| Literature DB >> 28410408 |
Elder Assis Miranda1,2, Kátia Maria Ferreira1, Airton Torres Carvalho3, Celso Feitosa Martins4, Carlo Rivero Fernandes5, Marco Antonio Del Lama1.
Abstract
Partamona seridoensis is an endemic stingless bee from the Caatinga, a Neotropical dry forest in northeastern Brazil. Like other stingless bees, this species plays an important ecological role as a pollinator. The aim of the present study was to investigate the genetic structure and evolutionary history of P. seridoensis across its current geographic range. Workers from 84 nests from 17 localities were analyzed for COI and Cytb genic regions. The population structure tests (Bayesian phylogenetic inference, AMOVA and haplotype network) consistently characterized two haplogroups (northwestern and eastern), with little gene flow between them, generating a high differentiation between them as well as among the populations within each haplogroup. The Mantel test revealed no isolation by distance. No evidence of a potential geographic barrier in the present that could explain the diversification between the P. seridoensis haplogroups was found. However, Pleistocene climatic changes may explain this differentiation, since the initial time for the P. seridoensis lineages diversification took place during the mid-Pleistocene, specifically the interglacial period, when the biota is presumed to have been more associated with dry conditions and had more restricted, fragmented geographical distribution. This event may have driven diversification by isolating the two haplogroups. Otherwise, the climatic changes in the late Pleistocene must not have drastically affected the population dynamics of P. seridoensis, since the Bayesian Skyline Plot did not reveal any substantial fluctuation in effective population size in either haplogroup. Considering its importance and the fact that it is an endemic bee from a very threatened Neotropical dry forest, the results herein could be useful to the development of conservation strategies for P. seridoensis.Entities:
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Year: 2017 PMID: 28410408 PMCID: PMC5391937 DOI: 10.1371/journal.pone.0175725
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Geographical origin (with coordinates) of the P. seridoensis nests.
N = number of colonies; H = haplotypes found in each locality.
| Localities | Code | Latitude | Longitude | N | H | |
|---|---|---|---|---|---|---|
| 1 | Almas-PB | ALM | -7.4730 | -36.904 | 10 | H1 |
| 2 | Moreiras-PB | MOR | -7.3933 | -36.414 | 10 | H1 |
| 3 | Jardim do Seridó-RN | JSE | -6.5976 | -36.81 | 1 | H7 |
| 4 | Jandaíra-RN | JAN | -5.3508 | -36.487 | 10 | H1 |
| 5 | Matureia-PB | MAT | -7.2623 | -37.351 | 5 | H1 |
| 6 | Serra Branca-PB | SBR | -7.4808 | -36.666 | 3 | H1 |
| 7 | Nova Olinda-PB | NOL | -7.4645 | -38.017 | 1 | H1 |
| 8 | São Domingos do Cariri-PB | SDC | -7.5824 | -36.391 | 1 | H11 |
| 9 | São José do Sabugi-PB | SJS | -6.776 | -36.799 | 2 | H12 |
| 10 | Taperoá-PB | TAP | -7.2216 | -36.846 | 2 | H13 |
| 11 | Santa Luzia-PB | SLU | -6.8718 | -36.921 | 6 | H14 |
| 12 | Baturité-CE | BAT | -4.3292 | -38.881 | 6 | H2 |
| 13 | Chorozinho-CE | CHO | -4.2891 | -38.499 | 8 | H3, H4, H5 |
| 14 | Guaramiranga-CE | GUA | -4.23 | -38.948 | 10 | H6 |
| 15 | Alcântaras-CE | ALC | -3.5588 | -40.5210 | 1 | H8 |
| 16 | Martins-RN | MAR | -6.0635 | -37.937 | 1 | H9 |
| 17 | Mossoró-RN | MOS | -5.1870 | -37.624 | 7 | H10 |
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Fig 1Geographical distribution of Caatinga area is represented by downward diagonal lines and the dotted line represents the geographical distribution of P. seridoensis [9] in A. Bayesian implementations of the Generalized Mixed Yule Coalescent model (bGMYC) for P. seridoensis, shown in B. Two lines represent two mutation steps between haplotypes and no line between haplotypes represents one mutation step in C. Gray color represents northwestern haplogroup and black color represents eastern haplogroup (in all figures).
Genetic diversity of P. seridoensis.
Number of samples (N), number of haplotypes (h), variables sites (S), nucleotide diversity (π) and haplotype diversity (Hd) for concatenated mitochondrial genes COI and Cytb in each haplogroup and all populations.
| Haplogroups | N | h | S | π | Hd |
|---|---|---|---|---|---|
| Eastern | 51 | 6 | 7 | 0.00059 (±0.00017) | 0.405 (±0.082) |
| Northwestern | 33 | 8 | 7 | 0.00159 (±0.00015) | 0.826 (±0.034) |
| 84 | 14 | 16 | 0.00266 (±0.00019) | 0.756(±0.044) |
Fig 2Coalescent Bayesian Skyline Plot (BSP) used to infer demographic history of P. seridoensis population groups.
Black horizontal line shows median BSP estimate and blue area shows upper and lower 95% highest posterior density limits.
Bayes factors and log marginal likelihoods of the four evaluated migration models between northwestern and eastern haplogroups of P. seridoensis.
| Bezier lmL | LBF(Bezier) | Choice(Bezier) | Model probability | |
|---|---|---|---|---|
| Meastern>northwestern | -1446.0564 | 0.0000 | 1 | 0.72582 |
| Mnorthwestern>eastern | -1447.0697 | -2.0266 | 2 | 0.2634 |
| Full | -1450.2751 | -8.4374 | 3 | 0.0106 |
| Panmictic | -1458.5843 | -25.0558 | 4 | 2.63042E-06 |