Literature DB >> 28375650

Emerging Frontiers of Neuroengineering: A Network Science of Brain Connectivity.

Danielle S Bassett1,2, Ankit N Khambhati1, Scott T Grafton3,4.   

Abstract

Neuroengineering is faced with unique challenges in repairing or replacing complex neural systems that are composed of many interacting parts. These interactions form intricate patterns over large spatiotemporal scales and produce emergent behaviors that are difficult to predict from individual elements. Network science provides a particularly appropriate framework in which to study and intervene in such systems by treating neural elements (cells, volumes) as nodes in a graph and neural interactions (synapses, white matter tracts) as edges in that graph. Here, we review the emerging discipline of network neuroscience, which uses and develops tools from graph theory to better understand and manipulate neural systems from micro- to macroscales. We present examples of how human brain imaging data are being modeled with network analysis and underscore potential pitfalls. We then highlight current computational and theoretical frontiers and emphasize their utility in informing diagnosis and monitoring, brain-machine interfaces, and brain stimulation. A flexible and rapidly evolving enterprise, network neuroscience provides a set of powerful approaches and fundamental insights that are critical for the neuroengineer's tool kit.

Entities:  

Keywords:  control theory; graph theory; network neuroscience; neuroengineering; neuroimaging

Mesh:

Year:  2017        PMID: 28375650      PMCID: PMC6005206          DOI: 10.1146/annurev-bioeng-071516-044511

Source DB:  PubMed          Journal:  Annu Rev Biomed Eng        ISSN: 1523-9829            Impact factor:   9.590


  171 in total

1.  Community structure in time-dependent, multiscale, and multiplex networks.

Authors:  Peter J Mucha; Thomas Richardson; Kevin Macon; Mason A Porter; Jukka-Pekka Onnela
Journal:  Science       Date:  2010-05-14       Impact factor: 47.728

2.  Resting-state functional connectivity reflects structural connectivity in the default mode network.

Authors:  Michael D Greicius; Kaustubh Supekar; Vinod Menon; Robert F Dougherty
Journal:  Cereb Cortex       Date:  2008-04-09       Impact factor: 5.357

3.  Sparse low-order interaction network underlies a highly correlated and learnable neural population code.

Authors:  Elad Ganmor; Ronen Segev; Elad Schneidman
Journal:  Proc Natl Acad Sci U S A       Date:  2011-05-20       Impact factor: 11.205

Review 4.  Alzheimer's disease: connecting findings from graph theoretical studies of brain networks.

Authors:  Betty M Tijms; Alle Meije Wink; Willem de Haan; Wiesje M van der Flier; Cornelis J Stam; Philip Scheltens; Frederik Barkhof
Journal:  Neurobiol Aging       Date:  2013-03-28       Impact factor: 4.673

5.  Realistic control of network dynamics.

Authors:  Sean P Cornelius; William L Kath; Adilson E Motter
Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

6.  Test-retest reliability of the default mode network in a multi-centric fMRI study of healthy elderly: Effects of data-driven physiological noise correction techniques.

Authors:  Rocco Marchitelli; Ludovico Minati; Moira Marizzoni; Beatriz Bosch; David Bartrés-Faz; Bernhard W Müller; Jens Wiltfang; Ute Fiedler; Luca Roccatagliata; Agnese Picco; Flavio Nobili; Oliver Blin; Stephanie Bombois; Renaud Lopes; Régis Bordet; Julien Sein; Jean-Philippe Ranjeva; Mira Didic; Hélène Gros-Dagnac; Pierre Payoux; Giada Zoccatelli; Franco Alessandrini; Alberto Beltramello; Núria Bargalló; Antonio Ferretti; Massimo Caulo; Marco Aiello; Carlo Cavaliere; Andrea Soricelli; Lucilla Parnetti; Roberto Tarducci; Piero Floridi; Magda Tsolaki; Manos Constantinidis; Antonios Drevelegas; Paolo Maria Rossini; Camillo Marra; Peter Schönknecht; Tilman Hensch; Karl-Titus Hoffmann; Joost P Kuijer; Pieter Jelle Visser; Frederik Barkhof; Giovanni B Frisoni; Jorge Jovicich
Journal:  Hum Brain Mapp       Date:  2016-03-17       Impact factor: 5.038

7.  Local Genome Topology Can Exhibit an Incompletely Rewired 3D-Folding State during Somatic Cell Reprogramming.

Authors:  Jonathan A Beagan; Thomas G Gilgenast; Jesi Kim; Zachary Plona; Heidi K Norton; Gui Hu; Sarah C Hsu; Emily J Shields; Xiaowen Lyu; Effie Apostolou; Konrad Hochedlinger; Victor G Corces; Job Dekker; Jennifer E Phillips-Cremins
Journal:  Cell Stem Cell       Date:  2016-05-05       Impact factor: 24.633

8.  Virtual Cortical Resection Reveals Push-Pull Network Control Preceding Seizure Evolution.

Authors:  Ankit N Khambhati; Kathryn A Davis; Timothy H Lucas; Brian Litt; Danielle S Bassett
Journal:  Neuron       Date:  2016-08-25       Impact factor: 17.173

9.  Stochastic blockmodeling of the modules and core of the Caenorhabditis elegans connectome.

Authors:  Dragana M Pavlovic; Petra E Vértes; Edward T Bullmore; William R Schafer; Thomas E Nichols
Journal:  PLoS One       Date:  2014-07-02       Impact factor: 3.240

Review 10.  Computational neurorehabilitation: modeling plasticity and learning to predict recovery.

