Literature DB >> 23803966

Realistic control of network dynamics.

Sean P Cornelius1, William L Kath, Adilson E Motter.   

Abstract

The control of complex networks is of paramount importance in areas as diverse as ecosystem management, emergency response and cell reprogramming. A fundamental property of networks is that perturbations to one node can affect other nodes, potentially causing the entire system to change behaviour or fail. Here we show that it is possible to exploit the same principle to control network behaviour. Our approach accounts for the nonlinear dynamics inherent to real systems, and allows bringing the system to a desired target state even when this state is not directly accessible due to constraints that limit the allowed interventions. Applications show that this framework permits reprogramming a network to a desired task, as well as rescuing networks from the brink of failure-which we illustrate through the mitigation of cascading failures in a power-grid network and the identification of potential drug targets in a signalling network of human cancer.

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Year:  2013        PMID: 23803966      PMCID: PMC3955710          DOI: 10.1038/ncomms2939

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  26 in total

1.  Catastrophic shifts in ecosystems.

Authors:  M Scheffer; S Carpenter; J A Foley; C Folke; B Walker
Journal:  Nature       Date:  2001-10-11       Impact factor: 49.962

2.  Catastrophic cascade of failures in interdependent networks.

Authors:  Sergey V Buldyrev; Roni Parshani; Gerald Paul; H Eugene Stanley; Shlomo Havlin
Journal:  Nature       Date:  2010-04-15       Impact factor: 49.962

3.  Systemic risk in banking ecosystems.

Authors:  Andrew G Haldane; Robert M May
Journal:  Nature       Date:  2011-01-20       Impact factor: 49.962

4.  Rescuing ecosystems from extinction cascades through compensatory perturbations.

Authors:  Sagar Sahasrabudhe; Adilson E Motter
Journal:  Nat Commun       Date:  2011-01-25       Impact factor: 14.919

Review 5.  Network medicine: a network-based approach to human disease.

Authors:  Albert-László Barabási; Natali Gulbahce; Joseph Loscalzo
Journal:  Nat Rev Genet       Date:  2011-01       Impact factor: 53.242

6.  Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors.

Authors:  Kazutoshi Takahashi; Shinya Yamanaka
Journal:  Cell       Date:  2006-08-10       Impact factor: 41.582

7.  Odefy--from discrete to continuous models.

Authors:  Jan Krumsiek; Sebastian Pölsterl; Dominik M Wittmann; Fabian J Theis
Journal:  BMC Bioinformatics       Date:  2010-05-07       Impact factor: 3.169

Review 8.  Large granular lymphocyte leukemia.

Authors:  Lubomir Sokol; Thomas P Loughran
Journal:  Oncologist       Date:  2006-03

9.  Highly efficient reprogramming to pluripotency and directed differentiation of human cells with synthetic modified mRNA.

Authors:  Luigi Warren; Philip D Manos; Tim Ahfeldt; Yuin-Han Loh; Hu Li; Frank Lau; Wataru Ebina; Pankaj K Mandal; Zachary D Smith; Alexander Meissner; George Q Daley; Andrew S Brack; James J Collins; Chad Cowan; Thorsten M Schlaeger; Derrick J Rossi
Journal:  Cell Stem Cell       Date:  2010-09-30       Impact factor: 24.633

10.  Predicting synthetic rescues in metabolic networks.

Authors:  Adilson E Motter; Natali Gulbahce; Eivind Almaas; Albert-László Barabási
Journal:  Mol Syst Biol       Date:  2008-02-12       Impact factor: 11.429

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  79 in total

1.  Networkcontrology.

Authors:  Adilson E Motter
Journal:  Chaos       Date:  2015-09       Impact factor: 3.642

2.  Predicting growth rate from gene expression.

Authors:  Thomas P Wytock; Adilson E Motter
Journal:  Proc Natl Acad Sci U S A       Date:  2018-12-21       Impact factor: 11.205

3.  Structure-based control of complex networks with nonlinear dynamics.

Authors:  Jorge Gomez Tejeda Zañudo; Gang Yang; Réka Albert
Journal:  Proc Natl Acad Sci U S A       Date:  2017-06-27       Impact factor: 11.205

4.  Role of Graph Architecture in Controlling Dynamical Networks with Applications to Neural Systems.

Authors:  Jason Z Kim; Jonathan M Soffer; Ari E Kahn; Jean M Vettel; Fabio Pasqualetti; Danielle S Bassett
Journal:  Nat Phys       Date:  2017-09-25       Impact factor: 20.034

5.  A minimization principle for the description of modes associated with finite-time instabilities.

Authors:  H Babaee; T P Sapsis
Journal:  Proc Math Phys Eng Sci       Date:  2016-02       Impact factor: 2.704

6.  State observation and sensor selection for nonlinear networks.

Authors:  Aleksandar Haber; Ferenc Molnar; Adilson E Motter
Journal:  IEEE Trans Control Netw Syst       Date:  2017-07-17

Review 7.  Emerging Frontiers of Neuroengineering: A Network Science of Brain Connectivity.

Authors:  Danielle S Bassett; Ankit N Khambhati; Scott T Grafton
Journal:  Annu Rev Biomed Eng       Date:  2017-03-27       Impact factor: 9.590

8.  Antagonistic Phenomena in Network Dynamics.

Authors:  Adilson E Motter; Marc Timme
Journal:  Annu Rev Condens Matter Phys       Date:  2018-03       Impact factor: 16.109

Review 9.  The dynamic control of signal transduction networks in cancer cells.

Authors:  Walter Kolch; Melinda Halasz; Marina Granovskaya; Boris N Kholodenko
Journal:  Nat Rev Cancer       Date:  2015-08-20       Impact factor: 60.716

10.  A Network Neuroscience of Neurofeedback for Clinical Translation.

Authors:  Andrew C Murphy; Danielle S Bassett
Journal:  Curr Opin Biomed Eng       Date:  2017-04-02
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