Literature DB >> 28393147

Prediction of Infant MRI Appearance and Anatomical Structure Evolution using Sparse Patch-based Metamorphosis Learning Framework.

Islem Rekik1, Gang Li1, Guorong Wu1, Weili Lin1, Dinggang Shen1.   

Abstract

Magnetic resonance imaging (MRI) of pediatric brain provides invaluable information for early normal and abnormal brain development. Longitudinal neuroimaging has spanned various research works on examining infant brain development patterns. However, studies on predicting postnatal brain image evolution remain scarce, which is very challenging due to the dynamic tissue contrast change and even inversion in postnatal brains. In this paper, we unprecedentedly propose a dual image intensity and anatomical structure (label) prediction framework that nicely links the geodesic image metamorphosis model with sparse patch-based image representation, thereby defining spatiotemporal metamorphic patches encoding both image photometric and geometric deformation. In the training stage, we learn the 4D metamorphosis trajectories for each training subject. In the prediction stage, we define various strategies to sparsely represent each patch in the testing image using the training metamorphosis patches; as we progressively increment the richness of the patch (from appearance-based to multimodal kinetic patches). We used the proposed framework to predict 6, 9 and 12-month brain MR image intensity and structure (white and gray matter maps) from 3 months in 10 infants. Our seminal work showed promising preliminary prediction results for the spatiotemporally complex, drastically changing brain images.

Entities:  

Year:  2016        PMID: 28393147      PMCID: PMC5382995          DOI: 10.1007/978-3-319-28194-0_24

Source DB:  PubMed          Journal:  Patch Based Tech Med Imaging (2015)


  5 in total

1.  Geodesic regression for image time-series.

Authors:  Marc Niethammer; Yang Huang; François-Xavier Vialard
Journal:  Med Image Comput Comput Assist Interv       Date:  2011

2.  Neonatal atlas construction using sparse representation.

Authors:  Feng Shi; Li Wang; Guorong Wu; Gang Li; John H Gilmore; Weili Lin; Dinggang Shen
Journal:  Hum Brain Mapp       Date:  2014-03-17       Impact factor: 5.038

3.  Hierarchical multi-atlas label fusion with multi-scale feature representation and label-specific patch partition.

Authors:  Guorong Wu; Minjeong Kim; Gerard Sanroma; Qian Wang; Brent C Munsell; Dinggang Shen
Journal:  Neuroimage       Date:  2014-11-20       Impact factor: 6.556

4.  Predict brain MR image registration via sparse learning of appearance and transformation.

Authors:  Qian Wang; Minjeong Kim; Yonghong Shi; Guorong Wu; Dinggang Shen
Journal:  Med Image Anal       Date:  2014-11-08       Impact factor: 8.545

5.  A structural MRI study of human brain development from birth to 2 years.

Authors:  Rebecca C Knickmeyer; Sylvain Gouttard; Chaeryon Kang; Dianne Evans; Kathy Wilber; J Keith Smith; Robert M Hamer; Weili Lin; Guido Gerig; John H Gilmore
Journal:  J Neurosci       Date:  2008-11-19       Impact factor: 6.167

  5 in total
  6 in total

Review 1.  Baby brain atlases.

Authors:  Kenichi Oishi; Linda Chang; Hao Huang
Journal:  Neuroimage       Date:  2018-04-03       Impact factor: 6.556

2.  Patch-Based Label Fusion with Structured Discriminant Embedding for Hippocampus Segmentation.

Authors:  Yan Wang; Guangkai Ma; Xi Wu; Jiliu Zhou
Journal:  Neuroinformatics       Date:  2018-10

Review 3.  Computational neuroanatomy of baby brains: A review.

Authors:  Gang Li; Li Wang; Pew-Thian Yap; Fan Wang; Zhengwang Wu; Yu Meng; Pei Dong; Jaeil Kim; Feng Shi; Islem Rekik; Weili Lin; Dinggang Shen
Journal:  Neuroimage       Date:  2018-03-21       Impact factor: 6.556

4.  Deep learning-based simultaneous registration and unsupervised non-correspondence segmentation of medical images with pathologies.

Authors:  Julia Andresen; Timo Kepp; Jan Ehrhardt; Claus von der Burchard; Johann Roider; Heinz Handels
Journal:  Int J Comput Assist Radiol Surg       Date:  2022-03-03       Impact factor: 2.924

5.  Longitudinal Prediction of Infant MR Images With Multi-Contrast Perceptual Adversarial Learning.

Authors:  Liying Peng; Lanfen Lin; Yusen Lin; Yen-Wei Chen; Zhanhao Mo; Roza M Vlasova; Sun Hyung Kim; Alan C Evans; Stephen R Dager; Annette M Estes; Robert C McKinstry; Kelly N Botteron; Guido Gerig; Robert T Schultz; Heather C Hazlett; Joseph Piven; Catherine A Burrows; Rebecca L Grzadzinski; Jessica B Girault; Mark D Shen; Martin A Styner
Journal:  Front Neurosci       Date:  2021-09-09       Impact factor: 5.152

6.  Image registration and appearance adaptation in non-correspondent image regions for new MS lesions detection.

Authors:  Julia Andresen; Hristina Uzunova; Jan Ehrhardt; Timo Kepp; Heinz Handels
Journal:  Front Neurosci       Date:  2022-09-07       Impact factor: 5.152

  6 in total

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