| Literature DB >> 28423566 |
Saber Imani1,2, Xianqin Zhang1, Hossein Hosseinifard3, Shangyi Fu4, Junjiang Fu1.
Abstract
BACKGROUND: MicroRNA-34a (miR-34a) is a master regulator of tumor suppression in breast cancer (BC). This systematic review aims to analyze the diagnostic accuracy of miR-34a in the detection of BC as a biomarker.Entities:
Keywords: biomarker; breast cancer; diagnostics; meta-analysis; microRNA-34a
Mesh:
Substances:
Year: 2017 PMID: 28423566 PMCID: PMC5410295 DOI: 10.18632/oncotarget.15520
Source DB: PubMed Journal: Oncotarget ISSN: 1949-2553
Figure 1Flow chart of the study selection in the meta-analysis
Main characteristic of the included studies in this meta-analysis
| Author (Ref.) | Year | Country | Ethnicity | BC type | Sample type | Sample size | Age | Diagnostic power | Cancer grade | Cut-off value | Genotyping method | Meas. type | Ref. control | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Case | Cont. | < 50 | > 50 | TP | FP | FN | TN | |||||||||||
| Sanjay Mishra [ | 2015 | India | Caucasian | Non-IBC | Plasma | 45 | 45 | NR | NR | NR | NR | NR | NR | ІІ/ІІІ | 0.12 | qRT-PCR | TaqMan | U6 |
| Corinna Eichelser [ | 2013 | Germany | Caucasian | Non-IBC | Serum | 120 | 40 | 0 | 120 | NR | NR | NR | NR | І/ІІ | 1.02 | qRT-PCR | TaqMan | miR-16 |
| IBC | 32 | 40 | 0 | 32 | NR | NR | NR | NR | ІІ/ІІІ | 4.5 | ||||||||
| Seema | 2015 | USA | Caucasian | IBC | Tissue | 407 | 54 | 127 | 334 | 354 | 15 | 53 | 39 | І/ІІ | NR | In situ hyb. | NR | NR |
| USA | 242 | 37 | 94 | 185 | 201 | 9 | 41 | 28 | ||||||||||
| Poland | 705 | 90 | 270 | 525 | 672 | 26 | 33 | 64 | ||||||||||
| Thalia Erbes [ | 2015 | Germany | Caucasian | Non-IBC | Serum | 24 | 24 | 24 | 24 | 19 | 6 | 5 | 18 | І/ІІ | 0.63 | qRT-PCR | TaqMan | miR-16 |
| Khan M.A. [ | 2016 | China | Asian | IBC | Tissue | 33 | 15 | 17 | 27 | 27 | 5 | 6 | 10 | ІІ/ІІІ | 0.22 | qRT-PCR | TaqMan | U6 |
| Imen Medimegh [ | 2014 | Tunis | Caucasian | Non-IBC | Tissue | 60 | 60 | 32 | 38 | 51 | 12 | 9 | 48 | ІІ/ІІІ | 1.45 | qRT-PCR | SYBR | U6 |
| Mei YiWu [ | 2014 | China | Asian | Non-IBC | Tissue | 42 | 18 | NR | NR | 33 | 7 | 9 | 11 | ІІ/ІІІ | 0.18 | qRT-PCR | TaqMan | U6 |
| Hanna Peurala [ | 2011 | Finland | Caucasian | IBC | Tissue | 59 | 13 | 406 | 766 | 46 | 4 | 13 | 9 | ІІ/ІІІ | 0.63 | In situ hyb. | NR | NR |
| Carina Roth [ | 2010 | Germany | Caucasian | Non-IBC | Serum | 59 | 29 | NR | NR | 41 | 8 | 18 | 21 | І/ІІ | 1.02 | qRT-PCR | TaqMan | NR |
| IBC | 30 | 29 | NR | NR | 19 | 8 | 11 | 21 | ІІ/ІІІ | 4.5 | ||||||||
Abbreviations: BC, breast cancer; IBC, invasive breast cancer; Non-IBC, non- invasive breast cancer; TP, true positive; FP, false positive; FN, false negative; TN, true negative; In situ hyb., in situ hybridization; qRT-PCR, quantitative real-time reverse transcription PCR; Meas., measurement; Ref., reference; U6, human U6 snRNA housekeeping small RNA controls; NR, not reported. All tissue samples are formalin-fixed, paraffin-embedded. “NR” parameters for the measurements type and reference control were considered as other categories. The fold changes in miR-34a expression were calculated using the 22−ΔΔCt method. UD, unpublished data. Malignant tumors classified according the tumor-node-metastasis (TNM) stage.
