Literature DB >> 34047822

Revisiting regulatory roles of replication protein A in plant DNA metabolism.

Supriyo Chowdhury1, Arpita Basu Chowdhury1, Manish Kumar1, Supriya Chakraborty2.   

Abstract

MAIN
CONCLUSION: This review provides insight into the roles of heterotrimeric RPA protein complexes encompassing all aspects of DNA metabolism in plants along with specific function attributed by individual subunits. It highlights research gaps that need further attention. Replication protein A (RPA), a heterotrimeric protein complex partakes in almost every aspect of DNA metabolism in eukaryotes with its principle role being a single-stranded DNA-binding protein, thereby providing stability to single-stranded (ss) DNA. Although most of our knowledge of RPA structure and its role in DNA metabolism is based on studies in yeast and animal system, in recent years, plants have also been reported to have diverse repertoire of RPA complexes (formed by combination of different RPA subunit homologs arose during course of evolution), expected to be involved in plethora of DNA metabolic activities. Here, we have reviewed all studies regarding role of RPA in DNA metabolism in plants. As combination of plant RPA complexes may vary largely depending on number of homologs of each subunit, next step for plant biologists is to develop specific functional methods for detailed analysis of biological roles of these complexes, which we have tried to formulate in our review. Besides, complete absence of any study regarding regulatory role of posttranslational modification of RPA complexes in DNA metabolism in plants, prompts us to postulate a hypothetical model of same in light of information from animal system. With our review, we envisage to stimulate the RPA research in plants to shift its course from descriptive to functional studies, thereby bringing a new angle of studying dynamic DNA metabolism in plants.

Entities:  

Keywords:  DNA damage response; Plant DNA metabolism; Post-translational modification; Recombination; Replication; Replication protein A

Mesh:

Substances:

Year:  2021        PMID: 34047822     DOI: 10.1007/s00425-021-03641-0

Source DB:  PubMed          Journal:  Planta        ISSN: 0032-0935            Impact factor:   4.116


  67 in total

1.  Functional dynamics in replication protein A DNA binding and protein recruitment domains.

Authors:  Chris A Brosey; Sarah E Soss; Sonja Brooks; Chunli Yan; Ivaylo Ivanov; Kavita Dorai; Walter J Chazin
Journal:  Structure       Date:  2015-05-21       Impact factor: 5.006

2.  The crystal structure of the complex of replication protein A subunits RPA32 and RPA14 reveals a mechanism for single-stranded DNA binding.

Authors:  A Bochkarev; E Bochkareva; L Frappier; A M Edwards
Journal:  EMBO J       Date:  1999-08-16       Impact factor: 11.598

3.  Function of a conserved checkpoint recruitment domain in ATRIP proteins.

Authors:  Heather L Ball; Mark R Ehrhardt; Daniel A Mordes; Gloria G Glick; Walter J Chazin; David Cortez
Journal:  Mol Cell Biol       Date:  2007-03-05       Impact factor: 4.272

Review 4.  Mitotic crisis: the unmasking of a novel role for RPA.

Authors:  Rachel William Anantha; James A Borowiec
Journal:  Cell Cycle       Date:  2009-02-21       Impact factor: 4.534

Review 5.  Replication protein A: single-stranded DNA's first responder: dynamic DNA-interactions allow replication protein A to direct single-strand DNA intermediates into different pathways for synthesis or repair.

Authors:  Ran Chen; Marc S Wold
Journal:  Bioessays       Date:  2014-08-29       Impact factor: 4.345

6.  Replication protein A (RPA1a) is required for meiotic and somatic DNA repair but is dispensable for DNA replication and homologous recombination in rice.

Authors:  Yuxiao Chang; Liang Gong; Wenya Yuan; Xingwang Li; Guoxing Chen; Xianghua Li; Qifa Zhang; Changyin Wu
Journal:  Plant Physiol       Date:  2009-10-07       Impact factor: 8.340

7.  The phosphorylation domain of the 32-kDa subunit of replication protein A (RPA) modulates RPA-DNA interactions. Evidence for an intersubunit interaction.

Authors:  Sara K Binz; Ye Lao; David F Lowry; Marc S Wold
Journal:  J Biol Chem       Date:  2003-06-20       Impact factor: 5.157

8.  RPA phosphorylation facilitates mitotic exit in response to mitotic DNA damage.

Authors:  Rachel William Anantha; Elena Sokolova; James A Borowiec
Journal:  Proc Natl Acad Sci U S A       Date:  2008-08-22       Impact factor: 11.205

9.  SOG1 activator and MYB3R repressors regulate a complex DNA damage network in Arabidopsis.

Authors:  Clara Bourbousse; Neeraja Vegesna; Julie A Law
Journal:  Proc Natl Acad Sci U S A       Date:  2018-12-12       Impact factor: 11.205

10.  A new structural framework for integrating replication protein A into DNA processing machinery.

Authors:  Chris A Brosey; Chunli Yan; Susan E Tsutakawa; William T Heller; Robert P Rambo; John A Tainer; Ivaylo Ivanov; Walter J Chazin
Journal:  Nucleic Acids Res       Date:  2013-01-08       Impact factor: 16.971

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Journal:  Theor Appl Genet       Date:  2022-09-04       Impact factor: 5.574

2.  Physiologic Targets and Modes of Action for CBL0137, a Lead for Human African Trypanosomiasis Drug Development.

Authors:  Carlos E Sanz-Rodriguez; Benjamin Hoffman; Paul J Guyett; Andrei Purmal; Baljinder Singh; Michael Pollastri; Kojo Mensa-Wilmot
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