Literature DB >> 28232896

Quarterly intrinsic disorder digest (January-February-March, 2014).

Shelly DeForte1, Krishna D Reddy1, Vladimir N Uversky2.   

Abstract

This is the 5th issue of the Digested Disorder series that represents a reader's digest of the scientific literature on intrinsically disordered proteins. We continue to use only 2 criteria for inclusion of a paper to this digest: The publication date (a paper should be published within the covered time frame) and the topic (a paper should be dedicated to any aspect of protein intrinsic disorder). The current digest issue covers papers published during the first quarter of 2014; i.e., during the period of January, February, and March of 2014. Similar to previous issues, the papers are grouped hierarchically by topics they cover, and for each of the included papers a short description is given on its major findings.

Entities:  

Keywords:  database; intrinsically disordered proteins; protein function; structural ensemble; structural proteins

Year:  2016        PMID: 28232896      PMCID: PMC5314902          DOI: 10.1080/21690707.2016.1153395

Source DB:  PubMed          Journal:  Intrinsically Disord Proteins        ISSN: 2169-0707


  98 in total

1.  Occurrence of disordered patterns and homorepeats in eukaryotic and bacterial proteomes.

Authors:  M Yu Lobanov; O V Galzitskaya
Journal:  Mol Biosyst       Date:  2011-10-18

2.  Genome-scale prediction of proteins with long intrinsically disordered regions.

Authors:  Zhenling Peng; Marcin J Mizianty; Lukasz Kurgan
Journal:  Proteins       Date:  2013-09-17

3.  Accurate prediction of disorder in protein chains with a comprehensive and empirically designed consensus.

Authors:  Xiao Fan; Lukasz Kurgan
Journal:  J Biomol Struct Dyn       Date:  2013-03-27

4.  Affinity maturation of a computationally designed binding protein affords a functional but disordered polypeptide.

Authors:  Maren Butz; Peter Kast; Donald Hilvert
Journal:  J Struct Biol       Date:  2013-03-26       Impact factor: 2.867

5.  Dancing retro: solution structure and micelle interactions of the retro-SH3-domain, retro-SHH-'Bergerac'.

Authors:  Victor P Kutyshenko; Dmitry A Prokhorov; Nikolaj V Molochkov; Mars G Sharapov; Igor Kolesnikov; Vladimir N Uversky
Journal:  J Biomol Struct Dyn       Date:  2013-03-25

Review 6.  Disordered interactome of human papillomavirus.

Authors:  Bin Xue; Ketaki Ganti; Alejandro Rabionet; Lawrence Banks; Vladimir N Uversky
Journal:  Curr Pharm Des       Date:  2014       Impact factor: 3.116

Review 7.  Ubiquitin-independent proteasomal degradation.

Authors:  Jenny Erales; Philip Coffino
Journal:  Biochim Biophys Acta       Date:  2013-05-14

Review 8.  Pupylation as a signal for proteasomal degradation in bacteria.

Authors:  Frank Striebel; Frank Imkamp; Dennis Özcelik; Eilika Weber-Ban
Journal:  Biochim Biophys Acta       Date:  2013-04-02

9.  DisProt: the Database of Disordered Proteins.

Authors:  Megan Sickmeier; Justin A Hamilton; Tanguy LeGall; Vladimir Vacic; Marc S Cortese; Agnes Tantos; Beata Szabo; Peter Tompa; Jake Chen; Vladimir N Uversky; Zoran Obradovic; A Keith Dunker
Journal:  Nucleic Acids Res       Date:  2006-12-01       Impact factor: 16.971

10.  D²P²: database of disordered protein predictions.

Authors:  Matt E Oates; Pedro Romero; Takashi Ishida; Mohamed Ghalwash; Marcin J Mizianty; Bin Xue; Zsuzsanna Dosztányi; Vladimir N Uversky; Zoran Obradovic; Lukasz Kurgan; A Keith Dunker; Julian Gough
Journal:  Nucleic Acids Res       Date:  2012-11-29       Impact factor: 16.971

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  2 in total

1.  Quarterly intrinsic disorder digest (April-May-June, 2014).

Authors:  Shelly DeForte; Vladimir N Uversky
Journal:  Intrinsically Disord Proteins       Date:  2017-03-01

Review 2.  Digested disorder: Quarterly intrinsic disorder digest (April-May-June, 2013).

Authors:  Shelly DeForte; Krishna D Reddy; Vladimir N Uversky
Journal:  Intrinsically Disord Proteins       Date:  2013-01-01
  2 in total

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