| Literature DB >> 28127430 |
Steffen Koerdt1, Nadine Tanner1, Niklas Rommel1, Nils H Rohleder1, Gesche Frohwitter1, Oliver Ristow2, Klaus-Dietrich Wolff1, Marco R Kesting1.
Abstract
BACKGROUND: Essential molecular pathways such as the MAPK pathway, NO system, or the influence of PIK3CA as an oncogene are known to regulate fundamental signalling networks. However, few knowledge about their role in the occurrence of wound healing disorders (WHD) following radiation therapy (RT) exists. This study aims to evaluate the expression profiles of specific molecular pathway marker genes.Entities:
Keywords: MAPK; NOS; PCR; PIK3CA; Radiation therapy
Year: 2017 PMID: 28127430 PMCID: PMC5251289 DOI: 10.1186/s40364-017-0084-9
Source DB: PubMed Journal: Biomark Res ISSN: 2050-7771
Primer sequences of examined genes
| Gene | Sequence 5’to 3 | |
|---|---|---|
| MAPK | Forward | CAGTGGGATGGAATTGAAAG |
| Reverse | AGCAGAAGGAATGAGTGTGC | |
| NOS1 | Forward | GACTGTTGAGATGGAAGAAC |
| Reverse | ATCTTCCTGTCTCCGAGGCG | |
| NOS3 | Forward | GTGATGGCGAAGCGAGTGAAG |
| Reverse | CCGAGCCCGAACACACAGAAC | |
| PIK3CA | Forward | CTCCACGACCATCATCAGG |
| Reverse | GATTACGAAGGTATTGGTT | |
Fig. 1Bar graph visualizing visualising the expression of the investigated genes MAPK in patients with and without a history of Radiation Therapy (RT) a, as well as in patients with and without the occurrence of postoperative Wound Healing Disorders (WHD) b. Expression levels of NOS1 c, d, NOS3 e, f, and PIK3CA g, h are displayed accordingly. Measured by real-time RT-PCR in cervical tissue samples. Given is the median value, with error bars indicating the 95% confidence interval (CI)
Real-time RT-PCR results in groups with/without preoperative RT and with/without postoperative cervical WHDs
| Gen | Median Expression per GAPDH | Median Expression per GAPDH | ||||
|---|---|---|---|---|---|---|
| RT | No RT | WHD | No WHD | |||
| N (%) | N (%) |
| N (%) | N (%) |
| |
| MAPK | 9.32 E-01 | 9.65 E-03 | .263 | 9.36 E-01 | 1.15 E-01 | .043* |
| 15 (50) | 15 (50) | 13 (43.3) | 17 (56.7) | |||
| NOS1 | 6.65 E-05 | 5.86 E + 14 | .178 | 7.67 E-05 | 5.173 E + 14 | .241 |
| 15 (50) | 15 (50) | 13 (43.3) | 17 (56.7) | |||
| NOS3 | 9.66 E-04 | 7.77 E-04 | .089 | 9.86 E-04 | 7.84 E-04 | .680 |
| 15 (50) | 15 (50) | 13 (43.3) | 17 (56.7) | |||
| PIK3CA | 1.99 E + 17 | 2.16 E + 06 | .049* | 6.48 E + 03 | 1.76 E + 17 | .391 |
| 15 (50) | 15 (50) | 13 (43.3) | 17 (56.7) | |||
Abbreviations: WHD wound healing disorder; RT radiation therapy; RT-PCR reverse-transcription polymerase chain reaction
Data in parentheses are percentages, unless noted otherwise; *statistically significant difference at α = 0.05