vitaliy L Rayz2, Roshan M D'Souza5.   

Abstract

Time resolved phase-contrast magnetic resonance imaging 4D-PCMR (also called 4D Flow MRI) data while capable of non-invasively measuring blood velocities, can be affected by acquisition noise, flow artifacts, and resolution limits. In this paper, we present a novel method for merging 4D Flow MRI with computational fluid dynamics (CFD) to address these limitations and to reconstruct de-noised, divergence-free high-resolution flow-fields. Proper orthogonal decomposition (POD) is used to construct the orthonormal basis of the local sampling of the space of all possible solutions to the flow equations both at the low-resolution level of the 4D Flow MRI grid and the high-level resolution of the CFD mesh. Low-resolution, de-noised flow is obtained by projecting in vivo 4D Flow MRI data onto the low-resolution basis vectors. Ridge regression is then used to reconstruct high-resolution de-noised divergence-free solution. The effects of 4D Flow MRI grid resolution, and noise levels on the resulting velocity fields are further investigated. A numerical phantom of the flow through a cerebral aneurysm was used to compare the results obtained using the POD method with those obtained with the state-of-the-art de-noising methods. At the 4D Flow MRI grid resolution, the POD method was shown to preserve the small flow structures better than the other methods, while eliminating noise. Furthermore, the method was shown to successfully reconstruct details at the CFD mesh resolution not discernible at the 4D Flow MRI grid resolution. This method will improve the accuracy of the clinically relevant flow-derived parameters, such as pressure gradients and wall shear stresses, computed from in vivo 4D Flow MRI data.
Copyright © 2017 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  4D Flow MRI; 4D-PCMR; Computational fluid dynamic; Flow reconstruction; POD; Proper orthogonal decomposition

Mesh:

Year:  2017        PMID: 28577904      PMCID: PMC5527690          DOI: 10.1016/j.jbiomech.2017.05.004

Source DB:  PubMed          Journal:  J Biomech        ISSN: 0021-9290            Impact factor:   2.712


  31 in total

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