Literature DB >> 28404790

Forest Soil Bacteria: Diversity, Involvement in Ecosystem Processes, and Response to Global Change.

Salvador Lladó1, Rubén López-Mondéjar1, Petr Baldrian2.   

Abstract

The ecology of forest soils is an important field of research due to the role of forests as carbon sinks. Consequently, a significant amount of information has been accumulated concerning their ecology, especially for temperate and boreal forests. Although most studies have focused on fungi, forest soil bacteria also play important roles in this environment. In forest soils, bacteria inhabit multiple habitats with specific properties, including bulk soil, rhizosphere, litter, and deadwood habitats, where their communities are shaped by nutrient availability and biotic interactions. Bacteria contribute to a range of essential soil processes involved in the cycling of carbon, nitrogen, and phosphorus. They take part in the decomposition of dead plant biomass and are highly important for the decomposition of dead fungal mycelia. In rhizospheres of forest trees, bacteria interact with plant roots and mycorrhizal fungi as commensalists or mycorrhiza helpers. Bacteria also mediate multiple critical steps in the nitrogen cycle, including N fixation. Bacterial communities in forest soils respond to the effects of global change, such as climate warming, increased levels of carbon dioxide, or anthropogenic nitrogen deposition. This response, however, often reflects the specificities of each studied forest ecosystem, and it is still impossible to fully incorporate bacteria into predictive models. The understanding of bacterial ecology in forest soils has advanced dramatically in recent years, but it is still incomplete. The exact extent of the contribution of bacteria to forest ecosystem processes will be recognized only in the future, when the activities of all soil community members are studied simultaneously.
Copyright © 2017 American Society for Microbiology.

Entities:  

Keywords:  bacteria; decomposition; ecosystem processes; forest ecology; global change; litter; nutrient cycling; soil

Mesh:

Substances:

Year:  2017        PMID: 28404790      PMCID: PMC5485800          DOI: 10.1128/MMBR.00063-16

Source DB:  PubMed          Journal:  Microbiol Mol Biol Rev        ISSN: 1092-2172            Impact factor:   11.056


  179 in total

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Journal:  Res Microbiol       Date:  2011-02-22       Impact factor: 3.992

2.  Non-symbiotic Bradyrhizobium ecotypes dominate North American forest soils.

Authors:  David VanInsberghe; Kendra R Maas; Erick Cardenas; Cameron R Strachan; Steven J Hallam; William W Mohn
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3.  Chronic N-amended soils exhibit an altered bacterial community structure in Harvard Forest, MA, USA.

Authors:  Swathi A Turlapati; Rakesh Minocha; Premsai S Bhiravarasa; Louis S Tisa; William K Thomas; Subhash C Minocha
Journal:  FEMS Microbiol Ecol       Date:  2012-10-11       Impact factor: 4.194

4.  Extreme warm temperatures alter forest phenology and productivity in Europe.

Authors:  Richard A Crabbe; Jadu Dash; Victor F Rodriguez-Galiano; Dalibor Janous; Marian Pavelka; Michal V Marek
Journal:  Sci Total Environ       Date:  2016-05-03       Impact factor: 7.963

5.  Spatiotemporal Stability of an Ammonia-Oxidizing Community in a Nitrogen-Saturated Forest Soil.

Authors:  A.M. Laverman; A.G.C.L. Speksnijder; M. Braster; G.A. Kowalchuk; H.A. Verhoef; H.W. Van Verseveld
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6.  Boreal and temperate trees show strong acclimation of respiration to warming.

Authors:  Peter B Reich; Kerrie M Sendall; Artur Stefanski; Xiaorong Wei; Roy L Rich; Rebecca A Montgomery
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7.  Forest response to elevated CO2 is conserved across a broad range of productivity.

