Literature DB >> 28223440

IDN2 Interacts with RPA and Facilitates DNA Double-Strand Break Repair by Homologous Recombination in Arabidopsis.

Mingming Liu1,2, Zhaoqing Ba3, Pedro Costa-Nunes4, Wei Wei3, Lanxia Li3, Fansi Kong5, Yan Li3, Jijie Chai3,6, Olga Pontes4, Yijun Qi7,6.   

Abstract

Repair of DNA double-strand breaks (DSBs) is critical for the maintenance of genome integrity. We previously showed that DSB-induced small RNAs (diRNAs) facilitate homologous recombination-mediated DSB repair in Arabidopsis thaliana Here, we show that INVOLVED IN DE NOVO2 (IDN2), a double-stranded RNA binding protein involved in small RNA-directed DNA methylation, is required for DSB repair in Arabidopsis. We find that IDN2 interacts with the heterotrimeric replication protein A (RPA) complex. Depletion of IDN2 or the diRNA binding ARGONAUTE2 leads to increased accumulation of RPA at DSB sites and mislocalization of the recombination factor RAD51. These findings support a model in which IDN2 interacts with RPA and facilitates the release of RPA from single-stranded DNA tails and subsequent recruitment of RAD51 at DSB sites to promote DSB repair.
© 2017 American Society of Plant Biologists. All rights reserved.

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Year:  2017        PMID: 28223440      PMCID: PMC5385954          DOI: 10.1105/tpc.16.00769

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  50 in total

Review 1.  RNAi in Plants: An Argonaute-Centered View.

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Journal:  Plant Cell       Date:  2016-02-11       Impact factor: 11.277

2.  RAD5A, RECQ4A, and MUS81 have specific functions in homologous recombination and define different pathways of DNA repair in Arabidopsis thaliana.

Authors:  Anja Mannuss; Stefanie Dukowic-Schulze; Stefanie Suer; Frank Hartung; Michael Pacher; Holger Puchta
Journal:  Plant Cell       Date:  2010-10-22       Impact factor: 11.277

3.  Arabidopsis mesophyll protoplasts: a versatile cell system for transient gene expression analysis.

Authors:  Sang-Dong Yoo; Young-Hee Cho; Jen Sheen
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

Review 4.  RNA-directed DNA methylation: an epigenetic pathway of increasing complexity.

Authors:  Marjori A Matzke; Rebecca A Mosher
Journal:  Nat Rev Genet       Date:  2014-05-08       Impact factor: 53.242

5.  DNA DAMAGE BINDING PROTEIN2 Shapes the DNA Methylation Landscape.

Authors:  Catherine Schalk; Stéphanie Drevensek; Amira Kramdi; Mohamed Kassam; Ikhlak Ahmed; Valérie Cognat; Stéfanie Graindorge; Marc Bergdoll; Nicolas Baumberger; Dimitri Heintz; Chris Bowler; Pascal Genschik; Fredy Barneche; Vincent Colot; Jean Molinier
Journal:  Plant Cell       Date:  2016-08-16       Impact factor: 11.277

6.  Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana.

Authors:  S J Clough; A F Bent
Journal:  Plant J       Date:  1998-12       Impact factor: 6.417

7.  Identification of nuclear dicing bodies containing proteins for microRNA biogenesis in living Arabidopsis plants.

Authors:  Yuda Fang; David L Spector
Journal:  Curr Biol       Date:  2007-04-19       Impact factor: 10.834

8.  RNF4, a SUMO-targeted ubiquitin E3 ligase, promotes DNA double-strand break repair.

Authors:  Yaron Galanty; Rimma Belotserkovskaya; Julia Coates; Stephen P Jackson
Journal:  Genes Dev       Date:  2012-06-01       Impact factor: 11.361

9.  Site-specific DICER and DROSHA RNA products control the DNA-damage response.

Authors:  Sofia Francia; Flavia Michelini; Alka Saxena; Dave Tang; Michiel de Hoon; Viviana Anelli; Marina Mione; Piero Carninci; Fabrizio d'Adda di Fagagna
Journal:  Nature       Date:  2012-08-09       Impact factor: 49.962

10.  ATP-dependent chromatin remodeling in the DNA-damage response.

Authors:  Hannes Lans; Jurgen A Marteijn; Wim Vermeulen
Journal:  Epigenetics Chromatin       Date:  2012-01-30       Impact factor: 4.954

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  8 in total

1.  LSD1-LIKE1-Mediated H3K4me2 Demethylation Is Required for Homologous Recombination Repair.

Authors:  Takeshi Hirakawa; Keiko Kuwata; Maria E Gallego; Charles I White; Mika Nomoto; Yasuomi Tada; Sachihiro Matsunaga
Journal:  Plant Physiol       Date:  2019-07-31       Impact factor: 8.340

2.  The Transcriptional Coactivator ADA2b Recruits a Structural Maintenance Protein to Double-Strand Breaks during DNA Repair in Plants.

Authors:  Jianbin Lai; Jieming Jiang; Qian Wu; Ning Mao; Danlu Han; Huan Hu; Chengwei Yang
Journal:  Plant Physiol       Date:  2018-02-20       Impact factor: 8.340

3.  A diRNA-protein scaffold module mediates SMC5/6 recruitment in plant DNA repair.

Authors:  Jieming Jiang; Xiaolin Ou; Danlu Han; Zhipeng He; Song Liu; Ning Mao; Zhonghui Zhang; Chang-Lian Peng; Jianbin Lai; Chengwei Yang
Journal:  Plant Cell       Date:  2022-09-27       Impact factor: 12.085

4.  Functional Diversification of Replication Protein A Paralogs and Telomere Length Maintenance in Arabidopsis.

Authors:  Behailu B Aklilu; François Peurois; Carole Saintomé; Kevin M Culligan; Daniela Kobbe; Catherine Leasure; Michael Chung; Morgan Cattoor; Ryan Lynch; Lauren Sampson; John Fatora; Dorothy E Shippen
Journal:  Genetics       Date:  2020-06-12       Impact factor: 4.562

Review 5.  Revisiting regulatory roles of replication protein A in plant DNA metabolism.

Authors:  Supriyo Chowdhury; Arpita Basu Chowdhury; Manish Kumar; Supriya Chakraborty
Journal:  Planta       Date:  2021-05-28       Impact factor: 4.116

6.  Characterization of DNA Repair Foci in Root Cells of Arabidopsis in Response to DNA Damage.

Authors:  Takeshi Hirakawa; Sachihiro Matsunaga
Journal:  Front Plant Sci       Date:  2019-07-30       Impact factor: 5.753

Review 7.  Challenges and Perspectives in Homology-Directed Gene Targeting in Monocot Plants.

Authors:  Tien Van Vu; Yeon Woo Sung; Jihae Kim; Duong Thi Hai Doan; Mil Thi Tran; Jae-Yean Kim
Journal:  Rice (N Y)       Date:  2019-12-19       Impact factor: 4.783

8.  Disruption of a ∼23-24 nucleotide small RNA pathway elevates DNA damage responses in Tetrahymena thermophila.

Authors:  Suzanne R Lee; Daniel A Pollard; Domenico F Galati; Megan L Kelly; Brian Miller; Christina Mong; Megan N Morris; Kerry Roberts-Nygren; Geoffrey M Kapler; Matthew Zinkgraf; Hung Q Dang; Erica Branham; Jason Sasser; Erin Tessier; Courtney Yoshiyama; Maya Matsumoto; Gaea Turman
Journal:  Mol Biol Cell       Date:  2021-05-19       Impact factor: 4.138

  8 in total

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