| Literature DB >> 28018430 |
Wenli Song1, Xian'e Wang1, Yu Tian2, Xin Zhang3, Ruifang Lu1, Huanxin Meng1.
Abstract
Objective. To explore whether GC (group-specific component) rs17467825, rs4588, and rs7041 polymorphisms are associated with generalized aggressive periodontitis. Methods. This case-control study recruited 372 patients with generalized aggressive periodontitis (group AgP) and 133 periodontal healthy subjects (group HP). GC rs17467825, rs4588, and rs7041 genotypes and plasmatic vitamin D-binding protein (DBP) were measured. Analysis of single SNP and multiple SNPs was performed and relevance between plasmatic DBP and haplotypes was analyzed. Results. GC rs17467825 GG genotype was statistically associated with lower risk for generalized aggressive periodontitis under the recessive model (OR = 0.52, 95% CI: 0.30-0.92, p = 0.028). GC rs17467825 and rs4588 had strong linkage disequilibrium with r2 ≥ 0.8 and D' ≥ 0.8. Haplotype (GC rs17467825, rs4588) GC was associated with the less risk for generalized aggressive periodontitis (OR = 0.29, 95% CI: 0.09-0.96, p = 0.043). In group AgP, individuals with combined genotype (GC rs17467825, rs4588) AG+CA had significantly lower plasmatic DBP level than those with the other two combined genotypes (AG+CA versus AA+CC p = 0.007; AG+CA versus GG+AA p = 0.026). Conclusions. GC rs17467825 genotype GG and haplotype (GC rs17467825, rs4588) GC are associated with generalized aggressive periodontitis. The association may be acquired through regulating DBP levels. The functions of GC gene and DBP in inflammatory disease need to be further studied.Entities:
Year: 2016 PMID: 28018430 PMCID: PMC5149651 DOI: 10.1155/2016/5141089
Source DB: PubMed Journal: Int J Endocrinol ISSN: 1687-8337 Impact factor: 3.257
Basic characteristics of the study population.
| Total | Group HP | Group AgP |
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| Sample size | 505 | 133 | 372 | — |
| Agea | 27.83 ± 5.79 | 28.77 ± 7.04 | 27.50 ± 5.24 | 0.058 |
| Male/female | 205/300 | 53/80 | 152/220 | 0.839 |
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| DBP ( | 191.25 ± 74.69 | 110.96 ± 21.47 | 238.89 ± 49.89 |
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AgP: aggressive periodontitis; HP: healthy participant; DBP: vitamin D-binding protein; PD: probing depth; AL: clinical attachment loss. aData were presented as mean ± SD. Analyzed by Student's t-test for continuous variable and by Pearson's chi-square test for categorical variable.
Genotype distributions of GC rs17467825, rs4588, and rs7041 polymorphisms in the inheritance models.
| Model | Genotypes | Group HP | Group AgP | Adjusted OR (95% CI) | Adjusted | AIC | BIC |
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| Codominant | A/A | 62 (48.4%) | 170 (46.8%) | 1 | 0.040 | 564.8 | 581.6 |
| A/G | 43 (33.6%) | 156 (43%) | 1.33 (0.85–2.08) | ||||
| G/G | 23 (18%) | 37 (10.2%) | 0.59 (0.33–1.08) | ||||
| Dominant | A/A | 62 (48.4%) | 170 (46.8%) | 1 | 0.730 | 569.1 | 581.7 |
| A/G-G/G | 66 (51.6%) | 193 (53.2%) | 1.07 (0.72–1.61) | ||||
| Recessive | A/A-A/G | 105 (82%) | 326 (89.8%) |
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| 564.4 | 577 |
| G/G | 23 (18%) | 37 (10.2%) |
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| Overdominant | A/A-G/G | 85 (66.4%) | 207 (57%) | 1 | 0.059 | 565.7 | 578.3 |
| A/G | 43 (33.6%) | 156 (43%) | 1.49 (0.98–2.28) | ||||
| Log-additive | — | — | — | 0.88 (0.66–1.18) | 0.410 | 568.6 | 581.1 |
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| Codominant | C/C | 65 (49.2%) | 168 (45.6%) | 1.00 | 0.190 | 581.9 | 598.7 |
| C/A | 48 (36.4%) | 163 (44.3%) | 1.32 (0.86–2.03) | ||||
