| Literature DB >> 28428850 |
Abstract
Biodiversity research is often impeded by the time and resources required to identify species. One possible solution is to use higher taxa to predict species richness and community composition. However, previous studies have shown that the performance of higher taxa as surrogates for species is highly variable, making it difficult to predict whether the method will be reliable for a particular objective. Using 8 independent datasets, I tested whether higher taxa accurately characterize the responses of beetle and ant communities to environmental drivers. For each dataset, ordinations were carried out using species and higher taxa, and the two compared using the Procrustes m² statistic (a scale-independent variant of Procrustes sum of squares). I then modelled the relationship between five hypothesised explanatory variables and 1) Procrustes m², and 2) the coefficient of determination (R²) for the correlation between richness of species and higher taxa. The species to higher taxon ratio, community structure, beta diversity, completeness of sampling, and taxon (beetles or ants) were all significant predictors of m², together explaining 88% of the variance. The only significant predictor of R² was the species to higher taxon ratio, which explained 45% of the variance. When using higher taxa to predict community composition, better performance is expected when the ratio of species to higher taxa is low, in communities with high evenness and high species turnover, and when there is niche conservation within higher taxa. When using higher taxa to predict species richness, effective surrogacy can be expected when the species to higher taxon ratio is very low. When it is not, surrogacy performance may be strongly influenced by stochastic factors, making predictions of performance difficult.Entities:
Keywords: ants; beetles; community composition; higher taxa; niche conservation; species richness; surrogates
Year: 2017 PMID: 28428850 PMCID: PMC5395451 DOI: 10.1002/ece3.2736
Source DB: PubMed Journal: Ecol Evol ISSN: 2045-7758 Impact factor: 2.912
The columns entitled “correspondence between species and higher taxa” show (i) the correlations between DC axes calculated using species and higher taxa, measured as R², (ii) the similarity of DCA ordinations carried out using species and higher taxa (Procrustes m² statistic), and (iii) the correlation between species richness and higher taxa richness (Richness R²). Procrustes m² and Richness R² were subsequently modeled as a function of SHR (the species to higher taxon ratio), D (the proportional abundance of the most abundant species in the dataset, i.e., community evenness), DC1 length (i.e., species turnover), the completeness of species sampling in the dataset (“scaled asymptote”), and taxon (i.e., beetles or ants)
| Dataset | Surrogate | Correspondence between species and higher taxa | Predictors of Procrustes | MRPP test | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| DC1 | DC2 R² | DC3 R² | DC4 R² | Procrustes | Richness | SHR |
| DC1 axis length | Scaled asymptote | Taxon |
|
| ||
| Borneo (y1) | Genera | .99 | .02 | ‐ | ‐ | 0.39 | .99 | 1.93 | 0.07 | 10.25 | 0.15 | Beetles | 0.11 |
|
| Families | .97 | .13 | .02 | ‐ | 0.30 | .87 | 8.23 | 0.02 |
| |||||
| Borneo (y2) | Families | .99 | .38 | .34 | ‐ | 0.17 | .91 | 13.29 | 0.04 | 6.54 | 0.14 | 0.02 |
| |
| Chile | Genera | .98 | .01 | .06 | .20 | 0.17 | .97 | 1.15 | 0.16 | 5.10 | 0.04 | Beetles | 0.01 | .30 |
| Families | .90 | .03 | .00 | .04 | 0.31 | .55 | 4.13 | −0.02 | .68 | |||||
| UK | Genera | .95 | .27 | .01 | .07 | 0.36 | .97 | 1.45 | 0.74 | 2.00 | 0.04 | Beetles | 0.01 |
|
| Families | .78 | .19 | .01 | .11 | 0.39 | .09 | 6.27 | 0.01 |
| |||||
| Belize | Genera | .05 | .01 | .00 | .04 | 0.74 | .87 | 2.90 | 0.30 | 5.36 | 0.00 | Ants | 0.02 | .13 |
| Families | .00 | .04 | .04 | .00 | 0.89 | .51 | 10.50 | 0.00 | .46 | |||||
| Cameroon | Genera | .55 | .10 | .05 | .70 | 0.61 | .61 | 3.36 | 0.18 | 2.03 | 0.05 | Ants | −0.01 | .59 |
| Families | .00 | .05 | .01 | .14 | 0.64 | .31 | 13.88 | 0.01 | .14 | |||||
| Gabon | Genera | .00 | .11 | .02 | .03 | 0.77 | .64 | 3.33 | 0.24 | 5.46 | 0.01 | Ants | 0.03 | .14 |
| Families | .05 | .06 | .00 | .02 | 0.95 | .03 | 12.50 | 0.01 | .11 | |||||
| Ghana | Genera | .62 | .05 | .01 | .01 | 0.63 | .81 | 4.07 | 0.15 | 3.13 | 0.01 | Ants | 0.00 | .41 |
| Families | .10 | .00 | .00 | .00 | 0.81 | .38 | 20.78 | 0.01 | .12 | |||||
| Malaysia | Genera | .43 | .08 | .25 | .00 | 0.65 | .91 | 2.85 | 0.20 | 4.75 | 0.00 | Ants | 0.01 | .21 |
| Families | .03 | .01 | .00 | .02 | 0.90 | .41 | 13.88 | 0.01 | .12 | |||||
The final two columns refer to the MRPP test: A is an estimate of the proportion of the dissimilarities explained by group identity, and p is the significance value of the test. Significant (p < 0.05 and close to significant results (p < 0.1) are highlighted in bold.
Figure 1Example ordination plots generated using species and higher taxa. Top panel: beetles from a forest in the UK. One sample per month was taken throughout the year. To aid interpretation, the samples are colored from red to blue according to temporal similarity. Middle panel: beetles sampled from temperate forest habitats in Chile. Bottom panel: ants sampled from forested habitats and a coconut plantation in Ghana
Coefficients and associated likelihood ratio tests for models predicting (i) the correlation between species richness and richness of higher taxa (Richness R²) and (ii) the similarity between ordinations conducted using species and higher taxa (Procrustes m²) as functions of SHR (the species to higher taxon ratio), D (i.e., community evenness), DC1 length (i.e., species turnover), the completeness of species sampling in the dataset (“scaled asymptote”), and taxon (i.e., beetles or ants)
| Response | Predictor | Coefficient ± standard error | χ² | Significance | Marginal |
|---|---|---|---|---|---|
| Richness | SHR | −1.2 ± 0.38 | 7.72 |
| .45 |
|
| −0.55 ± 0.5 | 1.15 | ns | ||
| DC1 axis length | 0.03 ± 0.52 | 0.00 | ns | ||
| Scaled asymptote | 0.51 ± 0.64 | 0.63 | ns | ||
| Taxon beetles | 0.55 ± 1.16 | 0.22 | ns | ||
| Procrustes | SHR | 0.4 ± 0.11 | 10.43 |
| .88 |
|
| 0.55 ± 0.14 | 10.90 |
| ||
| DC1 axis length | 0.72 ± 0.14 | 14.62 |
| ||
| Scaled asymptote | −0.39 ± 0.18 | 4.19 |
| ||
| Taxon beetles | −2.14 ± 0.32 | 18.66 |
|