Literature DB >> 28543988

Absolute Minimal Sampling of Homonuclear 2D NMR TOCSY Spectra for High-Throughput Applications of Complex Mixtures.

Alexandar L Hansen1, Dawei Li1, Cheng Wang2, Rafael Brüschweiler1,2,3.   

Abstract

Modern applications of 2D NMR spectroscopy to diagnostic screening, metabolomics, quality control, and other high-throughput applications are often limited by the time-consuming sampling requirements along the indirect time domain t1 . 2D total correlation spectroscopy (TOCSY) provides unique spin connectivity information for the analysis of a large number of compounds in complex mixtures, but standard methods typically require >100 t1 increments for an accurate spectral reconstruction, rendering these experiments ineffective for high-throughput applications. For a complex metabolite mixture it is demonstrated that absolute minimal sampling (AMS), based on direct fitting of resonance frequencies and amplitudes in the time domain, yields an accurate spectral reconstruction of TOCSY spectra using as few as 16 t1 points. This permits the rapid collection of homonuclear 2D NMR experiments at high resolution with measurement times that previously were only the realm of 1D experiments.
© 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  absolute minimal sampling; complex mixture analysis; metabolomics; total correlation NMR spectroscopy

Mesh:

Substances:

Year:  2017        PMID: 28543988      PMCID: PMC5663451          DOI: 10.1002/anie.201703587

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  14 in total

1.  Non-uniform sampling: post-Fourier era of NMR data collection and processing.

Authors:  Krzysztof Kazimierczuk; Vladislav Orekhov
Journal:  Magn Reson Chem       Date:  2015-08-20       Impact factor: 2.447

2.  Enhanced covariance spectroscopy from minimal datasets.

Authors:  Yanbin Chen; Fengli Zhang; Wolfgang Bermel; Rafael Brüschweiler
Journal:  J Am Chem Soc       Date:  2006-12-13       Impact factor: 15.419

3.  CRAFT (complete reduction to amplitude frequency table)--robust and time-efficient Bayesian approach for quantitative mixture analysis by NMR.

Authors:  Krish Krishnamurthy
Journal:  Magn Reson Chem       Date:  2013-10-24       Impact factor: 2.447

Review 4.  Two-dimensional J-resolved NMR spectroscopy: review of a key methodology in the metabolomics toolbox.

Authors:  Christian Ludwig; Mark R Viant
Journal:  Phytochem Anal       Date:  2010 Jan-Feb       Impact factor: 3.373

5.  Nonuniform sampling and maximum entropy reconstruction in multidimensional NMR.

Authors:  Jeffrey C Hoch; Mark W Maciejewski; Mehdi Mobli; Adam D Schuyler; Alan S Stern
Journal:  Acc Chem Res       Date:  2014-01-09       Impact factor: 22.384

6.  Absolute Minimal Sampling in High-Dimensional NMR Spectroscopy.

Authors:  Alexandar L Hansen; Rafael Brüschweiler
Journal:  Angew Chem Int Ed Engl       Date:  2016-10-10       Impact factor: 15.336

Review 7.  Perspectives in magnetic resonance: NMR in the post-FFT era.

Authors:  Sven G Hyberts; Haribabu Arthanari; Scott A Robson; Gerhard Wagner
Journal:  J Magn Reson       Date:  2014-04       Impact factor: 2.229

Review 8.  Multidimensional approaches to NMR-based metabolomics.

Authors:  Kerem Bingol; Rafael Brüschweiler
Journal:  Anal Chem       Date:  2013-11-22       Impact factor: 6.986

9.  Metabolic profiling, metabolomic and metabonomic procedures for NMR spectroscopy of urine, plasma, serum and tissue extracts.

Authors:  Olaf Beckonert; Hector C Keun; Timothy M D Ebbels; Jacob Bundy; Elaine Holmes; John C Lindon; Jeremy K Nicholson
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

Review 10.  Ultrafast 2D NMR: an emerging tool in analytical spectroscopy.

Authors:  Patrick Giraudeau; Lucio Frydman
Journal:  Annu Rev Anal Chem (Palo Alto Calif)       Date:  2014       Impact factor: 10.745

View more
  4 in total

1.  Real-Time Pure Shift HSQC NMR for Untargeted Metabolomics.

Authors:  István Timári; Cheng Wang; Alexandar L Hansen; Gilson Costa Dos Santos; Sung Ok Yoon; Lei Bruschweiler-Li; Rafael Brüschweiler
Journal:  Anal Chem       Date:  2019-01-16       Impact factor: 6.986

2.  Fundamental and practical aspects of machine learning for the peak picking of biomolecular NMR spectra.

Authors:  Da-Wei Li; Alexandar L Hansen; Lei Bruschweiler-Li; Chunhua Yuan; Rafael Brüschweiler
Journal:  J Biomol NMR       Date:  2022-04-07       Impact factor: 2.582

3.  XLSY: Extra-Large NMR Spectroscopy.

Authors:  Yulia Pustovalova; Maxim Mayzel; Vladislav Yu Orekhov
Journal:  Angew Chem Int Ed Engl       Date:  2018-10-01       Impact factor: 15.336

4.  A framework for tracer-based metabolism in mammalian cells by NMR.

Authors:  Raquel Saborano; Zuhal Eraslan; Jennie Roberts; Farhat L Khanim; Patricia F Lalor; Michelle A C Reed; Ulrich L Günther
Journal:  Sci Rep       Date:  2019-02-21       Impact factor: 4.379

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.