Authors:  David J Reinkensmeyer; Etienne Burdet; Maura Casadio; John W Krakauer; Gert Kwakkel; Catherine E Lang; Stephan P Swinnen; Nick S Ward; Nicolas Schweighofer
Journal:  J Neuroeng Rehabil       Date:  2016-04-30       Impact factor: 5.208

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  10 in total

Review 1.  Neural engineering: the process, applications, and its role in the future of medicine.

Authors:  Evon S Ereifej; Courtney E Shell; Jonathon S Schofield; Hamid Charkhkar; Ivana Cuberovic; Alan D Dorval; Emily L Graczyk; Takashi D Y Kozai; Kevin J Otto; Dustin J Tyler; Cristin G Welle; Alik S Widge; José Zariffa; Chet T Moritz; Dennis J Bourbeau; Paul D Marasco
Journal:  J Neural Eng       Date:  2019-11-12       Impact factor: 5.379

2.  Role of Graph Architecture in Controlling Dynamical Networks with Applications to Neural Systems.

Authors:  Jason Z Kim; Jonathan M Soffer; Ari E Kahn; Jean M Vettel; Fabio Pasqualetti; Danielle S Bassett
Journal:  Nat Phys       Date:  2017-09-25       Impact factor: 20.034

Review 3.  A network engineering perspective on probing and perturbing cognition with neurofeedback.

Authors:  Danielle S Bassett; Ankit N Khambhati
Journal:  Ann N Y Acad Sci       Date:  2017-04-26       Impact factor: 5.691

4.  Design of optimal nonlinear network controllers for Alzheimer's disease.

Authors:  Lazaro M Sanchez-Rodriguez; Yasser Iturria-Medina; Erica A Baines; Sabela C Mallo; Mehdy Dousty; Roberto C Sotero
Journal:  PLoS Comput Biol       Date:  2018-05-24       Impact factor: 4.475

5.  White Matter Structural Network Analysis to Differentiate Alzheimer's Disease and Subcortical Ischemic Vascular Dementia.

Authors:  Mengmeng Feng; Yue Zhang; Yuanqing Liu; Zhiwei Wu; Ziyang Song; Mengya Ma; Yueju Wang; Hui Dai
Journal:  Front Aging Neurosci       Date:  2021-03-31       Impact factor: 5.750

Review 6.  Gut bless you: The microbiota-gut-brain axis in irritable bowel syndrome.

Authors:  Eline Margrete Randulff Hillestad; Aina van der Meeren; Bharat Halandur Nagaraja; Ben René Bjørsvik; Noman Haleem; Alfonso Benitez-Paez; Yolanda Sanz; Trygve Hausken; Gülen Arslan Lied; Arvid Lundervold; Birgitte Berentsen
Journal:  World J Gastroenterol       Date:  2022-01-28       Impact factor: 5.742

7.  Drug-resistant focal epilepsy in children is associated with increased modal controllability of the whole brain and epileptogenic regions.

Authors:  Aswin Chari; Kiran K Seunarine; Xiaosong He; Martin M Tisdall; Christopher A Clark; Dani S Bassett; Rod C Scott; Richard E Rosch
Journal:  Commun Biol       Date:  2022-04-28

8.  Association between brain structural network efficiency at term-equivalent age and early development of cerebral palsy in very preterm infants.

Authors:  Julia E Kline; Weihong Yuan; Karen Harpster; Mekibib Altaye; Nehal A Parikh
Journal:  Neuroimage       Date:  2021-11-07       Impact factor: 7.400

9.  Application of Graph Theory to Assess Static and Dynamic Brain Connectivity: Approaches for Building Brain Graphs.

Authors:  Qingbao Yu; Yuhui Du; Jiayu Chen; Jing Sui; Tulay Adali; Godfrey Pearlson; Vince D Calhoun
Journal:  Proc IEEE Inst Electr Electron Eng       Date:  2018-04-25       Impact factor: 10.961

10.  Bundled Three-Dimensional Human Axon Tracts Derived from Brain Organoids.

Authors:  D Kacy Cullen; Wisberty J Gordián-Vélez; Laura A Struzyna; Dennis Jgamadze; James Lim; Kathryn L Wofford; Kevin D Browne; H Isaac Chen
Journal:  iScience       Date:  2019-10-03
  10 in total

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