Literature DB >> 28066157

Support Vector Hazards Machine: A Counting Process Framework for Learning Risk Scores for Censored Outcomes.

Yuanjia Wang1, Tianle Chen2, Donglin Zeng3.   

Abstract

Learning risk scores to predict dichotomous or continuous outcomes using machine learning approaches has been studied extensively. However, how to learn risk scores for time-to-event outcomes subject to right censoring has received little attention until recently. Existing approaches rely on inverse probability weighting or rank-based regression, which may be inefficient. In this paper, we develop a new support vector hazards machine (SVHM) approach to predict censored outcomes. Our method is based on predicting the counting process associated with the time-to-event outcomes among subjects at risk via a series of support vector machines. Introducing counting processes to represent time-to-event data leads to a connection between support vector machines in supervised learning and hazards regression in standard survival analysis. To account for different at risk populations at observed event times, a time-varying offset is used in estimating risk scores. The resulting optimization is a convex quadratic programming problem that can easily incorporate non-linearity using kernel trick. We demonstrate an interesting link from the profiled empirical risk function of SVHM to the Cox partial likelihood. We then formally show that SVHM is optimal in discriminating covariate-specific hazard function from population average hazard function, and establish the consistency and learning rate of the predicted risk using the estimated risk scores. Simulation studies show improved prediction accuracy of the event times using SVHM compared to existing machine learning methods and standard conventional approaches. Finally, we analyze two real world biomedical study data where we use clinical markers and neuroimaging biomarkers to predict age-at-onset of a disease, and demonstrate superiority of SVHM in distinguishing high risk versus low risk subjects.

Entities:  

Keywords:  early disease detection; neuroimaging biomarkers; risk bound; risk prediction; support vector machine; survival analysis

Year:  2016        PMID: 28066157      PMCID: PMC5210213     

Source DB:  PubMed          Journal:  J Mach Learn Res        ISSN: 1532-4435            Impact factor:   3.654


  14 in total

Review 1.  Using Support Vector Machine to identify imaging biomarkers of neurological and psychiatric disease: a critical review.

Authors:  Graziella Orrù; William Pettersson-Yeo; Andre F Marquand; Giuseppe Sartori; Andrea Mechelli
Journal:  Neurosci Biobehav Rev       Date:  2012-01-28       Impact factor: 8.989

2.  Support vector methods for survival analysis: a comparison between ranking and regression approaches.

Authors:  Vanya Van Belle; Kristiaan Pelckmans; Sabine Van Huffel; Johan A K Suykens
Journal:  Artif Intell Med       Date:  2011-08-06       Impact factor: 5.326

3.  Additive survival least-squares support vector machines.

Authors:  V Van Belle; K Pelckmans; J A K Suykens; S Van Huffel
Journal:  Stat Med       Date:  2010-01-30       Impact factor: 2.373

Review 4.  Cognitive impairment in Huntington disease: diagnosis and treatment.

Authors:  Jane S Paulsen
Journal:  Curr Neurol Neurosci Rep       Date:  2011-10       Impact factor: 5.081

5.  A novel gene containing a trinucleotide repeat that is expanded and unstable on Huntington's disease chromosomes. The Huntington's Disease Collaborative Research Group.

Authors: 
Journal:  Cell       Date:  1993-03-26       Impact factor: 41.582

6.  Analysis of survival data by the proportional odds model.

Authors:  S Bennett
Journal:  Stat Med       Date:  1983 Apr-Jun       Impact factor: 2.373

7.  Ways toward an early diagnosis in Alzheimer's disease: the Alzheimer's Disease Neuroimaging Initiative (ADNI).

Authors:  Susanne G Mueller; Michael W Weiner; Leon J Thal; Ronald C Petersen; Clifford R Jack; William Jagust; John Q Trojanowski; Arthur W Toga; Laurel Beckett
Journal:  Alzheimers Dement       Date:  2005-07       Impact factor: 21.566

8.  Risk of Cardiovascular Disease from Cumulative Cigarette Use and the Impact of Smoking Intensity.

Authors:  Jay H Lubin; David Couper; Pamela L Lutsey; Mark Woodward; Hiroshi Yatsuya; Rachel R Huxley
Journal:  Epidemiology       Date:  2016-05       Impact factor: 4.822

9.  Targeted Local Support Vector Machine for Age-Dependent Classification.

Authors:  Tianle Chen; Yuanjia Wang; Huaihou Chen; Karen Marder; Donglin Zeng
Journal:  J Am Stat Assoc       Date:  2014-09-01       Impact factor: 5.033

10.  The Atherosclerosis Risk in Communities (ARIC) Study: design and objectives. The ARIC investigators.

Authors: 
Journal:  Am J Epidemiol       Date:  1989-04       Impact factor: 4.897

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  1 in total

1.  Lasso regularization for left-censored Gaussian outcome and high-dimensional predictors.

Authors:  Perrine Soret; Marta Avalos; Linda Wittkop; Daniel Commenges; Rodolphe Thiébaut
Journal:  BMC Med Res Methodol       Date:  2018-12-04       Impact factor: 4.615

  1 in total

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