Literature DB >> 28070163

Development of Reverse Transcription Loop-Mediated Isothermal Amplification for Simple and Rapid Detection of Promyelocytic Leukemia-Retinoic Acid Receptor α mRNA.

Yuki Hashimoto1, Yuki Hatayama1, Nao Kojima1, Shota Morishita1, Satoko Matsumoto1, Yuzuru Hosoda2, Ayako Hara1, Toru Motokura3.   

Abstract

BACKGROUND: Acute promyelocytic leukemia (APL) is a disease characterized by expression of Promyelocytic Leukemia-Retinoic Acid Receptor α (PML-RARα) chimeric mRNA. Although APL is curable, early death due to hemorrhage is a major problem. Here, we report the development of a simple and rapid diagnostic method for APL based on reverse transcription loop-mediated isothermal amplification (RT-LAMP).
METHODS: An RT-LAMP primer set was designed to detect three types of PML-RARα mRNA in a single reaction. Serial dilutions of plasmid DNA containing bcr1, bcr2, or bcr3 PML-RARα sequences and RNA extracted from bone marrow aspirates of 6 patients with APL were used to compare the results of RT-LAMP and nested PCR assays.
RESULTS: Plasmid DNA was amplified by RT-LAMP, for which the reaction time was > 4 h shorter and the lower detection limit was higher than for nested RT-PCR. Six of 7 samples tested positive by both methods.
CONCLUSION: We developed an RT-LAMP assay for simple and rapid PML-RARα mRNA detection that may be clinically useful for point-of-care testing and APL diagnosis.

Entities:  

Keywords:  Promyelocytic Leukemia–Retinoic Acid Receptor α; acute promyelocytic leukemia; polymerase chain reaction; reverse transcription loop-mediated isothermal amplification; t(15;17) chromosome translocation

Year:  2016        PMID: 28070163      PMCID: PMC5214692     

Source DB:  PubMed          Journal:  Yonago Acta Med        ISSN: 0513-5710            Impact factor:   1.641


  23 in total

1.  Loop-mediated isothermal amplification of DNA.

Authors:  T Notomi; H Okayama; H Masubuchi; T Yonekawa; K Watanabe; N Amino; T Hase
Journal:  Nucleic Acids Res       Date:  2000-06-15       Impact factor: 16.971

2.  Detection of loop-mediated isothermal amplification reaction by turbidity derived from magnesium pyrophosphate formation.

Authors:  Y Mori; K Nagamine; N Tomita; T Notomi
Journal:  Biochem Biophys Res Commun       Date:  2001-11-23       Impact factor: 3.575

3.  Accelerated reaction by loop-mediated isothermal amplification using loop primers.

Authors:  K Nagamine; T Hase; T Notomi
Journal:  Mol Cell Probes       Date:  2002-06       Impact factor: 2.365

Review 4.  Loop-mediated isothermal amplification of DNA (LAMP): a new diagnostic tool lights the world of diagnosis of animal and human pathogens: a review.

Authors:  Kuldeep Dhama; K Karthik; Sandip Chakraborty; Ruchi Tiwari; Sanjay Kapoor; Amit Kumar; Prasad Thomas
Journal:  Pak J Biol Sci       Date:  2014-01-15

Review 5.  Standardized RT-PCR analysis of fusion gene transcripts from chromosome aberrations in acute leukemia for detection of minimal residual disease. Report of the BIOMED-1 Concerted Action: investigation of minimal residual disease in acute leukemia.

Authors:  J J van Dongen; E A Macintyre; J A Gabert; E Delabesse; V Rossi; G Saglio; E Gottardi; A Rambaldi; G Dotti; F Griesinger; A Parreira; P Gameiro; M G Diáz; M Malec; A W Langerak; J F San Miguel; A Biondi
Journal:  Leukemia       Date:  1999-12       Impact factor: 11.528

Review 6.  Acute promyelocytic leukemia: from highly fatal to highly curable.

Authors:  Zhen-Yi Wang; Zhu Chen
Journal:  Blood       Date:  2008-03-01       Impact factor: 22.113

7.  Demonstration of a very inexpensive, turbidimetric, real-time, RT-LAMP detection platform using shrimp Laem-Singh virus (LSNV) as a model.

Authors:  Narong Arunrut; Rungkarn Suebsing; Boonsirm Withyachumnarnkul; Wansika Kiatpathomchai
Journal:  PLoS One       Date:  2014-09-25       Impact factor: 3.240

8.  Reverse transcription-loop-mediated isothermal amplification for the detection of rodent coronaviruses.

Authors:  Ken-Ichi Hanaki; Fumio Ike; Rika Hatakeyama; Norio Hirano
Journal:  J Virol Methods       Date:  2012-10-30       Impact factor: 2.014

9.  Establishment of reverse transcription loop-mediated isothermal amplification for rapid detection and differentiation of canine distemper virus infected and vaccinated animals.

Authors:  Da-Fei Liu; Chun-Guo Liu; Jin Tian; Yi-Tong Jiang; Xiao-Zhan Zhang; Hong-Liang Chai; Tian-Kuo Yang; Xiu-Chen Yin; Hong-Ying Zhang; Ming Liu; Yu-Ping Hua; Lian-Dong Qu
Journal:  Infect Genet Evol       Date:  2015-03-10       Impact factor: 3.342

10.  Reverse transcription loop-mediated isothermal amplification for rapid and quantitative assay of covert mortality nodavirus in shrimp.

Authors:  Qingli Zhang; Shuang Liu; Haolin Yang; Luoluo Zhu; Xiaoyuan Wan; Xiaoping Li; Jie Huang
Journal:  J Invertebr Pathol       Date:  2015-09-09       Impact factor: 2.841

View more
  3 in total

1.  Meeting the needs of CML patients in resource-poor countries.

Authors:  Hemant Malhotra; Jerald Radich; Pat Garcia-Gonzalez
Journal:  Hematology Am Soc Hematol Educ Program       Date:  2019-12-06

Review 2.  Precision Medicine in Low- and Middle-Income Countries.

Authors:  Jerald P Radich; Edward Briercheck; Daniel T Chiu; Manoj P Menon; Olga Sala Torra; Cecilia C S Yeung; Edus H Warren
Journal:  Annu Rev Pathol       Date:  2022-01-24       Impact factor: 32.350

Review 3.  Access to Therapy for Acute Myeloid Leukemia in the Developing World: Barriers and Solutions.

Authors:  Luis Antonio Meillon-Garcia; Roberta Demichelis-Gómez
Journal:  Curr Oncol Rep       Date:  2020-10-06       Impact factor: 5.075

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.