Literature DB >> 28257692

A Ribosomopathy Reveals Decoding Defective Ribosomes Driving Human Dysmorphism.

Nahuel A Paolini1, Martin Attwood2, Samuel B Sondalle3, Carolina Marques Dos Santos Vieira4, Anita M van Adrichem5, Franca M di Summa1, Marie-Françoise O'Donohue6, Pierre-Emmanuel Gleizes6, Swaksha Rachuri4, Joseph W Briggs4, Roman Fischer2, Peter J Ratcliffe2, Marcin W Wlodarski7, Riekelt H Houtkooper5, Marieke von Lindern1, Taco W Kuijpers8, Jonathan D Dinman4, Susan J Baserga9, Matthew E Cockman2, Alyson W MacInnes10.   

Abstract

Ribosomal protein (RP) gene mutations, mostly associated with inherited or acquired bone marrow failure, are believed to drive disease by slowing the rate of protein synthesis. Here de novo missense mutations in the RPS23 gene, which codes for uS12, are reported in two unrelated individuals with microcephaly, hearing loss, and overlapping dysmorphic features. One individual additionally presents with intellectual disability and autism spectrum disorder. The amino acid substitutions lie in two highly conserved loop regions of uS12 with known roles in maintaining the accuracy of mRNA codon translation. Primary cells revealed one substitution severely impaired OGFOD1-dependent hydroxylation of a neighboring proline residue resulting in 40S ribosomal subunits that were blocked from polysome formation. The other disrupted a predicted pi-pi stacking interaction between two phenylalanine residues leading to a destabilized uS12 that was poorly tolerated in 40S subunit biogenesis. Despite no evidence of a reduction in the rate of mRNA translation, these uS12 variants impaired the accuracy of mRNA translation and rendered cells highly sensitive to oxidative stress. These discoveries describe a ribosomopathy linked to uS12 and reveal mechanistic distinctions between RP gene mutations driving hematopoietic disease and those resulting in developmental disorders.
Copyright © 2017 American Society of Human Genetics. Published by Elsevier Inc. All rights reserved.

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Year:  2017        PMID: 28257692      PMCID: PMC5339345          DOI: 10.1016/j.ajhg.2017.01.034

Source DB:  PubMed          Journal:  Am J Hum Genet        ISSN: 0002-9297            Impact factor:   11.025


  44 in total

1.  Recognition of cognate transfer RNA by the 30S ribosomal subunit.

Authors:  J M Ogle; D E Brodersen; W M Clemons ; M J Tarry; A P Carter; V Ramakrishnan
Journal:  Science       Date:  2001-05-04       Impact factor: 47.728

2.  Direct visualization at the single-cell level of siRNA electrotransfer into cancer cells.

Authors:  A Paganin-Gioanni; E Bellard; J M Escoffre; M P Rols; J Teissié; M Golzio
Journal:  Proc Natl Acad Sci U S A       Date:  2011-06-13       Impact factor: 11.205

3.  A novel ribosomopathy caused by dysfunction of RPL10 disrupts neurodevelopment and causes X-linked microcephaly in humans.

Authors:  Susan S Brooks; Alissa L Wall; Christelle Golzio; David W Reid; Amalia Kondyles; Jason R Willer; Christina Botti; Christopher V Nicchitta; Nicholas Katsanis; Erica E Davis
Journal:  Genetics       Date:  2014-10       Impact factor: 4.562

4.  Rapid and reliable protein extraction from yeast.

Authors:  V V Kushnirov
Journal:  Yeast       Date:  2000-06-30       Impact factor: 3.239

5.  Translation of branched-chain aminotransferase-1 transcripts is impaired in cells haploinsufficient for ribosomal protein genes.

Authors:  Tamara C Pereboom; Albert Bondt; Paschalina Pallaki; Tim D Klasson; Yvonne J Goos; Paul B Essers; Marian J A Groot Koerkamp; Hanna T Gazda; Frank C P Holstege; Lydie Da Costa; Alyson W MacInnes
Journal:  Exp Hematol       Date:  2014-01-23       Impact factor: 3.084

6.  Ribosomal protein SA haploinsufficiency in humans with isolated congenital asplenia.

Authors:  Alexandre Bolze; Nizar Mahlaoui; Minji Byun; Bridget Turner; Nikolaus Trede; Steven R Ellis; Avinash Abhyankar; Yuval Itan; Etienne Patin; Samuel Brebner; Paul Sackstein; Anne Puel; Capucine Picard; Laurent Abel; Lluis Quintana-Murci; Saul N Faust; Anthony P Williams; Richard Baretto; Michael Duddridge; Usha Kini; Andrew J Pollard; Catherine Gaud; Pierre Frange; Daniel Orbach; Jean-Francois Emile; Jean-Louis Stephan; Ricardo Sorensen; Alessandro Plebani; Lennart Hammarstrom; Mary Ellen Conley; Licia Selleri; Jean-Laurent Casanova
Journal:  Science       Date:  2013-04-11       Impact factor: 47.728

7.  The ribosomal basis of Diamond-Blackfan Anemia: mutation and database update.

Authors:  Ilenia Boria; Emanuela Garelli; Hanna T Gazda; Anna Aspesi; Paola Quarello; Elisa Pavesi; Daniela Ferrante; Joerg J Meerpohl; Mutlu Kartal; Lydie Da Costa; Alexis Proust; Thierry Leblanc; Maud Simansour; Niklas Dahl; Anne-Sophie Fröjmark; Dagmar Pospisilova; Radek Cmejla; Alan H Beggs; Mee R Sheen; Michael Landowski; Christopher M Buros; Catherine M Clinton; Lori J Dobson; Adrianna Vlachos; Eva Atsidaftos; Jeffrey M Lipton; Steven R Ellis; Ugo Ramenghi; Irma Dianzani
Journal:  Hum Mutat       Date:  2010-12       Impact factor: 4.878

8.  Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega.