Figure 2The QUADAS score, risk of bias and applicability concerns graph for quality assessment
Meta-analysis results for the expression of miR-34a and breast cancer risk
| No. of studies | Sample size (cases/controls) | x2 | I2 (%) | Pooling Model | Pooled | OR (95%CI) | ||
|---|---|---|---|---|---|---|---|---|
| 13 | 1858/495 | 166.79 | 92.80 | R | 85.5 | 83.80–87.00% | 0.001 | |
| 13 | 1858/495 | 34.03 | 64.70 | R | 70.00 | 65.80–74.10% | 0.007 | |
| 13 | 1858/495 | 48.49 | 75.30 | R | 2.58 | 1.94–3.44 | 0.001 | |
| 13 | 1858/495 | 118.81 | 89.91 | R | 0.29 | 0.19–0.43 | 0.001 | |
| 13 | 1858/495 | 49.90 | 76.00 | R | 9.39 | 5.47–16.11 | 0.002 |
Abbreviations: OR, odds ratio; CI, confidence interval; PLR, positive likelihood ratio; NLR, negative likelihood ratio; DOR, diagnostic odds ratio; x2, chi-squared; R, randomize model.
Figure 3Forest plots of pooled sensitivity (A), specificity (B), negative likelihood ratio (C), positive likelihood ratio (D), diagnostic odds ratio (E) and summary receiver operating characteristic (SROC) curve (F) for miR-34a in the diagnosis of breast cancer.
Subgroup analyses of the included studies
| Subgroup analyses | No. | Sensitivity | Specificity | PLR | NLR | DOR | AUC | PAUC | |
|---|---|---|---|---|---|---|---|---|---|
| Ethnicity | Asian | 2 (75) | 0.800 | 0.636 | 2.184 | 0.316 | 6.970 | - | - |
| Caucasian | 11 (1783) | 0.857 | 0.705 | 2.655 | 0.286 | 9.754 | 0.804 | 0.879 | |
| Cancer type | Non-IBC | 6 (350) | 0.689 | 0.755 | 2.768 | 0.394 | 7.227 | 0.758 | 0.784 |
| IBC | 7 (1508) | 0.893 | 0.658 | 2.486 | 0.230 | 11.421 | 0.808 | 0.886 | |
| Sample type | Tissue | 7 (1548) | 0.894 | 0.728 | 3.123 | 0.197 | 16.304 | 0.738 | 0.678 |
| Serum | 5 (265) | 0.675 | 0.630 | 2.135 | 0.478 | 5.070 | 0.737 | 0.766 | |
| Plasma | 1 (45) | - | - | - | - | - | - | - | |
| Sample size | < = 100 | 9 (384) | 0.735 | 0.643 | 2.168 | 0.430 | 5.649 | 0.759 | 0.787 |
| > 100 | 4 (1474) | 0.880 | 0.744 | 3.266 | 0.194 | 17.149 | 0.778 | 0.720 | |
| Genotyping method | In situ hyb. | 4 (1413) | 0.901 | 0.722 | 3.205 | 0.167 | 20.141 | 0.750 | 0.816 |
| qRT-PCR | 9 (445) | 0.708 | 0.687 | 2.370 | 0.404 | 6.429 | 0.771 | 0.798 | |
| Ref. control | miR-16 | 3 (176) | 0.676 | 0.577 | 2.025 | 0.455 | 4.953 | 0.738 | 0.772 |
| U6 | 4 (180) | 0.756 | 0.754 | 2.789 | 0.330 | 8.555 | 0.782 | 0.820 | |
| other | 6 (1502) | 0.887 | 0.722 | 3.023 | 0.233 | 12.922 | 0.733 | 0.656 | |
| Meas. type | Taqman | 8 (385) | 0.686 | 0.658 | 2.162 | 0.476 | 5.224 | 0.744 | 0.774 |
| SYBR | 1 (60) | - | - | - | - | - | - | - | |
| NR | 4 (1413) | - | - | - | - | - | - | - | |
| Grade | I/II | 6 (1557) | 0.873 | 0.730 | 3.053 | 0.233 | 13.136 | 0.752 | 0.778 |
| II/III | 7 (301) | 0.761 | 0.664 | 2.292 | 0.368 | 6.763 | 0.782 | 0.804 | |
Abbreviations: IBC, invasive breast cancer; Non-IBC, non- invasive breast cancer; In situ hyb., in situ hybridization; qRT-PCR, quantitative real-time reverse transcription PCR; Meas., measurement; Ref., reference; U6, human U6 snRNA housekeeping small RNA controls; NR, not reported; AUC, area under the curve; PAUC, partial AUC; All study number reported as the number (case number); “NR” parameters for the measurements type and reference control were considered as other categories. The fold changes in miR-34a expression were calculated using the 2−ΔΔCt method. Malignant tumors classified according the tumor-node-metastasis (TNM) stage.
Figure 4Summary receiver operating characteristic curve for miR-34a and subgroup analysis based on specimen types (A), breast cancer type (B), breast cancer grade (C), and sample size (D).
Figure 5Publication bias by Funnel plot analysis
Each point represents a separate study for the indicated association, the vertical axes represent standard error of logarithmic hazard ratio (HR) and horizontal axes represent the HRs limits.