Literature DB >> 28374750

Structural basis of stringent PAM recognition by CRISPR-C2c1 in complex with sgRNA.

Dan Wu1, Xiaoyu Guan1, Yuwei Zhu1, Kuan Ren1, Zhiwei Huang1.   

Abstract

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Year:  2017        PMID： 28374750      PMCID： PMC5520857          DOI： 10.1038/cr.2017.46

Source DB:  PubMed          Journal:  Cell Res        ISSN： 1001-0602            Impact factor:   25.617


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  14 in total

Review 1.  CRISPR-Cas immunity in prokaryotes.

Authors:  Luciano A Marraffini
Journal:  Nature       Date:  2015-10-01       Impact factor: 49.962

2.  Crystal Structure of Staphylococcus aureus Cas9.

Authors:  Hiroshi Nishimasu; Le Cong; Winston X Yan; F Ann Ran; Bernd Zetsche; Yinqing Li; Arisa Kurabayashi; Ryuichiro Ishitani; Feng Zhang; Osamu Nureki
Journal:  Cell       Date:  2015-08-27       Impact factor: 41.582

3.  STRUCTURAL BIOLOGY. A Cas9-guide RNA complex preorganized for target DNA recognition.

Authors:  Fuguo Jiang; Kaihong Zhou; Linlin Ma; Saskia Gressel; Jennifer A Doudna
Journal:  Science       Date:  2015-06-26       Impact factor: 47.728

Review 4.  Expanding the Biologist's Toolkit with CRISPR-Cas9.

Authors:  Samuel H Sternberg; Jennifer A Doudna
Journal:  Mol Cell       Date:  2015-05-21       Impact factor: 17.970

5.  PAM-Dependent Target DNA Recognition and Cleavage by C2c1 CRISPR-Cas Endonuclease.

Authors:  Hui Yang; Pu Gao; Kanagalaghatta R Rajashankar; Dinshaw J Patel
Journal:  Cell       Date:  2016-12-15       Impact factor: 41.582

6.  Discovery and Functional Characterization of Diverse Class 2 CRISPR-Cas Systems.

Authors:  Sergey Shmakov; Omar O Abudayyeh; Kira S Makarova; Yuri I Wolf; Jonathan S Gootenberg; Ekaterina Semenova; Leonid Minakhin; Julia Joung; Silvana Konermann; Konstantin Severinov; Feng Zhang; Eugene V Koonin
Journal:  Mol Cell       Date:  2015-10-22       Impact factor: 17.970

Review 7.  An updated evolutionary classification of CRISPR-Cas systems.

Authors:  Kira S Makarova; Yuri I Wolf; Omer S Alkhnbashi; Fabrizio Costa; Shiraz A Shah; Sita J Saunders; Rodolphe Barrangou; Stan J J Brouns; Emmanuelle Charpentier; Daniel H Haft; Philippe Horvath; Sylvain Moineau; Francisco J M Mojica; Rebecca M Terns; Michael P Terns; Malcolm F White; Alexander F Yakunin; Roger A Garrett; John van der Oost; Rolf Backofen; Eugene V Koonin
Journal:  Nat Rev Microbiol       Date:  2015-09-28       Impact factor: 60.633

8.  C2c2 is a single-component programmable RNA-guided RNA-targeting CRISPR effector.

Authors:  Omar O Abudayyeh; Jonathan S Gootenberg; Silvana Konermann; Julia Joung; Ian M Slaymaker; David B T Cox; Sergey Shmakov; Kira S Makarova; Ekaterina Semenova; Leonid Minakhin; Konstantin Severinov; Aviv Regev; Eric S Lander; Eugene V Koonin; Feng Zhang
Journal:  Science       Date:  2016-06-02       Impact factor: 47.728

9.  Crystal Structure of Cpf1 in Complex with Guide RNA and Target DNA.

Authors:  Takashi Yamano; Hiroshi Nishimasu; Bernd Zetsche; Hisato Hirano; Ian M Slaymaker; Yinqing Li; Iana Fedorova; Takanori Nakane; Kira S Makarova; Eugene V Koonin; Ryuichiro Ishitani; Feng Zhang; Osamu Nureki
Journal:  Cell       Date:  2016-04-21       Impact factor: 41.582

