Literature DB >> 28369433

The CRISPR-Cas9 system in Neisseria spp.

Yan Zhang.   

Abstract

Bacteria and archaea possess numerous defense systems to combat viral infections and other mobile genetic elements. Uniquely among these, CRISPR-Cas (clustered, regularly interspaced short palindromic repeats-CRISPR associated) provides adaptive genetic interference against foreign nucleic acids. Here we review recent advances on the CRISPR-Cas9 system in Neisseria spp, with a focus on its biological functions in genetic transfer, its mechanistic features that establish new paradigms and its technological applications in eukaryotic genome engineering. © FEMS 2017. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Entities:  

Keywords:  CRISPR-Cas9; Neisseria spp; RNA-guided adaptive interference; genome engineering

Mesh：

Year:  2017        PMID： 28369433      PMCID： PMC5406484          DOI： 10.1093/femspd/ftx036

Source DB:  PubMed          Journal:  Pathog Dis        ISSN： 2049-632X            Impact factor:   3.166


  81 in total

1.  Experimental definition of a clustered regularly interspaced short palindromic duplicon in Escherichia coli.

Authors:  Moran G Goren; Ido Yosef; Oren Auster; Udi Qimron
Journal:  J Mol Biol       Date:  2012-07-03       Impact factor: 5.469

Review 2.  Adaptation in CRISPR-Cas Systems.

Authors:  Samuel H Sternberg; Hagen Richter; Emmanuelle Charpentier; Udi Qimron
Journal:  Mol Cell       Date:  2016-03-03       Impact factor: 17.970

3.  Discovery and Functional Characterization of Diverse Class 2 CRISPR-Cas Systems.

Authors:  Sergey Shmakov; Omar O Abudayyeh; Kira S Makarova; Yuri I Wolf; Jonathan S Gootenberg; Ekaterina Semenova; Leonid Minakhin; Julia Joung; Silvana Konermann; Konstantin Severinov; Feng Zhang; Eugene V Koonin
Journal:  Mol Cell       Date:  2015-10-22       Impact factor: 17.970

4.  CRISPR interference limits horizontal gene transfer in staphylococci by targeting DNA.

Authors:  Luciano A Marraffini; Erik J Sontheimer
Journal:  Science       Date:  2008-12-19       Impact factor: 47.728

5.  Phage response to CRISPR-encoded resistance in Streptococcus thermophilus.

Authors:  Hélène Deveau; Rodolphe Barrangou; Josiane E Garneau; Jessica Labonté; Christophe Fremaux; Patrick Boyaval; Dennis A Romero; Philippe Horvath; Sylvain Moineau
Journal:  J Bacteriol       Date:  2007-12-07       Impact factor: 3.490

Review 6.  An updated evolutionary classification of CRISPR-Cas systems.

Authors:  Kira S Makarova; Yuri I Wolf; Omer S Alkhnbashi; Fabrizio Costa; Shiraz A Shah; Sita J Saunders; Rodolphe Barrangou; Stan J J Brouns; Emmanuelle Charpentier; Daniel H Haft; Philippe Horvath; Sylvain Moineau; Francisco J M Mojica; Rebecca M Terns; Michael P Terns; Malcolm F White; Alexander F Yakunin; Roger A Garrett; John van der Oost; Rolf Backofen; Eugene V Koonin
Journal:  Nat Rev Microbiol       Date:  2015-09-28       Impact factor: 60.633

7.  Regulation of dev, an operon that includes genes essential for Myxococcus xanthus development and CRISPR-associated genes and repeats.

Authors:  Poorna Viswanathan; Kimberly Murphy; Bryan Julien; Anthony G Garza; Lee Kroos
Journal:  J Bacteriol       Date:  2007-03-16       Impact factor: 3.490

8.  CAS9 transcriptional activators for target specificity screening and paired nickases for cooperative genome engineering.

Authors:  Prashant Mali; John Aach; P Benjamin Stranges; Kevin M Esvelt; Mark Moosburner; Sriram Kosuri; Luhan Yang; George M Church
Journal:  Nat Biotechnol       Date:  2013-08-01       Impact factor: 54.908

9.  Dynamic imaging of genomic loci in living human cells by an optimized CRISPR/Cas system.

Authors:  Baohui Chen; Luke A Gilbert; Beth A Cimini; Joerg Schnitzbauer; Wei Zhang; Gene-Wei Li; Jason Park; Elizabeth H Blackburn; Jonathan S Weissman; Lei S Qi; Bo Huang
Journal:  Cell       Date:  2013-12-19       Impact factor: 41.582

10.  RNA-guided editing of bacterial genomes using CRISPR-Cas systems.

Authors:  Wenyan Jiang; David Bikard; David Cox; Feng Zhang; Luciano A Marraffini
Journal:  Nat Biotechnol       Date:  2013-01-29       Impact factor: 54.908
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  5 in total

Review 1.  Type II-C CRISPR-Cas9 Biology, Mechanism, and Application.

Authors:  Aamir Mir; Alireza Edraki; Jooyoung Lee; Erik J Sontheimer
Journal:  ACS Chem Biol       Date:  2017-12-20       Impact factor: 5.100

2.  Programmable RNA Cleavage and Recognition by a Natural CRISPR-Cas9 System from Neisseria meningitidis.

Authors:  Beth A Rousseau; Zhonggang Hou; Max J Gramelspacher; Yan Zhang
Journal:  Mol Cell       Date:  2018-02-15       Impact factor: 17.970

3.  Prediction of Prophages and Their Host Ranges in Pathogenic and Commensal Neisseria Species.

Authors:  Giulia Orazi; Alan J Collins; Rachel J Whitaker
Journal:  mSystems       Date:  2022-04-14       Impact factor: 7.324

4.  NmeCas9 is an intrinsically high-fidelity genome-editing platform.

Authors:  Nadia Amrani; Xin D Gao; Pengpeng Liu; Alireza Edraki; Aamir Mir; Raed Ibraheim; Ankit Gupta; Kanae E Sasaki; Tong Wu; Paul D Donohoue; Alexander H Settle; Alexandra M Lied; Kyle McGovern; Chris K Fuller; Peter Cameron; Thomas G Fazzio; Lihua Julie Zhu; Scot A Wolfe; Erik J Sontheimer
Journal:  Genome Biol       Date:  2018-12-05       Impact factor: 13.583

5.  Virulence genes and previously unexplored gene clusters in four commensal Neisseria spp. isolated from the human throat expand the neisserial gene repertoire.

Authors:  Alan Calder; Chukwuma Jude Menkiti; Aylin Çağdaş; Jefferson Lisboa Santos; Ricarda Streich; Alice Wong; Amir H Avini; Ebrima Bojang; Karththeepan Yogamanoharan; Nivetha Sivanesan; Besma Ali; Mariam Ashrafi; Abdirizak Issa; Tajinder Kaur; Aisha Latif; Hani A Sheik Mohamed; Atifa Maqsood; Laxmi Tamang; Emily Swager; Alex J Stringer; Lori A S Snyder
Journal:  Microb Genom       Date:  2020-08-26
  5 in total

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