Literature DB >> 28348147

How do messenger RNA splicing alterations drive myelodysplasia?

Poorval Joshi1, Stephanie Halene1, Omar Abdel-Wahab2.   

Abstract

Mutations in RNA splicing factors are the single most common class of genetic alterations in myelodysplastic syndrome (MDS) patients. Although much has been learned about how these mutations affect splicing at a global- and transcript-specific level, critical questions about the role of these mutations in MDS development and maintenance remain. Here we present the questions to be addressed in order to understand the unique enrichment of these mutations in MDS.
© 2017 by The American Society of Hematology.

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Year:  2017        PMID: 28348147      PMCID: PMC5418633          DOI: 10.1182/blood-2017-02-692715

Source DB:  PubMed          Journal:  Blood        ISSN: 0006-4971            Impact factor:   22.113


  62 in total

1.  Orchestrated intron retention regulates normal granulocyte differentiation.

Authors:  Justin J-L Wong; William Ritchie; Olivia A Ebner; Matthias Selbach; Jason W H Wong; Yizhou Huang; Dadi Gao; Natalia Pinello; Maria Gonzalez; Kinsha Baidya; Annora Thoeng; Teh-Liane Khoo; Charles G Bailey; Jeff Holst; John E J Rasko
Journal:  Cell       Date:  2013-08-01       Impact factor: 41.582

2.  MYC regulates the core pre-mRNA splicing machinery as an essential step in lymphomagenesis.

Authors:  Cheryl M Koh; Marco Bezzi; Diana H P Low; Wei Xia Ang; Shun Xie Teo; Florence P H Gay; Muthafar Al-Haddawi; Soo Yong Tan; Motomi Osato; Arianna Sabò; Bruno Amati; Keng Boon Wee; Ernesto Guccione
Journal:  Nature       Date:  2015-05-11       Impact factor: 49.962

Review 3.  Mechanisms and Regulation of Alternative Pre-mRNA Splicing.

Authors:  Yeon Lee; Donald C Rio
Journal:  Annu Rev Biochem       Date:  2015-03-12       Impact factor: 23.643

4.  Telomere dysfunction drives aberrant hematopoietic differentiation and myelodysplastic syndrome.

Authors:  Simona Colla; Derrick Sek Tong Ong; Yamini Ogoti; Matteo Marchesini; Nipun A Mistry; Karen Clise-Dwyer; Sonny A Ang; Paola Storti; Andrea Viale; Nicola Giuliani; Kathryn Ruisaard; Irene Ganan Gomez; Christopher A Bristow; Marcos Estecio; David C Weksberg; Yan Wing Ho; Baoli Hu; Giannicola Genovese; Piergiorgio Pettazzoni; Asha S Multani; Shan Jiang; Sujun Hua; Michael C Ryan; Alessandro Carugo; Luigi Nezi; Yue Wei; Hui Yang; Marianna D'Anca; Li Zhang; Sarah Gaddis; Ting Gong; James W Horner; Timothy P Heffernan; Philip Jones; Laurence J N Cooper; Han Liang; Hagop Kantarjian; Y Alan Wang; Lynda Chin; Carlos Bueso-Ramos; Guillermo Garcia-Manero; Ronald A DePinho
Journal:  Cancer Cell       Date:  2015-05-11       Impact factor: 31.743

5.  Detection of recurrent alternative splicing switches in tumor samples reveals novel signatures of cancer.

Authors:  Endre Sebestyén; Michał Zawisza; Eduardo Eyras
Journal:  Nucleic Acids Res       Date:  2015-01-10       Impact factor: 16.971

6.  Physiologic Expression of Sf3b1(K700E) Causes Impaired Erythropoiesis, Aberrant Splicing, and Sensitivity to Therapeutic Spliceosome Modulation.

Authors:  Esther A Obeng; Ryan J Chappell; Michael Seiler; Michelle C Chen; Dean R Campagna; Paul J Schmidt; Rebekka K Schneider; Allegra M Lord; Lili Wang; Rutendo G Gambe; Marie E McConkey; Abdullah M Ali; Azra Raza; Lihua Yu; Silvia Buonamici; Peter G Smith; Ann Mullally; Catherine J Wu; Mark D Fleming; Benjamin L Ebert
Journal:  Cancer Cell       Date:  2016-09-12       Impact factor: 31.743

7.  Gene expression profiling in the myelodysplastic syndromes using cDNA microarray technology.

Authors:  Andrea Pellagatti; Noor Esoof; Fiona Watkins; Cordelia F Langford; David Vetrie; Lisa J Campbell; Carrie Fidler; James D Cavenagh; Helen Eagleton; Peter Gordon; Barrie Woodcock; Beena Pushkaran; Mark Kwan; James S Wainscoat; Jacqueline Boultwood
Journal:  Br J Haematol       Date:  2004-06       Impact factor: 6.998

8.  Cancer-Associated SF3B1 Hotspot Mutations Induce Cryptic 3' Splice Site Selection through Use of a Different Branch Point.