| A/A | 19 (14.4%) | 37 (10.1%) | 0.76 (0.40–1.41) | ||||
| Dominant | C/C | 65 (49.2%) | 168 (45.6%) | 1.00 | 0.470 | 582.7 | 595.3 |
| C/A-A/A | 67 (50.8%) | 200 (54.4%) | 1.16 (0.78–1.73) | ||||
| Recessive | C/C-C/A | 113 (85.6%) | 331 (90%) | 1.00 | 0.190 | 581.4 | 594.1 |
| A/A | 19 (14.4%) | 37 (10.1%) | 0.67 (0.37–1.20) | ||||
| Overdominant | C/C-A/A | 84 (63.6%) | 205 (55.7%) | 1.00 | 0.110 | 580.6 | 593.3 |
| C/A | 48 (36.4%) | 163 (44.3%) | 1.39 (0.93–2.10) | ||||
| Log-additive | — | — | — | 0.99 (0.73–1.32) | 0.920 | 583.2 | 595.8 |
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| Codominant | T/T | 68 (51.9%) | 190 (52%) | 1.00 | 0.970 | 580.6 | 597.5 |
| G/T | 54 (41.2%) | 152 (41.6%) | 1.01 (0.66–1.53) | ||||
| G/G | 9 (6.9%) | 23 (6.3%) | 0.92 (0.40–2.08) | ||||
| Dominant | T/T | 68 (51.9%) | 190 (52%) | 1.00 | 0.980 | 578.7 | 591.3 |
| G/T-G/G | 63 (48.1%) | 175 (48%) | 0.99 (0.67–1.48) | ||||
| Recessive | T/T-G/T | 122 (93.1%) | 342 (93.7%) | 1.00 | 0.820 | 578.6 | 591.3 |
| G/G | 9 (6.9%) | 23 (6.3%) | 0.91 (0.41–2.03) | ||||
| Overdominant | T/T-G/G | 77 (58.8%) | 213 (58.4%) | 1.00 | 0.930 | 578.7 | 591.3 |
| G/T | 54 (41.2%) | 152 (41.6%) | 1.02 (0.68–1.53) | ||||
| Log-additive | — | — | — | 0.98 (0.71–1.36) | 0.910 | 578.7 | 591.3 |
AgP: aggressive periodontitis; HP: healthy participant; OR: odds ratio; 95% CI: 95% confidence interval; AIC: Akaike's information criterion; BIC: Bayesian information criterion; HWE: Hardy Weinberg equilibrium; adjusted p: adjusted by age and gender; p < 0.05: statistical significance.
Figure 1Linkage disequilibrium analysis of DBP SNPs. (a) represents LD analysis in group AgP and (b) represents the result in group HP. The values in the diamonds represent the r 2 and D′ values.
Haplotype analysis of GC rs17467825, rs4588, and rs7041 polymorphisms and their association with generalized aggressive periodontitis.
| Haplotypes | Haplotype frequency | OR (95% CI) | Adjusted | ||||
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| rs17467825 | rs4588 | Total | Group HP | Group AgP | |||
| 1 | A | C | 0.6664 | 0.6509 | 0.6719 | 1 | — |
| 2 | G | A | 0.3161 | 0.3258 | 0.3127 | 0.95 (0.70–1.28) | 0.74 |
| 3 | G | C | 0.0112 | 0.0234 | 0.0069 |
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| 4 | A | A | 0.0062 | 0.0084 | NA | — | — |
AgP: aggressive periodontitis; HP: healthy participant; OR: odds ratio; 95% CI: 95% confidence interval; NA: not analyzed; adjusted p: adjusted by age and gender; p < 0.05: statistical significance.
Combined genotype distributions in different groups a.
| rs17467825 | rs4588 | All participants | Participants with DBP measured | ||||
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| Total | HP | AgP | Total | HP | AgP | ||
| AA | CC | 228 (46.53%) | 62 (48.44%) | 166 (45.86%) | 67 (46.21%) | 21 (38.89%) | 46 (50.55%) |
| AG | CA | 193 (39.39%) | 41 (32.03%) | 152 (41.99%) | 54 (37.24%) | 20 (37.04%) | 34 (37.36%) |
| GG | AA | 53 (10.82%) | 19 (14.84%) | 34 (9.39%) | 15 (10.34%) | 9 (16.67%) | 6 (6.60%) |
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| 16 (3.26%) | 6 (4.69%) | 10 (2.76%) | 9 (6.21%) | 4 (7.40%) | 5 (5.49%) |
AgP: aggressive periodontitis; HP: healthy participant; DBP: vitamin D-binding protein; combined genotypes with genotype frequency ≤0.01 were not displayed, including (GC rs17467825, rs4588) AA+CA, AA+AA, AG+CC, AG+AA, GG+CC, and GG+CA; adata were presented as N (%).
Figure 2Plasmatic DBP level comparison between individuals with different combined genotypes. AgP: aggressive periodontitis; HP: healthy participant; DBP: vitamin D-binding protein; p < 0.05: statistical significance.