10.  Structural basis of PAM-dependent target DNA recognition by the Cas9 endonuclease.

Authors:  Carolin Anders; Ole Niewoehner; Alessia Duerst; Martin Jinek
Journal:  Nature       Date:  2014-07-27       Impact factor: 49.962
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  13 in total

1.  CRISPR-Cas9 Editing of the Synthesis of Biodegradable Polyesters Polyhydroxyalkanaotes (PHA) in Pseudomonas putida KT2440.

Authors:  Si Liu; Tanja Narancic; Chris Davis; Kevin E O'Connor
Journal:  Methods Mol Biol       Date:  2022

2.  Structural basis of target DNA recognition by CRISPR-Cas12k for RNA-guided DNA transposition.

Authors:  Renjian Xiao; Shukun Wang; Ruijie Han; Zhuang Li; Clinton Gabel; Indranil Arun Mukherjee; Leifu Chang
Journal:  Mol Cell       Date:  2021-08-26       Impact factor: 17.970

Review 3.  The Revolution Continues: Newly Discovered Systems Expand the CRISPR-Cas Toolkit.

Authors:  Karthik Murugan; Kesavan Babu; Ramya Sundaresan; Rakhi Rajan; Dipali G Sashital
Journal:  Mol Cell       Date:  2017-10-05       Impact factor: 17.970

4.  DNA interference states of the hypercompact CRISPR-CasΦ effector.

Authors:  Patrick Pausch; Katarzyna M Soczek; Dominik A Herbst; Connor A Tsuchida; Basem Al-Shayeb; Jillian F Banfield; Eva Nogales; Jennifer A Doudna
Journal:  Nat Struct Mol Biol       Date:  2021-08-11       Impact factor: 15.369

5.  Cryo-EM structure of the RNA-guided ribonuclease Cas12g.

Authors:  Zhuang Li; Heng Zhang; Renjian Xiao; Ruijie Han; Leifu Chang
Journal:  Nat Chem Biol       Date:  2021-01-25       Impact factor: 15.040

6.  Mechanistic insights into the R-loop formation and cleavage in CRISPR-Cas12i1.

Authors:  Bo Zhang; Diyin Luo; Yu Li; Vanja Perčulija; Jing Chen; Jinying Lin; Yangmiao Ye; Songying Ouyang
Journal:  Nat Commun       Date:  2021-06-09       Impact factor: 14.919

7.  Engineering of CRISPR-Cas12b for human genome editing.

Authors:  Jonathan Strecker; Sara Jones; Balwina Koopal; Jonathan Schmid-Burgk; Bernd Zetsche; Linyi Gao; Kira S Makarova; Eugene V Koonin; Feng Zhang
Journal:  Nat Commun       Date:  2019-01-22       Impact factor: 14.919

Review 8.  The rapidly advancing Class 2 CRISPR-Cas technologies: A customizable toolbox for molecular manipulations.

Authors:  Jingyi Wang; Chenzi Zhang; Bo Feng
Journal:  J Cell Mol Med       Date:  2020-02-10       Impact factor: 5.310

9.  The application of a heat-inducible CRISPR/Cas12b (C2c1) genome editing system in tetraploid cotton (G. hirsutum) plants.

Authors:  Qiongqiong Wang; Muna Alariqi; Fuqiu Wang; Bo Li; Xiao Ding; Hangping Rui; Yajun Li; Zhongping Xu; Lei Qin; Lin Sun; Jianying Li; Jiawei Zou; Keith Lindsey; Xianlong Zhang; Shuangxia Jin
Journal:  Plant Biotechnol J       Date:  2020-06-08       Impact factor: 9.803

10.  Mechanisms for target recognition and cleavage by the Cas12i RNA-guided endonuclease.

Authors:  Heng Zhang; Zhuang Li; Renjian Xiao; Leifu Chang
Journal:  Nat Struct Mol Biol       Date:  2020-09-07       Impact factor: 15.369
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