Literature DB >> 35320090

Physics-Informed Neural Networks for Brain Hemodynamic Predictions Using Medical Imaging.

Mohammad Sarabian, Hessam Babaee, Kaveh Laksari.   

Abstract

Determining brain hemodynamics plays a critical role in the diagnosis and treatment of various cerebrovascular diseases. In this work, we put forth a physics-informed deep learning framework that augments sparse clinical measurements with one-dimensional (1D) reduced-order model (ROM) simulations to generate physically consistent brain hemodynamic parameters with high spatiotemporal resolution. Transcranial Doppler (TCD) ultrasound is one of the most common techniques in the current clinical workflow that enables noninvasive and instantaneous evaluation of blood flow velocity within the cerebral arteries. However, it is spatially limited to only a handful of locations across the cerebrovasculature due to the constrained accessibility through the skull's acoustic windows. Our deep learning framework uses in vivo real-time TCD velocity measurements at several locations in the brain combined with baseline vessel cross-sectional areas acquired from 3D angiography images and provides high-resolution maps of velocity, area, and pressure in the entire brain vasculature. We validate the predictions of our model against in vivo velocity measurements obtained via four-dimensional (4D) flow magnetic resonance imaging (MRI) scans. We then showcase the clinical significance of this technique in diagnosing cerebral vasospasm (CVS) by successfully predicting the changes in vasospastic local vessel diameters based on corresponding sparse velocity measurements. We show this capability by generating synthetic blood flow data after cerebral vasospasm at various levels of stenosis. Here, we demonstrate that the physics-based deep learning approach can estimate and quantify the subject-specific cerebral hemodynamic variables with high accuracy despite lacking knowledge of inlet and outlet boundary conditions, which is a significant limitation for the accuracy of the conventional purely physics-based computational models.

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Year:  2022        PMID: 35320090      PMCID: PMC9437127          DOI: 10.1109/TMI.2022.3161653

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   11.037


  43 in total

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3.  Hidden fluid mechanics: Learning velocity and pressure fields from flow visualizations.

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4.  THRIVE score predicts outcomes with a third-generation endovascular stroke treatment device in the TREVO-2 trial.

Authors:  Alexander C Flint; Bin Xiang; Rishi Gupta; Raul G Nogueira; Helmi L Lutsep; Tudor G Jovin; Gregory W Albers; David S Liebeskind; Nerses Sanossian; Wade S Smith
Journal:  Stroke       Date:  2013-09-26       Impact factor: 7.914

5.  An efficient full space-time discretization method for subject-specific hemodynamic simulations of cerebral arterial blood flow with distensible wall mechanics.

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Journal:  Stroke       Date:  2001-10       Impact factor: 7.914

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Journal:  Neurol Res       Date:  2009-03       Impact factor: 2.448

8.  Cerebral vasospasm diagnosis by means of angiography and blood velocity measurements.

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9.  Sensitivity and specificity of transcranial Doppler ultrasonography in the diagnosis of vasospasm following subarachnoid hemorrhage.

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10.  Pulse wave propagation in a model human arterial network: Assessment of 1-D visco-elastic simulations against in vitro measurements.

Authors:  Jordi Alastruey; Ashraf W Khir; Koen S Matthys; Patrick Segers; Spencer J Sherwin; Pascal R Verdonck; Kim H Parker; Joaquim Peiró
Journal:  J Biomech       Date:  2011-07-02       Impact factor: 2.712

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  1 in total

1.  Investigating molecular transport in the human brain from MRI with physics-informed neural networks.

Authors:  Bastian Zapf; Johannes Haubner; Miroslav Kuchta; Geir Ringstad; Per Kristian Eide; Kent-Andre Mardal
Journal:  Sci Rep       Date:  2022-09-14       Impact factor: 4.996

  1 in total

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