Authors:  Rachel B Darman; Michael Seiler; Anant A Agrawal; Kian H Lim; Shouyong Peng; Daniel Aird; Suzanna L Bailey; Erica B Bhavsar; Betty Chan; Simona Colla; Laura Corson; Jacob Feala; Peter Fekkes; Kana Ichikawa; Gregg F Keaney; Linda Lee; Pavan Kumar; Kaiko Kunii; Crystal MacKenzie; Mark Matijevic; Yoshiharu Mizui; Khin Myint; Eun Sun Park; Xiaoling Puyang; Anand Selvaraj; Michael P Thomas; Jennifer Tsai; John Y Wang; Markus Warmuth; Hui Yang; Ping Zhu; Guillermo Garcia-Manero; Richard R Furman; Lihua Yu; Peter G Smith; Silvia Buonamici
Journal:  Cell Rep       Date:  2015-10-22       Impact factor: 9.423

9.  U2AF1 mutations alter sequence specificity of pre-mRNA binding and splicing.

Authors:  T Okeyo-Owuor; B S White; R Chatrikhi; D R Mohan; S Kim; M Griffith; L Ding; S Ketkar-Kulkarni; J Hundal; K M Laird; C L Kielkopf; T J Ley; M J Walter; T A Graubert
Journal:  Leukemia       Date:  2014-10-14       Impact factor: 11.528

10.  Alternative isoform regulation in human tissue transcriptomes.

Authors:  Eric T Wang; Rickard Sandberg; Shujun Luo; Irina Khrebtukova; Lu Zhang; Christine Mayr; Stephen F Kingsmore; Gary P Schroth; Christopher B Burge
Journal:  Nature       Date:  2008-11-27       Impact factor: 49.962

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  12 in total

Review 1.  Structural and functional modularity of the U2 snRNP in pre-mRNA splicing.

Authors:  Clarisse van der Feltz; Aaron A Hoskins
Journal:  Crit Rev Biochem Mol Biol       Date:  2019-11-20       Impact factor: 8.250

Review 2.  Insights from structures of cancer-relevant pre-mRNA splicing factors.

Authors:  Clara L Kielkopf
Journal:  Curr Opin Genet Dev       Date:  2017-11-10       Impact factor: 5.578

3.  Impact of splicing factor mutations on clinical features in patients with myelodysplastic syndromes.

Authors:  Naoki Shingai; Yuka Harada; Hiroko Iizuka; Yosuke Ogata; Noriko Doki; Kazuteru Ohashi; Masao Hagihara; Norio Komatsu; Hironori Harada
Journal:  Int J Hematol       Date:  2018-10-23       Impact factor: 2.490

4.  Co-transcriptional splicing regulates 3' end cleavage during mammalian erythropoiesis.

Authors:  Kirsten A Reimer; Claudia A Mimoso; Karen Adelman; Karla M Neugebauer
Journal:  Mol Cell       Date:  2021-01-12       Impact factor: 17.970

5.  Selective defects in gene expression control genome instability in yeast splicing mutants.

Authors:  Annie S Tam; Tianna S Sihota; Karissa L Milbury; Anni Zhang; Veena Mathew; Peter C Stirling
Journal:  Mol Biol Cell       Date:  2018-11-21       Impact factor: 4.138

Review 6.  Circular RNAs in Hematopoiesis with a Focus on Acute Myeloid Leukemia and Myelodysplastic Syndrome.

Authors:  Michaela Dostalova Merkerova; Zdenek Krejcik; Katarina Szikszai; David Kundrat
Journal:  Int J Mol Sci       Date:  2020-08-19       Impact factor: 5.923

7.  Clinical features and biological implications of different U2AF1 mutation types in myelodysplastic syndromes.

Authors:  Bing Li; Jinqin Liu; Yujiao Jia; Jingya Wang; Zefeng Xu; Tiejun Qin; Zhongxun Shi; Zhen Song; Shuailing Peng; Huijun Huang; Liwei Fang; Hongli Zhang; Lijuan Pan; Naibo Hu; Shiqiang Qu; Yue Zhang; Jian Wu; Na Liu; Kun Ru; Gang Huang; Zhijian Xiao
Journal:  Genes Chromosomes Cancer       Date:  2017-11-23       Impact factor: 4.263

8.  Distinct transcriptomic and exomic abnormalities within myelodysplastic syndrome marrow cells.

Authors:  Hogune Im; Varsha Rao; Kunju Sridhar; Jason Bentley; Tejaswini Mishra; Rui Chen; Jeff Hall; Armin Graber; Yan Zhang; Xiao Li; George I Mias; Michael P Snyder; Peter L Greenberg
Journal:  Leuk Lymphoma       Date:  2018-04-04

Review 9.  Blood Relatives: Splicing Mechanisms underlying Erythropoiesis in Health and Disease.

Authors:  Kirsten A Reimer; Karla M Neugebauer
Journal:  F1000Res       Date:  2018-08-30

10.  Myeloid Disease Mutations of Splicing Factor SRSF2 Cause G2-M Arrest and Skewed Differentiation of Human Hematopoietic Stem and Progenitor Cells.

Authors:  Aditi Bapat; Nakia Keita; William Martelly; Paul Kang; Christopher Seet; Jeffery R Jacobsen; Peter Stoilov; Chengcheng Hu; Gay M Crooks; Shalini Sharma
Journal:  Stem Cells       Date:  2018-07-27       Impact factor: 6.277

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