Literature DB >> 28042044

Consecutive Elongation of D-Amino Acids in Translation.

Takayuki Katoh1, Kenya Tajima2, Hiroaki Suga3.   

Abstract

Recent progress in the field of genetic code reprogramming using a reconstituted cell-free translation system has made it possible to incorporate a wide array of non-proteinogenic amino acids, including N-methyl-amino acids and D-amino acids. Despite the fact that up to ten N-methyl-amino acid residues can be continuously elongated, the successive incorporation of even two D-amino acids into a nascent peptide chain remains a formidable challenge, thus far being nearly impossible. Here we report achievement of continuous D-amino acid elongation by the use of engineered tRNAs and optimized concentrations of translation factors, enabling us to incorporate up to ten consecutive D-Ser residues into a nascent peptide chain. We have also expressed macrocyclic peptides consisting of four or five consecutive D-amino acids consisting of D-Phe, D-Ser, D-Ala, or D-Cys closed by either a disulfide bond or a thioether bond.
Copyright © 2017 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  D-amino acid; cyclic peptide; genetic code reprogramming; peptide; ribosome; tRNA; translation

Mesh:

Substances:

Year:  2016        PMID: 28042044     DOI: 10.1016/j.chembiol.2016.11.012

Source DB:  PubMed          Journal:  Cell Chem Biol        ISSN: 2451-9448            Impact factor:   8.116


  23 in total

Review 1.  tRNA engineering for manipulating genetic code.

Authors:  Takayuki Katoh; Yoshihiko Iwane; Hiroaki Suga
Journal:  RNA Biol       Date:  2017-09-06       Impact factor: 4.652

Review 2.  Upgrading aminoacyl-tRNA synthetases for genetic code expansion.

Authors:  Oscar Vargas-Rodriguez; Anastasia Sevostyanova; Dieter Söll; Ana Crnković
Journal:  Curr Opin Chem Biol       Date:  2018-07-27       Impact factor: 8.822

Review 3.  Aligator: A computational tool for optimizing total chemical synthesis of large proteins.

Authors:  Michael T Jacobsen; Patrick W Erickson; Michael S Kay
Journal:  Bioorg Med Chem       Date:  2017-06-03       Impact factor: 3.641

4.  d-Amino Acid-Mediated Translation Arrest Is Modulated by the Identity of the Incoming Aminoacyl-tRNA.

Authors:  Rachel C Fleisher; Virginia W Cornish; Ruben L Gonzalez
Journal:  Biochemistry       Date:  2018-07-12       Impact factor: 3.162

Review 5.  Chiral checkpoints during protein biosynthesis.

Authors:  Santosh Kumar Kuncha; Shobha P Kruparani; Rajan Sankaranarayanan
Journal:  J Biol Chem       Date:  2019-10-07       Impact factor: 5.157

6.  Expanding the Scope of Protein Synthesis Using Modified Ribosomes.

Authors:  Larisa M Dedkova; Sidney M Hecht
Journal:  J Am Chem Soc       Date:  2019-04-05       Impact factor: 15.419

Review 7.  Biochemistry of Aminoacyl tRNA Synthetase and tRNAs and Their Engineering for Cell-Free and Synthetic Cell Applications.

Authors:  Ragunathan Bava Ganesh; Sebastian J Maerkl
Journal:  Front Bioeng Biotechnol       Date:  2022-07-01

Review 8.  Repurposing ribosomes for synthetic biology.

Authors:  Yi Liu; Do Soon Kim; Michael C Jewett
Journal:  Curr Opin Chem Biol       Date:  2017-09-01       Impact factor: 8.822

9.  Mechanistic studies of non-canonical amino acid mutagenesis.

Authors:  Rachel C Fleisher; Nina Michael; Ruben L Gonzalez
Journal:  Methods Enzymol       Date:  2021-06-24       Impact factor: 1.682

10.  Expanding the Chemical Diversity of Genetically Encoded Libraries.

Authors:  Sabrina E Iskandar; Victoria A Haberman; Albert A Bowers
Journal:  ACS Comb Sci       Date:  2020-11-09       Impact factor: 3.903

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.