Authors:  Fabian Sievers; Andreas Wilm; David Dineen; Toby J Gibson; Kevin Karplus; Weizhong Li; Rodrigo Lopez; Hamish McWilliam; Michael Remmert; Johannes Söding; Julie D Thompson; Desmond G Higgins
Journal:  Mol Syst Biol       Date:  2011-10-11       Impact factor: 11.429

9.  Establishment of Epstein-Barr virus growth-transformed lymphoblastoid cell lines.

Authors:  Joyce Hui-Yuen; Shane McAllister; Siva Koganti; Erik Hill; Sumita Bhaduri-McIntosh
Journal:  J Vis Exp       Date:  2011-11-08       Impact factor: 1.355

10.  OGFOD1 catalyzes prolyl hydroxylation of RPS23 and is involved in translation control and stress granule formation.

Authors:  Rachelle S Singleton; Phebee Liu-Yi; Fabio Formenti; Wei Ge; Rok Sekirnik; Roman Fischer; Julie Adam; Patrick J Pollard; Alexander Wolf; Armin Thalhammer; Christoph Loenarz; Emily Flashman; Atsushi Yamamoto; Mathew L Coleman; Benedikt M Kessler; Pablo Wappner; Christopher J Schofield; Peter J Ratcliffe; Matthew E Cockman
Journal:  Proc Natl Acad Sci U S A       Date:  2014-02-18       Impact factor: 11.205

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  36 in total

1.  Decoding the Function of Expansion Segments in Ribosomes.

Authors:  Kotaro Fujii; Teodorus Theo Susanto; Saumya Saurabh; Maria Barna
Journal:  Mol Cell       Date:  2018-12-20       Impact factor: 17.970

2.  The ribosomal prolyl-hydroxylase OGFOD1 decreases during cardiac differentiation and modulates translation and splicing.

Authors:  Andrea Stoehr; Leslie Kennedy; Yanqin Yang; Sajni Patel; Yongshun Lin; Kaari L Linask; Maria Fergusson; Jun Zhu; Marjan Gucek; Jizhong Zou; Elizabeth Murphy
Journal:  JCI Insight       Date:  2019-05-21

3.  The complete structure of the small-subunit processome.

Authors:  Jonas Barandun; Malik Chaker-Margot; Mirjam Hunziker; Kelly R Molloy; Brian T Chait; Sebastian Klinge
Journal:  Nat Struct Mol Biol       Date:  2017-09-25       Impact factor: 15.369

4.  RPL13 Variants Cause Spondyloepimetaphyseal Dysplasia with Severe Short Stature.

Authors:  Cedric Le Caignec; Benjamin Ory; François Lamoureux; Marie-Francoise O'Donohue; Emilien Orgebin; Pierre Lindenbaum; Stéphane Téletchéa; Manon Saby; Anna Hurst; Katherine Nelson; Shawn R Gilbert; Yael Wilnai; Leonid Zeitlin; Eitan Segev; Robel Tesfaye; Mathilde Nizon; Benjamin Cogne; Stéphane Bezieau; Loic Geoffroy; Antoine Hamel; Emmanuelle Mayrargue; Benoît de Courtivron; Aliette Decock-Giraudaud; Céline Charrier; Olivier Pichon; Christelle Retière; Richard Redon; Alexander Pepler; Kirsty McWalter; Lydie Da Costa; Annick Toutain; Pierre-Emmanuel Gleizes; Marc Baud'huin; Bertrand Isidor
Journal:  Am J Hum Genet       Date:  2019-10-17       Impact factor: 11.025

5.  Maternal Ribosomes Are Sufficient for Tissue Diversification during Embryonic Development in C. elegans.

Authors:  Elif Sarinay Cenik; Xuefeng Meng; Ngang Heok Tang; Richard Nelson Hall; Joshua A Arribere; Can Cenik; Yishi Jin; Andrew Fire
Journal:  Dev Cell       Date:  2019-02-21       Impact factor: 12.270

Review 6.  Heterogeneity and specialized functions of translation machinery: from genes to organisms.

Authors:  Naomi R Genuth; Maria Barna
Journal:  Nat Rev Genet       Date:  2018-07       Impact factor: 53.242

Review 7.  Ribosomopathies: Old Concepts, New Controversies.

Authors:  Katherine I Farley-Barnes; Lisa M Ogawa; Susan J Baserga
Journal:  Trends Genet       Date:  2019-07-31       Impact factor: 11.639

Review 8.  Ribosomal biogenesis as an emerging target of neurodevelopmental pathologies.

Authors:  Michal Hetman; Lukasz P Slomnicki
Journal:  J Neurochem       Date:  2018-11-12       Impact factor: 5.372

Review 9.  Translation Elongation and Recoding in Eukaryotes.

Authors:  Thomas E Dever; Jonathan D Dinman; Rachel Green
Journal:  Cold Spring Harb Perspect Biol       Date:  2018-08-01       Impact factor: 10.005

Review 10.  mRNA Translation Gone Awry: Translation Fidelity and Neurological Disease.

Authors:  Mridu Kapur; Susan L Ackerman
Journal:  Trends Genet       Date:  2018-01-16       Impact factor: 11.639

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