Authors:  Richard J Norby; Evan H Delucia; Birgit Gielen; Carlo Calfapietra; Christian P Giardina; John S King; Joanne Ledford; Heather R McCarthy; David J P Moore; Reinhart Ceulemans; Paolo De Angelis; Adrien C Finzi; David F Karnosky; Mark E Kubiske; Martin Lukac; Kurt S Pregitzer; Giuseppe E Scarascia-Mugnozza; William H Schlesinger; Ram Oren
Journal:  Proc Natl Acad Sci U S A       Date:  2005-12-05       Impact factor: 11.205

8.  Elevated atmospheric CO2 affects soil microbial diversity associated with trembling aspen.

Authors:  Celine Lesaulnier; Dimitris Papamichail; Sean McCorkle; Bernard Ollivier; Steven Skiena; Safiyh Taghavi; Donald Zak; Daniel van der Lelie
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9.  Endobacteria in some ectomycorrhiza of Scots pine (Pinus sylvestris).

Authors:  Hironari Izumi; Ian C Anderson; Ian J Alexander; Ken Killham; Edward R B Moore
Journal:  FEMS Microbiol Ecol       Date:  2006-04       Impact factor: 4.194

10.  Community-level physiological profiling analyses show potential to identify the copiotrophic bacteria present in soil environments.

Authors:  Salvador Lladó; Petr Baldrian
Journal:  PLoS One       Date:  2017-02-07       Impact factor: 3.240

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  51 in total

1.  Diversity and Interactomics of Bacterial Communities Associated with Dominant Trees During Tropical Forest Recovery.

Authors:  Angel A Becerra-Lucio; Natalia Y Labrín-Sotomayor; Patricia A Becerra-Lucio; Flor I Trujillo-Elisea; Ana T Chávez-Bárcenas; Salima Machkour-M'Rabet; Yuri J Peña-Ramírez
Journal:  Curr Microbiol       Date:  2021-07-10       Impact factor: 2.188

2.  Structural and Functional Dynamics of Soil Microbes following Spruce Beetle Infestation.

Authors:  Gordon F Custer; Linda T A van Diepen; William L Stump
Journal:  Appl Environ Microbiol       Date:  2020-01-21       Impact factor: 4.792

3.  Succession of Microbial Decomposers Is Determined by Litter Type, but Site Conditions Drive Decomposition Rates.

Authors:  A Buresova; J Kopecky; V Hrdinkova; Z Kamenik; M Omelka; M Sagova-Mareckova
Journal:  Appl Environ Microbiol       Date:  2019-11-27       Impact factor: 4.792

4.  Decomposer food web in a deciduous forest shows high share of generalist microorganisms and importance of microbial biomass recycling.

Authors:  Ruben López-Mondéjar; Vendula Brabcová; Martina Štursová; Anna Davidová; Jan Jansa; Tomaš Cajthaml; Petr Baldrian
Journal:  ISME J       Date:  2018-02-28       Impact factor: 10.302

Review 5.  Function, distribution, and annotation of characterized cellulases, xylanases, and chitinases from CAZy.

Authors:  Stanley T C Nguyen; Hannah L Freund; Joshua Kasanjian; Renaud Berlemont
Journal:  Appl Microbiol Biotechnol       Date:  2018-01-22       Impact factor: 4.813

Review 6.  Multifarious Responses of Forest Soil Microbial Community Toward Climate Change.

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7.  Thermodynamic constraints on the assembly and diversity of microbial ecosystems are different near to and far from equilibrium.

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Journal:  PLoS Comput Biol       Date:  2021-12-03       Impact factor: 4.475

8.  Microbial Decomposer Dynamics: Diversity and Functionality Investigated through a Transplantation Experiment in Boreal Forests.

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Journal:  Microb Ecol       Date:  2018-03-26       Impact factor: 4.552

9.  Cataloguing the bacterial diversity in the active ectomycorrhizal zone of Astraeus from a dry deciduous forest of Shorea.

Authors:  Vineet Vishal; Somnath Singh Munda; Geetanjali Singh; Shalini Lal
Journal:  Biodivers Data J       Date:  2021-05-19

Review 10.  Unboxing the black box-one step forward to understand the soil microbiome: A systematic review.

Authors:  Apurva Mishra; Lal Singh; Dharmesh Singh
Journal:  Microb Ecol       Date:  2022-02-02       Impact factor: 4.552

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